RNA–Protein interactions for RNA: ENSMUST00000021039.11

Lig3-201, Transcript of DNA ligase 3, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Lig3, Length 5,957 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lig3-201ENSMUST00000021039 Atp2b4Q6Q477 1205 aa9.48□□□□□ -0.89
Lig3-201ENSMUST00000021039 Sf3a1Q8K4Z5 791 aaKnown RBP9.48□□□□□ -0.89
Lig3-201ENSMUST00000021039 Top1mtQ8R4U6 593 aa9.48□□□□□ -0.89
Lig3-201ENSMUST00000021039 Cops6O88545 324 aa9.48□□□□□ -0.89
Lig3-201ENSMUST00000021039 Ddx46Q569Z5 1032 aaKnown RBP9.48□□□□□ -0.89
Lig3-201ENSMUST00000021039 Tmem266Q8BZB3 538 aa9.48□□□□□ -0.89
Lig3-201ENSMUST00000021039 ImmtQ8CAQ8 757 aaKnown RBP9.48□□□□□ -0.89
Lig3-201ENSMUST00000021039 AnlnQ8K298 1121 aaKnown RBP9.48□□□□□ -0.89
Lig3-201ENSMUST00000021039 Ehbp1l1Q99MS7 1716 aa9.48□□□□□ -0.89
Lig3-201ENSMUST00000021039 Slit3Q9WVB4 1523 aa9.48□□□□□ -0.89
Lig3-201ENSMUST00000021039 HmcesQ8R1M0 353 aaKnown RBP9.48□□□□□ -0.89
Lig3-201ENSMUST00000021039 Krt84Q99M73 603 aa9.48□□□□□ -0.89
Lig3-201ENSMUST00000021039 Setd1aE9PYH6 1716 aa9.48□□□□□ -0.89
Lig3-201ENSMUST00000021039 Tmem143Q8VD26 458 aa9.48□□□□□ -0.89
Lig3-201ENSMUST00000021039 Mrpl12Q9DB15 201 aaKnown RBP9.48□□□□□ -0.89
Lig3-201ENSMUST00000021039 Erbb4Q61527 1308 aa9.48□□□□□ -0.89
Lig3-201ENSMUST00000021039 Ppp1r21Q3TDD9 780 aa9.47□□□□□ -0.89
Lig3-201ENSMUST00000021039 Znf692Q3U381 531 aa9.47□□□□□ -0.89
Lig3-201ENSMUST00000021039 AidaQ8C4Q6 305 aa9.47□□□□□ -0.89
Lig3-201ENSMUST00000021039 Znf287Q9EQB9 759 aa9.47□□□□□ -0.89
Lig3-201ENSMUST00000021039 Nolc1E9Q5C9 702 aaKnown RBP9.47□□□□□ -0.89
Lig3-201ENSMUST00000021039 Tpm3P21107 285 aaKnown RBP9.47□□□□□ -0.89
Lig3-201ENSMUST00000021039 Snrpa1P57784 255 aaKnown RBP9.47□□□□□ -0.89
Lig3-201ENSMUST00000021039 CrebrfQ8CDG5 640 aaKnown RBP9.47□□□□□ -0.89
Lig3-201ENSMUST00000021039 Tubb6Q922F4 447 aa9.47□□□□□ -0.89
Lig3-201ENSMUST00000021039 Abca8aQ8K442 1620 aa9.47□□□□□ -0.89
Lig3-201ENSMUST00000021039 Cplx1P63040 134 aa9.47□□□□□ -0.89
Lig3-201ENSMUST00000021039 Smc3Q9CW03 1217 aaKnown RBP9.47□□□□□ -0.89
Lig3-201ENSMUST00000021039 Q4VA45 678 aa9.47□□□□□ -0.89
Lig3-201ENSMUST00000021039 Kiaa0319Q5SZV5 1081 aa9.46□□□□□ -0.89
Lig3-201ENSMUST00000021039 Nap1l3Q794H2 544 aa9.46□□□□□ -0.89
Lig3-201ENSMUST00000021039 Ftsj3Q9DBE9 838 aaKnown RBP9.46□□□□□ -0.89
Lig3-201ENSMUST00000021039 MaddQ80U28 1577 aa9.46□□□□□ -0.89
Lig3-201ENSMUST00000021039 Rrp12Q6P5B0 1295 aaKnown RBP9.46□□□□□ -0.89
Lig3-201ENSMUST00000021039 Bms1Q6PGF5 1284 aaKnown RBP9.46□□□□□ -0.89
Lig3-201ENSMUST00000021039 Larp1Q6ZQ58 1072 aaKnown RBP9.46□□□□□ -0.89
Lig3-201ENSMUST00000021039 1700010I14RikQ7TPG0 532 aa9.46□□□□□ -0.89
Lig3-201ENSMUST00000021039 Atg3Q9CPX6 314 aa9.46□□□□□ -0.89
Lig3-201ENSMUST00000021039 Iqsec2Q5DU25 1478 aa9.46□□□□□ -0.89
Lig3-201ENSMUST00000021039 Lrrcc1Q69ZB0 1026 aa9.46□□□□□ -0.9
Lig3-201ENSMUST00000021039 Q9D9S1 216 aa9.46□□□□□ -0.9
Lig3-201ENSMUST00000021039 Foxp4Q9DBY0 795 aaKnown RBP9.46□□□□□ -0.9
Lig3-201ENSMUST00000021039 Kiaa1107Q80TK0 1369 aa9.46□□□□□ -0.9
Lig3-201ENSMUST00000021039 MycnP03966 462 aaKnown RBP9.46□□□□□ -0.9
Lig3-201ENSMUST00000021039 TbcaP48428 108 aaKnown RBP9.46□□□□□ -0.9
Lig3-201ENSMUST00000021039 Rbm28Q8CGC6 750 aaKnown RBP9.46□□□□□ -0.9
Lig3-201ENSMUST00000021039 Atp2b3Q0VF55 1220 aa9.46□□□□□ -0.9
Lig3-201ENSMUST00000021039 Atp7bQ64446 1462 aa9.45□□□□□ -0.9
Lig3-201ENSMUST00000021039 TrhQ62361 256 aa9.45□□□□□ -0.9
Lig3-201ENSMUST00000021039 OscarQ8VBT3 265 aa9.45□□□□□ -0.9
Lig3-201ENSMUST00000021039 NsmfQ99NF2 532 aa9.45□□□□□ -0.9
Lig3-201ENSMUST00000021039 Ltv1Q6NSQ7 470 aaKnown RBP9.45□□□□□ -0.9
Lig3-201ENSMUST00000021039 Tmem119Q8R138 280 aa9.45□□□□□ -0.9
Lig3-201ENSMUST00000021039 RarsQ9D0I9 660 aaKnown RBP9.45□□□□□ -0.9
Lig3-201ENSMUST00000021039 Rps6ka4Q9Z2B9 773 aa9.45□□□□□ -0.9
Lig3-201ENSMUST00000021039 Nrxn3Q6P9K9 1571 aa9.45□□□□□ -0.9
Lig3-201ENSMUST00000021039 CltaO08585 235 aa9.45□□□□□ -0.9
Lig3-201ENSMUST00000021039 Fam160b2Q80YR2 744 aa9.45□□□□□ -0.9
Lig3-201ENSMUST00000021039 Ssfa2Q922B9 1252 aa9.45□□□□□ -0.9
Lig3-201ENSMUST00000021039 Igsf1Q7TQA1 1317 aa9.45□□□□□ -0.9
Lig3-201ENSMUST00000021039 GalcP54818 684 aa9.45□□□□□ -0.9
Lig3-201ENSMUST00000021039 Krt25Q8VCW2 446 aa9.45□□□□□ -0.9
Lig3-201ENSMUST00000021039 IncenpQ9WU62 880 aa9.45□□□□□ -0.9
Lig3-201ENSMUST00000021039 Trpm1Q2TV84 1622 aa9.45□□□□□ -0.9
Lig3-201ENSMUST00000021039 Mical1Q8VDP3 1048 aa9.44□□□□□ -0.9
Lig3-201ENSMUST00000021039 Iqsec3Q3TES0 1195 aa9.44□□□□□ -0.9
Lig3-201ENSMUST00000021039 Fam13aQ8BGI4 693 aa9.44□□□□□ -0.9
Lig3-201ENSMUST00000021039 Jakmip1Q8BVL9 626 aa9.44□□□□□ -0.9
Lig3-201ENSMUST00000021039 Dbndd1Q9CZ00 160 aa9.44□□□□□ -0.9
Lig3-201ENSMUST00000021039 Prl3d2F6R3P9 224 aa9.44□□□□□ -0.9
Lig3-201ENSMUST00000021039 Mylk2Q8VCR8 613 aa9.44□□□□□ -0.9
Lig3-201ENSMUST00000021039 Kri1Q8VDQ9 704 aaKnown RBP9.44□□□□□ -0.9
Lig3-201ENSMUST00000021039 BccipQ9CWI3 316 aa9.44□□□□□ -0.9
Lig3-201ENSMUST00000021039 Abcc10Q8R4P9 1501 aa9.44□□□□□ -0.9
Lig3-201ENSMUST00000021039 Fam135bQ9DAI6 1403 aa9.44□□□□□ -0.9
Lig3-201ENSMUST00000021039 Stox1B2RQL2 990 aa9.44□□□□□ -0.9
Lig3-201ENSMUST00000021039 Terf1P70371 421 aa9.44□□□□□ -0.9
Lig3-201ENSMUST00000021039 Naa16Q9DBB4 864 aa9.44□□□□□ -0.9
Lig3-201ENSMUST00000021039 Zc3h13E9Q784 1729 aaKnown RBP9.43□□□□□ -0.9
Lig3-201ENSMUST00000021039 Itga6Q61739 1091 aa9.43□□□□□ -0.9
Lig3-201ENSMUST00000021039 Ppp4r3bQ922R5 820 aa9.43□□□□□ -0.9
Lig3-201ENSMUST00000021039 Cfap99A0A140LIX9 648 aa9.43□□□□□ -0.9
Lig3-201ENSMUST00000021039 Ces1aE9PYP1 563 aa9.43□□□□□ -0.9
Lig3-201ENSMUST00000021039 Rfx1P48377 963 aa9.43□□□□□ -0.9
Lig3-201ENSMUST00000021039 Ccdc129Q14B48 1034 aa9.43□□□□□ -0.9
Lig3-201ENSMUST00000021039 Gas2l2Q5SSG4 860 aa9.43□□□□□ -0.9
Lig3-201ENSMUST00000021039 Spty2d1Q68FG3 682 aa9.43□□□□□ -0.9
Lig3-201ENSMUST00000021039 Rai14Q9EP71 979 aaKnown RBP9.43□□□□□ -0.9
Lig3-201ENSMUST00000021039 Odf2A3KGV1 830 aaKnown RBP9.43□□□□□ -0.9
Lig3-201ENSMUST00000021039 Cap2Q9CYT6 476 aa9.43□□□□□ -0.9
Lig3-201ENSMUST00000021039 Bcar3Q9QZK2 820 aa9.43□□□□□ -0.9
Lig3-201ENSMUST00000021039 Stk36Q69ZM6 1316 aa9.43□□□□□ -0.9
Lig3-201ENSMUST00000021039 Kcnh4A2A5F7 1018 aa9.43□□□□□ -0.9
Lig3-201ENSMUST00000021039 Mcmdc2E9Q956 681 aa9.43□□□□□ -0.9
Lig3-201ENSMUST00000021039 IntuQ059U7 942 aa9.43□□□□□ -0.9
Lig3-201ENSMUST00000021039 Ppp1r37Q8BKR5 712 aa9.43□□□□□ -0.9
Lig3-201ENSMUST00000021039 Smc5Q8CG46 1101 aaKnown RBP9.43□□□□□ -0.9
Lig3-201ENSMUST00000021039 Krt82Q99M74 516 aa9.43□□□□□ -0.9
Lig3-201ENSMUST00000021039 Hdac9Q99N13 588 aa9.43□□□□□ -0.9
Lig3-201ENSMUST00000021039 MeiocA2AG06 965 aa9.43□□□□□ -0.9
Retrieved 100 of 22,080 RNA–protein pairs in 32.6 ms