RNA–Protein interactions for RNA: ENST00000546378.1

HOXC11-202, Transcript of homeobox C11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC11, Length 3,261 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC11-202ENST00000546378 GALNT9Q9HCQ5 603 aa14□□□□□ -0.17
HOXC11-202ENST00000546378 TBC1D24Q9ULP9 559 aa14□□□□□ -0.17
HOXC11-202ENST00000546378 CELP19835 753 aa14□□□□□ -0.17
HOXC11-202ENST00000546378 RPS3P23396 243 aaKnown RBP eCLIP14□□□□□ -0.17
HOXC11-202ENST00000546378 GABRR2P28476 465 aa14□□□□□ -0.17
HOXC11-202ENST00000546378 SERPINA4P29622 427 aa14□□□□□ -0.17
HOXC11-202ENST00000546378 SOX18P35713 384 aa14□□□□□ -0.17
HOXC11-202ENST00000546378 RECQLP46063 649 aaPredicted RBP14□□□□□ -0.17
HOXC11-202ENST00000546378 RAB15P59190 212 aa14□□□□□ -0.17
HOXC11-202ENST00000546378 ARPC4P59998 168 aa14□□□□□ -0.17
HOXC11-202ENST00000546378 P2RY14Q15391 338 aa14□□□□□ -0.17
HOXC11-202ENST00000546378 SPHARQ15513 63 aa14□□□□□ -0.17
HOXC11-202ENST00000546378 GCNT6Q5T4J0 391 aa14□□□□□ -0.17
HOXC11-202ENST00000546378 SPRED2Q7Z698 418 aa14□□□□□ -0.17
HOXC11-202ENST00000546378 OR6F1Q8NGZ6 308 aa14□□□□□ -0.17
HOXC11-202ENST00000546378 CHAC2Q8WUX2 184 aa14□□□□□ -0.17
HOXC11-202ENST00000546378 DHRS1Q96LJ7 313 aa14□□□□□ -0.17
HOXC11-202ENST00000546378 CCDC115Q96NT0 180 aa14□□□□□ -0.17
HOXC11-202ENST00000546378 TSSK6Q9BXA6 273 aa14□□□□□ -0.17
HOXC11-202ENST00000546378 BARHL1Q9BZE3 327 aa14□□□□□ -0.17
HOXC11-202ENST00000546378 GREB1Q4ZG55 1949 aa14□□□□□ -0.17
HOXC11-202ENST00000546378 PDCD11Q14690 1871 aaKnown RBP14□□□□□ -0.17
HOXC11-202ENST00000546378 ABHD14A-ACY1A0A1B0GW23 586 aa14□□□□□ -0.17
HOXC11-202ENST00000546378 DVL2O14641 736 aa14□□□□□ -0.17
HOXC11-202ENST00000546378 PPM1DO15297 605 aa14□□□□□ -0.17
HOXC11-202ENST00000546378 SLC28A2O43868 658 aa14□□□□□ -0.17
HOXC11-202ENST00000546378 VNN2O95498 520 aa14□□□□□ -0.17
HOXC11-202ENST00000546378 ITGAMP11215 1152 aa14□□□□□ -0.17
HOXC11-202ENST00000546378 LHCGRP22888 699 aa14□□□□□ -0.17
HOXC11-202ENST00000546378 CD79BP40259 229 aa14□□□□□ -0.17
HOXC11-202ENST00000546378 GSTM5P46439 218 aa14□□□□□ -0.17
HOXC11-202ENST00000546378 MANFP55145 182 aaKnown RBP14□□□□□ -0.17
HOXC11-202ENST00000546378 RPS7P62081 194 aaKnown RBP14□□□□□ -0.17
HOXC11-202ENST00000546378 KCNC4Q03721 635 aa14□□□□□ -0.17
HOXC11-202ENST00000546378 USP45Q70EL2 814 aa14□□□□□ -0.17
HOXC11-202ENST00000546378 RRM2BQ7LG56 351 aa14□□□□□ -0.17
HOXC11-202ENST00000546378 TXNDC15Q96J42 360 aa14□□□□□ -0.17
HOXC11-202ENST00000546378 ZFP3Q96NJ6 502 aa14□□□□□ -0.17
HOXC11-202ENST00000546378 MCUBQ9NWR8 336 aa14□□□□□ -0.17
HOXC11-202ENST00000546378 LHX3Q9UBR4 397 aa14□□□□□ -0.17
HOXC11-202ENST00000546378 SH2B3Q9UQQ2 575 aa14□□□□□ -0.17
HOXC11-202ENST00000546378 SPAG17Q6Q759 2223 aa13.99□□□□□ -0.17
HOXC11-202ENST00000546378 IGLV3-10A0A075B6K4 115 aa13.99□□□□□ -0.17
HOXC11-202ENST00000546378 A0A1W2PRU2 124 aa13.99□□□□□ -0.17
HOXC11-202ENST00000546378 INPPL1O15357 1258 aa13.99□□□□□ -0.17
HOXC11-202ENST00000546378 PRPS2P11908 318 aa13.99□□□□□ -0.17
HOXC11-202ENST00000546378 NSG1P42857 185 aa13.99□□□□□ -0.17
HOXC11-202ENST00000546378 SSX1Q16384 188 aa13.99□□□□□ -0.17
HOXC11-202ENST00000546378 MPPE1Q53F39 396 aa13.99□□□□□ -0.17
HOXC11-202ENST00000546378 FCRLBQ6BAA4 426 aa13.99□□□□□ -0.17
HOXC11-202ENST00000546378 CBLL1Q75N03 491 aa13.99□□□□□ -0.17
HOXC11-202ENST00000546378 ELMOD1Q8N336 334 aa13.99□□□□□ -0.17
HOXC11-202ENST00000546378 JPH3Q8WXH2 748 aaPredicted RBP13.99□□□□□ -0.17
HOXC11-202ENST00000546378 C1QTNF6Q9BXI9 259 aa13.99□□□□□ -0.17
HOXC11-202ENST00000546378 OSGEPL1Q9H4B0 414 aa13.99□□□□□ -0.17
HOXC11-202ENST00000546378 MRPL17Q9NRX2 175 aaKnown RBP13.99□□□□□ -0.17
HOXC11-202ENST00000546378 CNIH4Q9P003 139 aa13.99□□□□□ -0.17
HOXC11-202ENST00000546378 PCDHB11Q9Y5F2 797 aa13.99□□□□□ -0.17
HOXC11-202ENST00000546378 FADS2P1A8MWK0 482 aa13.99□□□□□ -0.17
HOXC11-202ENST00000546378 WASH4PA8MWX3 477 aa13.99□□□□□ -0.17
HOXC11-202ENST00000546378 ZNF197O14709 1029 aa13.99□□□□□ -0.17
HOXC11-202ENST00000546378 HPGDSO60760 199 aa13.99□□□□□ -0.17
HOXC11-202ENST00000546378 FGBP02675 491 aa13.99□□□□□ -0.17
HOXC11-202ENST00000546378 IFNW1P05000 195 aa13.99□□□□□ -0.17
HOXC11-202ENST00000546378 PRKCAP17252 672 aa13.99□□□□□ -0.17
HOXC11-202ENST00000546378 IFNA8P32881 189 aa13.99□□□□□ -0.17
HOXC11-202ENST00000546378 CSTF2P33240 577 aaKnown RBP eCLIP13.99□□□□□ -0.17
HOXC11-202ENST00000546378 HNRNPFP52597 415 aaKnown RBP13.99□□□□□ -0.17
HOXC11-202ENST00000546378 CTBP2P56545 445 aa13.99□□□□□ -0.17
HOXC11-202ENST00000546378 B4GALNT1Q00973 533 aa13.99□□□□□ -0.17
HOXC11-202ENST00000546378 MRPL58Q14197 206 aaKnown RBP13.99□□□□□ -0.17
HOXC11-202ENST00000546378 ZNF267Q14586 743 aaPredicted RBP13.99□□□□□ -0.17
HOXC11-202ENST00000546378 CBX2Q14781 532 aaPredicted RBP13.99□□□□□ -0.17
HOXC11-202ENST00000546378 KLHL12Q53G59 568 aa13.99□□□□□ -0.17
HOXC11-202ENST00000546378 DNAJC5GQ8N7S2 189 aa13.99□□□□□ -0.17
HOXC11-202ENST00000546378 ZNF614Q8N883 585 aa13.99□□□□□ -0.17
HOXC11-202ENST00000546378 ZFPM2Q8WW38 1151 aa13.99□□□□□ -0.17
HOXC11-202ENST00000546378 IPCEF1Q8WWN9 437 aaPredicted RBP13.99□□□□□ -0.17
HOXC11-202ENST00000546378 VWCEQ96DN2 955 aa13.99□□□□□ -0.17
HOXC11-202ENST00000546378 LRR1Q96L50 414 aa13.99□□□□□ -0.17
HOXC11-202ENST00000546378 TMEM175Q9BSA9 504 aa13.99□□□□□ -0.17
HOXC11-202ENST00000546378 C2orf49Q9BVC5 232 aaPredicted RBP13.99□□□□□ -0.17
HOXC11-202ENST00000546378 TSPAN4O14817 238 aa13.98□□□□□ -0.17
HOXC11-202ENST00000546378 CXCL14O95715 111 aa13.98□□□□□ -0.17
HOXC11-202ENST00000546378 IL3P08700 152 aa13.98□□□□□ -0.17
HOXC11-202ENST00000546378 CR2P20023 1033 aa13.98□□□□□ -0.17
HOXC11-202ENST00000546378 PPM1FP49593 454 aaPredicted RBP13.98□□□□□ -0.17
HOXC11-202ENST00000546378 CRYBA2P53672 197 aa13.98□□□□□ -0.17
HOXC11-202ENST00000546378 RPL6Q02878 288 aaKnown RBP13.98□□□□□ -0.17
HOXC11-202ENST00000546378 KEAP1Q14145 624 aa13.98□□□□□ -0.17
HOXC11-202ENST00000546378 PLPP4Q5VZY2 271 aa13.98□□□□□ -0.17
HOXC11-202ENST00000546378 PDZD3Q86UT5 571 aa13.98□□□□□ -0.17
HOXC11-202ENST00000546378 ZNF461Q8TAF7 563 aa13.98□□□□□ -0.17
HOXC11-202ENST00000546378 PSD2Q9BQI7 771 aa13.98□□□□□ -0.17
HOXC11-202ENST00000546378 WSB2Q9NYS7 404 aaPredicted RBP13.98□□□□□ -0.17
HOXC11-202ENST00000546378 SEC14L3Q9UDX4 400 aa13.98□□□□□ -0.17
HOXC11-202ENST00000546378 SPATA2Q9UM82 520 aa13.98□□□□□ -0.17
HOXC11-202ENST00000546378 CFL2Q9Y281 166 aa13.98□□□□□ -0.17
HOXC11-202ENST00000546378 RTTNQ86VV8 2226 aa13.98□□□□□ -0.17
HOXC11-202ENST00000546378 PRAMEF25A6NGN4 478 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms