RNA–Protein interactions for RNA: ENSMUST00000038188.13

Limch1-201, Transcript of LIM and calponin homology domains-containing protein 1, mousemouse

TSL 1 (best) BASIC

Gene Limch1, Length 5,903 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Limch1-201ENSMUST00000038188 Itga6Q61739 1091 aa12.56□□□□□ -0.4
Limch1-201ENSMUST00000038188 Brf1Q8CFK2 676 aa12.56□□□□□ -0.4
Limch1-201ENSMUST00000038188 Rbm19Q8R3C6 952 aaKnown RBP12.56□□□□□ -0.4
Limch1-201ENSMUST00000038188 Uggt2E9Q4X2 1504 aa12.56□□□□□ -0.4
Limch1-201ENSMUST00000038188 Kdm3aQ6PCM1 1323 aa12.56□□□□□ -0.4
Limch1-201ENSMUST00000038188 Arhgap33Q80YF9 1305 aa12.56□□□□□ -0.4
Limch1-201ENSMUST00000038188 Csrnp1P59054 583 aa12.56□□□□□ -0.4
Limch1-201ENSMUST00000038188 St18Q80TY4 1045 aa12.56□□□□□ -0.4
Limch1-201ENSMUST00000038188 MthfsQ9D110 203 aa12.56□□□□□ -0.4
Limch1-201ENSMUST00000038188 MvpQ9EQK5 861 aa12.56□□□□□ -0.4
Limch1-201ENSMUST00000038188 Erich3F6QRE9 1637 aa12.56□□□□□ -0.4
Limch1-201ENSMUST00000038188 Myom2Q14BI5 1463 aa12.56□□□□□ -0.4
Limch1-201ENSMUST00000038188 Spata18Q0P557 537 aa12.56□□□□□ -0.4
Limch1-201ENSMUST00000038188 Gja3Q64448 417 aa12.56□□□□□ -0.4
Limch1-201ENSMUST00000038188 Hecw1Q8K4P8 1604 aa12.56□□□□□ -0.4
Limch1-201ENSMUST00000038188 Kif23E9Q5G3 953 aa12.56□□□□□ -0.4
Limch1-201ENSMUST00000038188 Rnf216P58283 853 aa12.56□□□□□ -0.4
Limch1-201ENSMUST00000038188 Ccdc129Q14B48 1034 aa12.56□□□□□ -0.4
Limch1-201ENSMUST00000038188 Larp1Q6ZQ58 1072 aaKnown RBP12.56□□□□□ -0.4
Limch1-201ENSMUST00000038188 Matr3Q8K310 846 aaKnown RBP12.56□□□□□ -0.4
Limch1-201ENSMUST00000038188 Ppp1r42Q8R1Z4 357 aa12.56□□□□□ -0.4
Limch1-201ENSMUST00000038188 Gdf11Q9Z1W4 405 aa12.56□□□□□ -0.4
Limch1-201ENSMUST00000038188 Nid2O88322 1403 aa12.56□□□□□ -0.4
Limch1-201ENSMUST00000038188 Pde4aO89084 844 aa12.55□□□□□ -0.4
Limch1-201ENSMUST00000038188 Robo2Q7TPD3 1470 aa12.55□□□□□ -0.4
Limch1-201ENSMUST00000038188 Ddx31Q6NZQ2 687 aaKnown RBP12.55□□□□□ -0.4
Limch1-201ENSMUST00000038188 FancaQ9JL70 1439 aa12.55□□□□□ -0.4
Limch1-201ENSMUST00000038188 Pik3r4Q8VD65 1358 aa12.55□□□□□ -0.4
Limch1-201ENSMUST00000038188 Nphp3Q7TNH6 1325 aa12.55□□□□□ -0.4
Limch1-201ENSMUST00000038188 Vars2Q3U2A8 1060 aa12.55□□□□□ -0.4
Limch1-201ENSMUST00000038188 Fam83gQ5SWY7 812 aa12.55□□□□□ -0.4
Limch1-201ENSMUST00000038188 Pram1Q6BCL1 675 aa12.55□□□□□ -0.4
Limch1-201ENSMUST00000038188 Bicc1Q99MQ1 977 aaKnown RBP12.55□□□□□ -0.4
Limch1-201ENSMUST00000038188 Smc3Q9CW03 1217 aaKnown RBP12.55□□□□□ -0.4
Limch1-201ENSMUST00000038188 Usp5P56399 858 aaKnown RBP12.55□□□□□ -0.4
Limch1-201ENSMUST00000038188 Tfcp2l1Q3UNW5 479 aa12.55□□□□□ -0.4
Limch1-201ENSMUST00000038188 Ciapin1Q8WTY4 309 aa12.55□□□□□ -0.4
Limch1-201ENSMUST00000038188 Hecw2Q6I6G8 1578 aa12.54□□□□□ -0.4
Limch1-201ENSMUST00000038188 MycP01108 439 aa12.54□□□□□ -0.4
Limch1-201ENSMUST00000038188 Prim1P20664 417 aa12.54□□□□□ -0.4
Limch1-201ENSMUST00000038188 Ncoa4Q5U4H9 625 aa12.54□□□□□ -0.4
Limch1-201ENSMUST00000038188 Jarid2Q62315 1234 aa12.54□□□□□ -0.4
Limch1-201ENSMUST00000038188 Fam170aQ66LM6 333 aa12.54□□□□□ -0.4
Limch1-201ENSMUST00000038188 Gigyf1Q99MR1 1044 aaKnown RBP12.54□□□□□ -0.4
Limch1-201ENSMUST00000038188 Cep89Q9CZX2 791 aa12.54□□□□□ -0.4
Limch1-201ENSMUST00000038188 Cap2Q9CYT6 476 aa12.54□□□□□ -0.4
Limch1-201ENSMUST00000038188 AceP09470 1312 aa12.54□□□□□ -0.4
Limch1-201ENSMUST00000038188 Kif1bQ60575 1816 aaKnown RBP12.53□□□□□ -0.4
Limch1-201ENSMUST00000038188 Ezh2Q61188 746 aaKnown RBP12.53□□□□□ -0.4
Limch1-201ENSMUST00000038188 Zmynd15Q8C0R7 736 aa12.53□□□□□ -0.4
Limch1-201ENSMUST00000038188 Lmod1Q8BVA4 595 aa12.53□□□□□ -0.4
Limch1-201ENSMUST00000038188 Cct4P80315 539 aaKnown RBP12.53□□□□□ -0.4
Limch1-201ENSMUST00000038188 Elf1Q60775 612 aa12.53□□□□□ -0.4
Limch1-201ENSMUST00000038188 Maco1Q7TQE6 664 aaKnown RBP12.53□□□□□ -0.4
Limch1-201ENSMUST00000038188 Cdan1Q8CC12 1239 aa12.53□□□□□ -0.4
Limch1-201ENSMUST00000038188 Clasp1Q80TV8 1535 aaKnown RBP12.53□□□□□ -0.4
Limch1-201ENSMUST00000038188 Dip2cE9PWR4 1557 aa12.53□□□□□ -0.4
Limch1-201ENSMUST00000038188 Kdm6aO70546 1401 aa12.52□□□□□ -0.4
Limch1-201ENSMUST00000038188 Mcm2P97310 904 aa12.52□□□□□ -0.4
Limch1-201ENSMUST00000038188 Plekhm2Q80TQ5 1018 aa12.52□□□□□ -0.4
Limch1-201ENSMUST00000038188 Eid1Q9DCR4 169 aa12.52□□□□□ -0.4
Limch1-201ENSMUST00000038188 Smarca5Q91ZW3 1051 aaKnown RBP12.52□□□□□ -0.4
Limch1-201ENSMUST00000038188 Ttc14Q9CSP9 761 aa12.52□□□□□ -0.4
Limch1-201ENSMUST00000038188 AU022751B1B0V2 589 aa12.52□□□□□ -0.41
Limch1-201ENSMUST00000038188 Srp68Q8BMA6 625 aaKnown RBP12.52□□□□□ -0.41
Limch1-201ENSMUST00000038188 Llgl2Q3TJ91 1027 aa12.52□□□□□ -0.41
Limch1-201ENSMUST00000038188 Amhr2Q8K592 568 aa12.52□□□□□ -0.41
Limch1-201ENSMUST00000038188 SkilQ60665 675 aa12.51□□□□□ -0.41
Limch1-201ENSMUST00000038188 Stx8O88983 236 aa12.51□□□□□ -0.41
Limch1-201ENSMUST00000038188 A0A1L1SQF0 893 aa12.51□□□□□ -0.41
Limch1-201ENSMUST00000038188 Prkar2bP31324 416 aa12.51□□□□□ -0.41
Limch1-201ENSMUST00000038188 Zfp444Q3TDV8 331 aaKnown RBP12.51□□□□□ -0.41
Limch1-201ENSMUST00000038188 Rab3gap1Q80UJ7 981 aa12.51□□□□□ -0.41
Limch1-201ENSMUST00000038188 Grm8P47743 908 aa12.51□□□□□ -0.41
Limch1-201ENSMUST00000038188 Usp48Q3V0C5 1052 aa12.51□□□□□ -0.41
Limch1-201ENSMUST00000038188 Ptpdc1Q6NZK8 747 aa12.51□□□□□ -0.41
Limch1-201ENSMUST00000038188 Dusp9Q7TNL7 452 aa12.51□□□□□ -0.41
Limch1-201ENSMUST00000038188 Commd10Q8JZY2 202 aa12.51□□□□□ -0.41
Limch1-201ENSMUST00000038188 Gtf2iQ9ESZ8 998 aaKnown RBP12.51□□□□□ -0.41
Limch1-201ENSMUST00000038188 Chd1P40201 1711 aa12.51□□□□□ -0.41
Limch1-201ENSMUST00000038188 Mroh2aD3Z750 1679 aa12.51□□□□□ -0.41
Limch1-201ENSMUST00000038188 Pms1Q8K119 917 aa12.5□□□□□ -0.41
Limch1-201ENSMUST00000038188 Slc1a4O35874 532 aa12.5□□□□□ -0.41
Limch1-201ENSMUST00000038188 Fsd1Q7TPM6 496 aa12.5□□□□□ -0.41
Limch1-201ENSMUST00000038188 Cchcr1Q8K2I2 770 aa12.5□□□□□ -0.41
Limch1-201ENSMUST00000038188 Hnrnpul1Q8VDM6 859 aaKnown RBP12.5□□□□□ -0.41
Limch1-201ENSMUST00000038188 Tmod4Q9JLH8 345 aa12.5□□□□□ -0.41
Limch1-201ENSMUST00000038188 Mad1l1Q9WTX8 717 aaKnown RBP12.5□□□□□ -0.41
Limch1-201ENSMUST00000038188 Sbno1Q689Z5 1390 aa12.5□□□□□ -0.41
Limch1-201ENSMUST00000038188 Kcnj4P52189 445 aa12.5□□□□□ -0.41
Limch1-201ENSMUST00000038188 NyxP83503 476 aa12.5□□□□□ -0.41
Limch1-201ENSMUST00000038188 Fam122aQ9DB52 284 aa12.5□□□□□ -0.41
Limch1-201ENSMUST00000038188 Il1rapl2Q9ERS6 686 aa12.5□□□□□ -0.41
Limch1-201ENSMUST00000038188 Slc4a4O88343 1079 aa12.5□□□□□ -0.41
Limch1-201ENSMUST00000038188 Smc2Q8CG48 1191 aaKnown RBP12.5□□□□□ -0.41
Limch1-201ENSMUST00000038188 Lmtk2Q3TYD6 1471 aa12.5□□□□□ -0.41
Limch1-201ENSMUST00000038188 Rims2Q9EQZ7 1530 aa12.5□□□□□ -0.41
Limch1-201ENSMUST00000038188 NmiO35309 314 aa12.5□□□□□ -0.41
Limch1-201ENSMUST00000038188 A0A1W2P7S8 802 aa12.49□□□□□ -0.41
Limch1-201ENSMUST00000038188 Cdc5lQ6A068 802 aaKnown RBP12.49□□□□□ -0.41
Retrieved 100 of 22,080 RNA–protein pairs in 23.4 ms