RNA–Protein interactions for RNA: ENSMUST00000028769.12

Ptpra-201, Transcript of Receptor-type tyrosine-protein phosphatase alpha, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ptpra, Length 3,227 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ptpra-201ENSMUST00000028769 Snx13Q6PHS6 957 aa21.31■■□□□ 1
Ptpra-201ENSMUST00000028769 Fmnl2A2APV2 1086 aa21.31■■□□□ 1
Ptpra-201ENSMUST00000028769 Samd1D3YXK1 519 aa21.31■■□□□ 1
Ptpra-201ENSMUST00000028769 Ddx11Q6AXC6 880 aa21.31■■□□□ 1
Ptpra-201ENSMUST00000028769 Kdm4aQ8BW72 1064 aa21.31■■□□□ 1
Ptpra-201ENSMUST00000028769 Iffo2Q8R2V2 512 aa21.31■■□□□ 1
Ptpra-201ENSMUST00000028769 Ak2Q9WTP6 239 aa21.3■■□□□ 1
Ptpra-201ENSMUST00000028769 Abcc10Q8R4P9 1501 aa21.3■■□□□ 1
Ptpra-201ENSMUST00000028769 Pnma3Q8JZW8 466 aa21.3■■□□□ 1
Ptpra-201ENSMUST00000028769 NmiO35309 314 aa21.29■■□□□ 1
Ptpra-201ENSMUST00000028769 Grm8P47743 908 aa21.29■■□□□ 1
Ptpra-201ENSMUST00000028769 GpkowQ56A08 488 aa21.29■■□□□ 1
Ptpra-201ENSMUST00000028769 PsapQ61207 557 aaKnown RBP21.29■■□□□ 1
Ptpra-201ENSMUST00000028769 Clcn1Q64347 994 aa21.29■■□□□ 1
Ptpra-201ENSMUST00000028769 MlecQ6ZQI3 291 aaKnown RBP21.29■■□□□ 1
Ptpra-201ENSMUST00000028769 Rreb1Q3UH06 1700 aaKnown RBP21.28■■□□□ 1
Ptpra-201ENSMUST00000028769 Ddx19aQ61655 478 aaKnown RBP21.28■■□□□ 1
Ptpra-201ENSMUST00000028769 Dzip1Q8BMD2 852 aa21.28■■□□□ 1
Ptpra-201ENSMUST00000028769 ScaperF8VQ70 1398 aaKnown RBP21.28■■□□□ 1
Ptpra-201ENSMUST00000028769 Irf5P56477 497 aa21.28■■□□□ 1
Ptpra-201ENSMUST00000028769 Adora1Q60612 326 aa21.28■■□□□ 1
Ptpra-201ENSMUST00000028769 Chmp7Q8R1T1 451 aa21.28■■□□□ 1
Ptpra-201ENSMUST00000028769 Q8C5K5 320 aa21.27■■□□□ 1
Ptpra-201ENSMUST00000028769 Chmp3Q9CQ10 224 aa21.27■■□□□ 1
Ptpra-201ENSMUST00000028769 Bag3Q9JLV1 577 aaKnown RBP21.27■■□□□ 1
Ptpra-201ENSMUST00000028769 Ddx46Q569Z5 1032 aaKnown RBP21.27■■□□□ 1
Ptpra-201ENSMUST00000028769 Ltv1Q6NSQ7 470 aaKnown RBP21.27■■□□□ 1
Ptpra-201ENSMUST00000028769 Ccdc7Q9D541 371 aa21.27■■□□□ 1
Ptpra-201ENSMUST00000028769 Ndufa8Q9DCJ5 172 aa21.27■□□□□ 0.99
Ptpra-201ENSMUST00000028769 Pus3Q9JI38 481 aa21.27■□□□□ 0.99
Ptpra-201ENSMUST00000028769 Vps54Q5SPW0 977 aa21.26■□□□□ 0.99
Ptpra-201ENSMUST00000028769 Wdr24Q8CFJ9 790 aa21.26■□□□□ 0.99
Ptpra-201ENSMUST00000028769 TimelessQ9R1X4 1197 aa21.26■□□□□ 0.99
Ptpra-201ENSMUST00000028769 Glipr1l2Q9CQ35 332 aa21.26■□□□□ 0.99
Ptpra-201ENSMUST00000028769 TrhQ62361 256 aa21.25■□□□□ 0.99
Ptpra-201ENSMUST00000028769 Cfap73J3QPZ5 306 aa21.25■□□□□ 0.99
Ptpra-201ENSMUST00000028769 Mindy4Q3UQI9 744 aa21.25■□□□□ 0.99
Ptpra-201ENSMUST00000028769 Ppp1r37Q8BKR5 712 aa21.25■□□□□ 0.99
Ptpra-201ENSMUST00000028769 Pik3c2aQ61194 1686 aa21.24■□□□□ 0.99
Ptpra-201ENSMUST00000028769 Zscan22Q8BGS5 496 aa21.24■□□□□ 0.99
Ptpra-201ENSMUST00000028769 Noc3lQ8VI84 807 aaKnown RBP21.24■□□□□ 0.99
Ptpra-201ENSMUST00000028769 RictorQ6QI06 1708 aa21.24■□□□□ 0.99
Ptpra-201ENSMUST00000028769 Col1a2Q01149 1372 aa21.24■□□□□ 0.99
Ptpra-201ENSMUST00000028769 Map2P20357 1828 aa21.23■□□□□ 0.99
Ptpra-201ENSMUST00000028769 Igflr1Q3U4N7 345 aa21.23■□□□□ 0.99
Ptpra-201ENSMUST00000028769 Nap1l3Q794H2 544 aa21.23■□□□□ 0.99
Ptpra-201ENSMUST00000028769 Ubr1O70481 1757 aa21.23■□□□□ 0.99
Ptpra-201ENSMUST00000028769 Gm21698A0A087WQP8 267 aa21.23■□□□□ 0.99
Ptpra-201ENSMUST00000028769 Gm21671G3UY31 267 aa21.23■□□□□ 0.99
Ptpra-201ENSMUST00000028769 Tpm2P58774 284 aa21.23■□□□□ 0.99
Ptpra-201ENSMUST00000028769 Wdr93Q402B2 695 aa21.23■□□□□ 0.99
Ptpra-201ENSMUST00000028769 Ifit1Q64282 463 aa21.23■□□□□ 0.99
Ptpra-201ENSMUST00000028769 Nup88Q8CEC0 753 aaKnown RBP21.23■□□□□ 0.99
Ptpra-201ENSMUST00000028769 Med1Q925J9 1575 aa21.23■□□□□ 0.99
Ptpra-201ENSMUST00000028769 Lnx1O70263 728 aa21.23■□□□□ 0.99
Ptpra-201ENSMUST00000028769 Ube2hP62257 183 aa21.23■□□□□ 0.99
Ptpra-201ENSMUST00000028769 Bach2P97303 839 aa21.23■□□□□ 0.99
Ptpra-201ENSMUST00000028769 Pdzd9Q9D9M4 266 aa21.23■□□□□ 0.99
Ptpra-201ENSMUST00000028769 Mmel1Q9JLI3 765 aa21.23■□□□□ 0.99
Ptpra-201ENSMUST00000028769 Add2Q9QYB8 725 aa21.23■□□□□ 0.99
Ptpra-201ENSMUST00000028769 AceP09470 1312 aa21.22■□□□□ 0.99
Ptpra-201ENSMUST00000028769 Cavin1O54724 392 aa21.22■□□□□ 0.99
Ptpra-201ENSMUST00000028769 Zfp51Q3U4L8 781 aa21.22■□□□□ 0.99
Ptpra-201ENSMUST00000028769 Slit3Q9WVB4 1523 aa21.21■□□□□ 0.99
Ptpra-201ENSMUST00000028769 Me3Q8BMF3 604 aa21.21■□□□□ 0.99
Ptpra-201ENSMUST00000028769 Lmbrd2Q8C561 694 aa21.21■□□□□ 0.99
Ptpra-201ENSMUST00000028769 CebpzP53569 1052 aaKnown RBP21.21■□□□□ 0.99
Ptpra-201ENSMUST00000028769 Bicd2Q921C5 820 aa21.2■□□□□ 0.98
Ptpra-201ENSMUST00000028769 Rrs1Q9CYH6 365 aaKnown RBP21.2■□□□□ 0.98
Ptpra-201ENSMUST00000028769 Mst1rQ62190 1378 aa21.2■□□□□ 0.98
Ptpra-201ENSMUST00000028769 Cct2P80314 535 aaKnown RBP21.2■□□□□ 0.98
Ptpra-201ENSMUST00000028769 Zpr1Q62384 459 aa21.2■□□□□ 0.98
Ptpra-201ENSMUST00000028769 Soga3Q6NZL0 945 aa21.2■□□□□ 0.98
Ptpra-201ENSMUST00000028769 Sgsm2Q80U12 1005 aa21.2■□□□□ 0.98
Ptpra-201ENSMUST00000028769 GphnQ8BUV3 769 aaKnown RBP21.2■□□□□ 0.98
Ptpra-201ENSMUST00000028769 Gimap6Q8K349 305 aa21.2■□□□□ 0.98
Ptpra-201ENSMUST00000028769 Ubash3aQ3V3E1 624 aa21.19■□□□□ 0.98
Ptpra-201ENSMUST00000028769 Abcc4E9Q236 1325 aa21.19■□□□□ 0.98
Ptpra-201ENSMUST00000028769 Timm10P62073 90 aa21.18■□□□□ 0.98
Ptpra-201ENSMUST00000028769 Kcnh5Q920E3 988 aa21.18■□□□□ 0.98
Ptpra-201ENSMUST00000028769 Atg3Q9CPX6 314 aa21.18■□□□□ 0.98
Ptpra-201ENSMUST00000028769 Ahnak2E9PYB0 1738 aaKnown RBP21.18■□□□□ 0.98
Ptpra-201ENSMUST00000028769 Mctp1E9PV86 951 aa21.18■□□□□ 0.98
Ptpra-201ENSMUST00000028769 Esyt1Q3U7R1 1092 aaKnown RBP21.18■□□□□ 0.98
Ptpra-201ENSMUST00000028769 BcanQ61361 883 aa21.18■□□□□ 0.98
Ptpra-201ENSMUST00000028769 Larp1Q6ZQ58 1072 aaKnown RBP21.18■□□□□ 0.98
Ptpra-201ENSMUST00000028769 Dixdc1Q80Y83 711 aa21.18■□□□□ 0.98
Ptpra-201ENSMUST00000028769 OptnQ8K3K8 584 aa21.18■□□□□ 0.98
Ptpra-201ENSMUST00000028769 Pes1Q9EQ61 584 aaKnown RBP21.18■□□□□ 0.98
Ptpra-201ENSMUST00000028769 Cchcr1Q8K2I2 770 aa21.17■□□□□ 0.98
Ptpra-201ENSMUST00000028769 Nfe2l3Q9WTM4 660 aa21.17■□□□□ 0.98
Ptpra-201ENSMUST00000028769 Brpf3B2KF05 1204 aaKnown RBP21.17■□□□□ 0.98
Ptpra-201ENSMUST00000028769 Anp32cQ64G17 123 aa21.17■□□□□ 0.98
Ptpra-201ENSMUST00000028769 Ano8Q6PB70 1060 aa21.17■□□□□ 0.98
Ptpra-201ENSMUST00000028769 NaspQ99MD9 773 aaKnown RBP21.17■□□□□ 0.98
Ptpra-201ENSMUST00000028769 Taf7Q9R1C0 341 aa21.17■□□□□ 0.98
Ptpra-201ENSMUST00000028769 Aox2Q5SGK3 1345 aa21.17■□□□□ 0.98
Ptpra-201ENSMUST00000028769 Rbbp8nlA2ABX0 614 aa21.17■□□□□ 0.98
Ptpra-201ENSMUST00000028769 Ctdnep1Q3TP92 244 aa21.16■□□□□ 0.98
Ptpra-201ENSMUST00000028769 DbnlQ62418 436 aa21.16■□□□□ 0.98
Retrieved 100 of 22,080 RNA–protein pairs in 62.1 ms