RNA–Protein interactions for RNA: ENST00000507488.6

ATP2C1-212, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene ATP2C1, Length 3,579 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-212ENST00000507488 EDDM13A0A1B0GTR0 161 aa4.36□□□□□ -1.71
ATP2C1-212ENST00000507488 OR2A25A4D2G3 310 aa4.36□□□□□ -1.71
ATP2C1-212ENST00000507488 MGAT4DA6NG13 374 aa4.36□□□□□ -1.71
ATP2C1-212ENST00000507488 QSOX1O00391 747 aa4.36□□□□□ -1.71
ATP2C1-212ENST00000507488 ZSCAN9O15535 394 aaPredicted RBP4.36□□□□□ -1.71
ATP2C1-212ENST00000507488 P2RX6O15547 441 aa4.36□□□□□ -1.71
ATP2C1-212ENST00000507488 OR1F1O43749 312 aa4.36□□□□□ -1.71
ATP2C1-212ENST00000507488 PCDHGA12O60330 932 aa4.36□□□□□ -1.71
ATP2C1-212ENST00000507488 WBP4O75554 376 aaKnown RBP4.36□□□□□ -1.71
ATP2C1-212ENST00000507488 MED26O95402 600 aa4.36□□□□□ -1.71
ATP2C1-212ENST00000507488 CATP04040 527 aaKnown RBP4.36□□□□□ -1.71
ATP2C1-212ENST00000507488 HNRNPA1P09651 372 aaKnown RBP eCLIP4.36□□□□□ -1.71
ATP2C1-212ENST00000507488 CDH3P22223 829 aa4.36□□□□□ -1.71
ATP2C1-212ENST00000507488 PCGF2P35227 344 aa4.36□□□□□ -1.71
ATP2C1-212ENST00000507488 SOX18P35713 384 aa4.36□□□□□ -1.71
ATP2C1-212ENST00000507488 RXRGP48443 463 aa4.36□□□□□ -1.71
ATP2C1-212ENST00000507488 PRKAG1P54619 331 aa4.36□□□□□ -1.71
ATP2C1-212ENST00000507488 DCDC1P59894 354 aa4.36□□□□□ -1.71
ATP2C1-212ENST00000507488 NCS1P62166 190 aa4.36□□□□□ -1.71
ATP2C1-212ENST00000507488 CSTF1Q05048 431 aaKnown RBP4.36□□□□□ -1.71
ATP2C1-212ENST00000507488 C2orf80Q0P641 193 aa4.36□□□□□ -1.71
ATP2C1-212ENST00000507488 OXA1LQ15070 435 aa4.36□□□□□ -1.71
ATP2C1-212ENST00000507488 PDGFRLQ15198 375 aa4.36□□□□□ -1.71
ATP2C1-212ENST00000507488 SPIN4Q56A73 249 aa4.36□□□□□ -1.71
ATP2C1-212ENST00000507488 PAGE2BQ5JRK9 111 aa4.36□□□□□ -1.71
ATP2C1-212ENST00000507488 KIAA1324Q6UXG2 1013 aaKnown RBP4.36□□□□□ -1.71
ATP2C1-212ENST00000507488 AHSA2Q719I0 299 aa4.36□□□□□ -1.71
ATP2C1-212ENST00000507488 CAMKMTQ7Z624 323 aa4.36□□□□□ -1.71
ATP2C1-212ENST00000507488 P3H2Q8IVL5 708 aa4.36□□□□□ -1.71
ATP2C1-212ENST00000507488 KLHDC8AQ8IYD2 350 aa4.36□□□□□ -1.71
ATP2C1-212ENST00000507488 ENTHD1Q8IYW4 607 aa4.36□□□□□ -1.71
ATP2C1-212ENST00000507488 ZBTB8BQ8NAP8 495 aaPredicted RBP4.36□□□□□ -1.71
ATP2C1-212ENST00000507488 TMEM52Q8NDY8 209 aa4.36□□□□□ -1.71
ATP2C1-212ENST00000507488 DYNC2LI1Q8TCX1 351 aa4.36□□□□□ -1.71
ATP2C1-212ENST00000507488 CHTF18Q8WVB6 975 aa4.36□□□□□ -1.71
ATP2C1-212ENST00000507488 APH1BQ8WW43 257 aa4.36□□□□□ -1.71
ATP2C1-212ENST00000507488 COQ8BQ96D53 544 aa4.36□□□□□ -1.71
ATP2C1-212ENST00000507488 FERD3LQ96RJ6 166 aa4.36□□□□□ -1.71
ATP2C1-212ENST00000507488 NIPSNAP1Q9BPW8 284 aa4.36□□□□□ -1.71
ATP2C1-212ENST00000507488 GABARAPL3Q9BY60 117 aa4.36□□□□□ -1.71
ATP2C1-212ENST00000507488 SFXN1Q9H9B4 322 aa4.36□□□□□ -1.71
ATP2C1-212ENST00000507488 EQTNQ9NQ60 294 aa4.36□□□□□ -1.71
ATP2C1-212ENST00000507488 TRNAU1APQ9NX07 287 aaKnown RBP4.36□□□□□ -1.71
ATP2C1-212ENST00000507488 ZNF624Q9P2J8 865 aaPredicted RBP4.36□□□□□ -1.71
ATP2C1-212ENST00000507488 ZNF282Q9UDV7 671 aaPredicted RBP4.36□□□□□ -1.71
ATP2C1-212ENST00000507488 MAPRE3Q9UPY8 281 aa4.36□□□□□ -1.71
ATP2C1-212ENST00000507488 ICKQ9UPZ9 632 aa4.36□□□□□ -1.71
ATP2C1-212ENST00000507488 PCDHGB3Q9Y5G1 929 aa4.36□□□□□ -1.71
ATP2C1-212ENST00000507488 PCDHGA6Q9Y5G7 932 aa4.36□□□□□ -1.71
ATP2C1-212ENST00000507488 AP1M2Q9Y6Q5 423 aa4.36□□□□□ -1.71
ATP2C1-212ENST00000507488 AKAP13Q12802 2813 aa4.36□□□□□ -1.71
ATP2C1-212ENST00000507488 FANCMQ8IYD8 2048 aa4.36□□□□□ -1.71
ATP2C1-212ENST00000507488 TMEM247A6NEH6 219 aa4.36□□□□□ -1.71
ATP2C1-212ENST00000507488 PDZK1P1A8MUH7 402 aa4.36□□□□□ -1.71
ATP2C1-212ENST00000507488 E9PQ18 207 aa4.36□□□□□ -1.71
ATP2C1-212ENST00000507488 TNFRSF11BO00300 401 aa4.36□□□□□ -1.71
ATP2C1-212ENST00000507488 RNASET2O00584 256 aaKnown RBP4.36□□□□□ -1.71
ATP2C1-212ENST00000507488 PCDH17O14917 1159 aa4.36□□□□□ -1.71
ATP2C1-212ENST00000507488 SDC3O75056 442 aa4.36□□□□□ -1.71
ATP2C1-212ENST00000507488 EFCAB14O75071 495 aa4.36□□□□□ -1.71
ATP2C1-212ENST00000507488 CDC123O75794 336 aaPredicted RBP4.36□□□□□ -1.71
ATP2C1-212ENST00000507488 WISP1O95388 367 aa4.36□□□□□ -1.71
ATP2C1-212ENST00000507488 ZIC2O95409 532 aaPredicted RBP4.36□□□□□ -1.71
ATP2C1-212ENST00000507488 CHRM5P08912 532 aaPredicted RBP4.36□□□□□ -1.71
ATP2C1-212ENST00000507488 CD36P16671 472 aa4.36□□□□□ -1.71
ATP2C1-212ENST00000507488 FUT1P19526 365 aa4.36□□□□□ -1.71
ATP2C1-212ENST00000507488 CERS1P27544 350 aa4.36□□□□□ -1.71
ATP2C1-212ENST00000507488 CTHP32929 405 aa4.36□□□□□ -1.71
ATP2C1-212ENST00000507488 SOAT1P35610 550 aa4.36□□□□□ -1.71
ATP2C1-212ENST00000507488 SELENOWP63302 87 aa4.36□□□□□ -1.71
ATP2C1-212ENST00000507488 PCDH1Q08174 1060 aa4.36□□□□□ -1.71
ATP2C1-212ENST00000507488 LRRC74AQ0VAA2 488 aa4.36□□□□□ -1.71
ATP2C1-212ENST00000507488 TP53BP2Q13625 1128 aa4.36□□□□□ -1.71
ATP2C1-212ENST00000507488 ERV3-1Q14264 604 aa4.36□□□□□ -1.71
ATP2C1-212ENST00000507488 TEAD4Q15561 434 aa4.36□□□□□ -1.71
ATP2C1-212ENST00000507488 INAQ16352 499 aa4.36□□□□□ -1.71
ATP2C1-212ENST00000507488 HIST2H2ACQ16777 129 aaPredicted RBP4.36□□□□□ -1.71
ATP2C1-212ENST00000507488 PERM1Q5SV97 790 aa4.36□□□□□ -1.71
ATP2C1-212ENST00000507488 FAM69BQ5VUD6 431 aa4.36□□□□□ -1.71
ATP2C1-212ENST00000507488 FRMPD2BQ6IN97 320 aa4.36□□□□□ -1.71
ATP2C1-212ENST00000507488 ENPP7Q6UWV6 458 aa4.36□□□□□ -1.71
ATP2C1-212ENST00000507488 AMZ2Q86W34 360 aa4.36□□□□□ -1.71
ATP2C1-212ENST00000507488 HORMAD2Q8N7B1 307 aa4.36□□□□□ -1.71
ATP2C1-212ENST00000507488 C11orf65Q8NCR3 313 aa4.36□□□□□ -1.71
ATP2C1-212ENST00000507488 OR6Q1Q8NGQ2 317 aa4.36□□□□□ -1.71
ATP2C1-212ENST00000507488 OR9A1PQ8NGU1 263 aa4.36□□□□□ -1.71
ATP2C1-212ENST00000507488 OR2L2Q8NH16 312 aa4.36□□□□□ -1.71
ATP2C1-212ENST00000507488 PUM2Q8TB72 1066 aaKnown RBP eCLIP4.36□□□□□ -1.71
ATP2C1-212ENST00000507488 SPPL2AQ8TCT8 520 aa4.36□□□□□ -1.71
ATP2C1-212ENST00000507488 C16orf78Q8WTQ4 265 aa4.36□□□□□ -1.71
ATP2C1-212ENST00000507488 DNASE1L2Q92874 299 aa4.36□□□□□ -1.71
ATP2C1-212ENST00000507488 TAMM41Q96BW9 452 aa4.36□□□□□ -1.71
ATP2C1-212ENST00000507488 LGALS12Q96DT0 336 aa4.36□□□□□ -1.71
ATP2C1-212ENST00000507488 HRASLS5Q96KN8 279 aa4.36□□□□□ -1.71
ATP2C1-212ENST00000507488 MRGPRX1Q96LB2 322 aa4.36□□□□□ -1.71
ATP2C1-212ENST00000507488 KCNC2Q96PR1 638 aa4.36□□□□□ -1.71
ATP2C1-212ENST00000507488 KLHDC3Q9BQ90 382 aa4.36□□□□□ -1.71
ATP2C1-212ENST00000507488 ITPAQ9BY32 194 aa4.36□□□□□ -1.71
ATP2C1-212ENST00000507488 MROQ9BYG7 248 aa4.36□□□□□ -1.71
ATP2C1-212ENST00000507488 CAPN10Q9HC96 672 aa4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms