RNA–Protein interactions for RNA: ENSMUST00000028280.13

Col5a1-201, Transcript of Collagen alpha-1(V) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col5a1, Length 8,406 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a1-201ENSMUST00000028280 Top1Q04750 767 aaKnown RBP15.94■□□□□ 0.14
Col5a1-201ENSMUST00000028280 Rapgef4Q9EQZ6 1011 aa15.94■□□□□ 0.14
Col5a1-201ENSMUST00000028280 AdnpQ9Z103 1108 aaKnown RBP15.94■□□□□ 0.14
Col5a1-201ENSMUST00000028280 Rsph10bE9PYQ0 876 aa15.94■□□□□ 0.14
Col5a1-201ENSMUST00000028280 Zrsr1Q64707 428 aa15.94■□□□□ 0.14
Col5a1-201ENSMUST00000028280 4931400O07RikQ9D4M5 137 aa15.94■□□□□ 0.14
Col5a1-201ENSMUST00000028280 Mmel1Q9JLI3 765 aa15.94■□□□□ 0.14
Col5a1-201ENSMUST00000028280 Arhgap31A6X8Z5 1425 aa15.94■□□□□ 0.14
Col5a1-201ENSMUST00000028280 Gm28919A0A087WP35 240 aa15.94■□□□□ 0.14
Col5a1-201ENSMUST00000028280 Usp35M0QWN7 1009 aa15.94■□□□□ 0.14
Col5a1-201ENSMUST00000028280 Arl1P61211 181 aa15.94■□□□□ 0.14
Col5a1-201ENSMUST00000028280 Exoc6bA6H5Z3 810 aa15.94■□□□□ 0.14
Col5a1-201ENSMUST00000028280 GmnnO88513 206 aa15.94■□□□□ 0.14
Col5a1-201ENSMUST00000028280 Znf653Q6YND2 615 aa15.94■□□□□ 0.14
Col5a1-201ENSMUST00000028280 NrkQ9R0G8 1455 aa15.94■□□□□ 0.14
Col5a1-201ENSMUST00000028280 Naip1Q9QWK5 1403 aa15.94■□□□□ 0.14
Col5a1-201ENSMUST00000028280 Hmgb2P30681 210 aaKnown RBP15.94■□□□□ 0.14
Col5a1-201ENSMUST00000028280 Fermt1P59113 677 aa15.94■□□□□ 0.14
Col5a1-201ENSMUST00000028280 Gjb2Q00977 226 aa15.94■□□□□ 0.14
Col5a1-201ENSMUST00000028280 Cfap100Q80VN0 613 aa15.94■□□□□ 0.14
Col5a1-201ENSMUST00000028280 Eif2aQ8BJW6 581 aaKnown RBP15.94■□□□□ 0.14
Col5a1-201ENSMUST00000028280 Frat2Q8K025 231 aa15.94■□□□□ 0.14
Col5a1-201ENSMUST00000028280 Bin1O08539 588 aaKnown RBP15.93■□□□□ 0.14
Col5a1-201ENSMUST00000028280 Synpo2Q91YE8 1087 aaKnown RBP15.93■□□□□ 0.14
Col5a1-201ENSMUST00000028280 Ccdc94Q9D6J3 314 aa15.93■□□□□ 0.14
Col5a1-201ENSMUST00000028280 Tnip1Q9WUU8 647 aa15.93■□□□□ 0.14
Col5a1-201ENSMUST00000028280 Six6os1Q9CTN5 574 aa15.93■□□□□ 0.14
Col5a1-201ENSMUST00000028280 Baiap2l1Q9DBJ3 514 aa15.93■□□□□ 0.14
Col5a1-201ENSMUST00000028280 Map3k13Q1HKZ5 959 aa15.93■□□□□ 0.14
Col5a1-201ENSMUST00000028280 Ccdc174Q3U155 467 aa15.93■□□□□ 0.14
Col5a1-201ENSMUST00000028280 Speer4bQ9D9F7 267 aa15.93■□□□□ 0.14
Col5a1-201ENSMUST00000028280 Ube2hP62257 183 aa15.93■□□□□ 0.14
Col5a1-201ENSMUST00000028280 CactinQ9CS00 772 aaKnown RBP15.93■□□□□ 0.14
Col5a1-201ENSMUST00000028280 Cacna2d3Q9Z1L5 1091 aa15.93■□□□□ 0.14
Col5a1-201ENSMUST00000028280 Gm21663A0A0G2JE01 267 aa15.92■□□□□ 0.14
Col5a1-201ENSMUST00000028280 5031410I06RikE9Q4E0 267 aa15.92■□□□□ 0.14
Col5a1-201ENSMUST00000028280 Gm5862K7N5V5 267 aa15.92■□□□□ 0.14
Col5a1-201ENSMUST00000028280 Gm10220K7N660 267 aa15.92■□□□□ 0.14
Col5a1-201ENSMUST00000028280 Tnni2P13412 182 aa15.92■□□□□ 0.14
Col5a1-201ENSMUST00000028280 CebpzP53569 1052 aaKnown RBP15.92■□□□□ 0.14
Col5a1-201ENSMUST00000028280 Eef1dP57776 281 aaKnown RBP15.92■□□□□ 0.14
Col5a1-201ENSMUST00000028280 Maco1Q7TQE6 664 aaKnown RBP15.92■□□□□ 0.14
Col5a1-201ENSMUST00000028280 Clip2Q9Z0H8 1047 aa15.92■□□□□ 0.14
Col5a1-201ENSMUST00000028280 Ift74Q8BKE9 600 aa15.92■□□□□ 0.14
Col5a1-201ENSMUST00000028280 Speer4f2E9Q366 295 aa15.92■□□□□ 0.14
Col5a1-201ENSMUST00000028280 Ranbp1P34022 203 aaKnown RBP15.92■□□□□ 0.14
Col5a1-201ENSMUST00000028280 Tex13c2A0A0G2JGA3 530 aa15.92■□□□□ 0.14
Col5a1-201ENSMUST00000028280 Map4k4P97820 1233 aaKnown RBP15.92■□□□□ 0.14
Col5a1-201ENSMUST00000028280 Kiaa1328Q6NZK5 612 aa15.92■□□□□ 0.14
Col5a1-201ENSMUST00000028280 IqceQ6PCQ0 778 aa15.92■□□□□ 0.14
Col5a1-201ENSMUST00000028280 4930572O03RikQ8C5Y0 211 aa15.92■□□□□ 0.14
Col5a1-201ENSMUST00000028280 Ccdc152E9PX14 254 aa15.91■□□□□ 0.14
Col5a1-201ENSMUST00000028280 Slc38a10Q5I012 1090 aa15.91■□□□□ 0.14
Col5a1-201ENSMUST00000028280 ZgpatQ8VDM1 511 aa15.91■□□□□ 0.14
Col5a1-201ENSMUST00000028280 Pde4bB1AWC9 736 aa15.91■□□□□ 0.14
Col5a1-201ENSMUST00000028280 Api5O35841 504 aaKnown RBP15.91■□□□□ 0.14
Col5a1-201ENSMUST00000028280 Dync1i1O88485 628 aa15.91■□□□□ 0.14
Col5a1-201ENSMUST00000028280 Atp2b1G5E829 1220 aa15.91■□□□□ 0.14
Col5a1-201ENSMUST00000028280 Gm7298A0A0N4SVU1 1476 aa15.91■□□□□ 0.14
Col5a1-201ENSMUST00000028280 Agbl1Q09M05 972 aa15.91■□□□□ 0.14
Col5a1-201ENSMUST00000028280 EprsQ8CGC7 1512 aaKnown RBP15.91■□□□□ 0.14
Col5a1-201ENSMUST00000028280 Fam114a1Q9D281 569 aa15.9■□□□□ 0.14
Col5a1-201ENSMUST00000028280 Ccdc66Q6NS45 935 aa15.9■□□□□ 0.14
Col5a1-201ENSMUST00000028280 Nlrp3Q8R4B8 1033 aa15.9■□□□□ 0.14
Col5a1-201ENSMUST00000028280 SarnpQ9D1J3 210 aaKnown RBP15.9■□□□□ 0.14
Col5a1-201ENSMUST00000028280 Cul5Q9D5V5 780 aa15.9■□□□□ 0.14
Col5a1-201ENSMUST00000028280 Suds3Q8BR65 328 aa15.9■□□□□ 0.14
Col5a1-201ENSMUST00000028280 Aldh1l1Q8R0Y6 902 aa15.9■□□□□ 0.14
Col5a1-201ENSMUST00000028280 Klhl10Q9D5V2 608 aa15.9■□□□□ 0.14
Col5a1-201ENSMUST00000028280 PalmQ9Z0P4 383 aa15.9■□□□□ 0.14
Col5a1-201ENSMUST00000028280 Kif5cP28738 956 aaKnown RBP15.9■□□□□ 0.14
Col5a1-201ENSMUST00000028280 Ankrd49Q8VE42 238 aa15.9■□□□□ 0.14
Col5a1-201ENSMUST00000028280 Cdca7Q9D0M2 382 aa15.9■□□□□ 0.14
Col5a1-201ENSMUST00000028280 Gbp9Q8BTS3 619 aa15.9■□□□□ 0.14
Col5a1-201ENSMUST00000028280 Ssx2ipQ8VC66 615 aa15.9■□□□□ 0.14
Col5a1-201ENSMUST00000028280 Zscan29E9Q5B4 869 aa15.89■□□□□ 0.14
Col5a1-201ENSMUST00000028280 Speer4aF8VPX6 267 aa15.89■□□□□ 0.14
Col5a1-201ENSMUST00000028280 LyarQ08288 388 aaKnown RBP15.89■□□□□ 0.14
Col5a1-201ENSMUST00000028280 Ano10Q8BH79 659 aa15.89■□□□□ 0.14
Col5a1-201ENSMUST00000028280 NapbP28663 298 aa15.89■□□□□ 0.13
Col5a1-201ENSMUST00000028280 Tsga10Q6NY15 697 aa15.89■□□□□ 0.13
Col5a1-201ENSMUST00000028280 Setdb1O88974 1307 aa15.89■□□□□ 0.13
Col5a1-201ENSMUST00000028280 Tbc1d2bQ3U0J8 965 aa15.89■□□□□ 0.13
Col5a1-201ENSMUST00000028280 Map3k9Q3U1V8 1077 aa15.89■□□□□ 0.13
Col5a1-201ENSMUST00000028280 Gtpbp4Q99ME9 634 aaKnown RBP15.89■□□□□ 0.13
Col5a1-201ENSMUST00000028280 Q9D5Q8 446 aa15.89■□□□□ 0.13
Col5a1-201ENSMUST00000028280 Strn4P58404 760 aa15.89■□□□□ 0.13
Col5a1-201ENSMUST00000028280 Zswim4Q8C7B8 1101 aa15.89■□□□□ 0.13
Col5a1-201ENSMUST00000028280 Ccdc122Q8BVN0 290 aa15.88■□□□□ 0.13
Col5a1-201ENSMUST00000028280 Ggnbp2Q5SV77 696 aa15.88■□□□□ 0.13
Col5a1-201ENSMUST00000028280 Rbm27Q5SFM8 1060 aaKnown RBP15.88■□□□□ 0.13
Col5a1-201ENSMUST00000028280 Krt15Q61414 452 aa15.88■□□□□ 0.13
Col5a1-201ENSMUST00000028280 Morc4Q8BMD7 928 aa15.88■□□□□ 0.13
Col5a1-201ENSMUST00000028280 Pik3r4Q8VD65 1358 aa15.88■□□□□ 0.13
Col5a1-201ENSMUST00000028280 Uchl5Q9WUP7 329 aa15.88■□□□□ 0.13
Col5a1-201ENSMUST00000028280 Gm45140A0A0N4SUM8 220 aa15.88■□□□□ 0.13
Col5a1-201ENSMUST00000028280 Limch1Q3UH68 1057 aa15.88■□□□□ 0.13
Col5a1-201ENSMUST00000028280 Rimbp2Q80U40 1072 aa15.88■□□□□ 0.13
Col5a1-201ENSMUST00000028280 Cdca8Q8BHX3 289 aa15.88■□□□□ 0.13
Col5a1-201ENSMUST00000028280 Bag4Q8CI61 457 aa15.88■□□□□ 0.13
Retrieved 100 of 22,080 RNA–protein pairs in 33.9 ms