RNA–Protein interactions for RNA: ENST00000480828.5

UBE2F-221, Transcript of ubiquitin conjugating enzyme E2 F (putative), humanhuman

TSL 2

Gene UBE2F, Length 802 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2F-221ENST00000480828 A0A087WZ39 114 aa3.22□□□□□ -1.89
UBE2F-221ENST00000480828 TNFSF12-TNFSF13A0A0A6YY99 330 aa3.22□□□□□ -1.89
UBE2F-221ENST00000480828 EME2A4GXA9 379 aaPredicted RBP3.22□□□□□ -1.89
UBE2F-221ENST00000480828 YJEFN3A6XGL0 299 aa3.22□□□□□ -1.89
UBE2F-221ENST00000480828 PRAC2D3DTV9 90 aa3.22□□□□□ -1.89
UBE2F-221ENST00000480828 ANHXE9PGG2 379 aa3.22□□□□□ -1.89
UBE2F-221ENST00000480828 K7EQM0 130 aa3.22□□□□□ -1.89
UBE2F-221ENST00000480828 CXCL11O14625 94 aa3.22□□□□□ -1.89
UBE2F-221ENST00000480828 CHEK1O14757 476 aa3.22□□□□□ -1.89
UBE2F-221ENST00000480828 KCNAB3O43448 404 aa3.22□□□□□ -1.89
UBE2F-221ENST00000480828 PRKNO60260 465 aaPredicted RBP3.22□□□□□ -1.89
UBE2F-221ENST00000480828 GPRIN2O60269 458 aa3.22□□□□□ -1.89
UBE2F-221ENST00000480828 GLRA3O75311 464 aa3.22□□□□□ -1.89
UBE2F-221ENST00000480828 ZNF821O75541 412 aaPredicted RBP3.22□□□□□ -1.89
UBE2F-221ENST00000480828 GPIP06744 558 aa3.22□□□□□ -1.89
UBE2F-221ENST00000480828 HIST1H2AGP0C0S8 130 aaPredicted RBP3.22□□□□□ -1.89
UBE2F-221ENST00000480828 IGHV4-38-2P0DP08 117 aa3.22□□□□□ -1.89
UBE2F-221ENST00000480828 DAOP14920 347 aa3.22□□□□□ -1.89
UBE2F-221ENST00000480828 RPA2P15927 270 aa3.22□□□□□ -1.89
UBE2F-221ENST00000480828 TNNI3P19429 210 aa3.22□□□□□ -1.89
UBE2F-221ENST00000480828 ITGA3P26006 1051 aa3.22□□□□□ -1.89
UBE2F-221ENST00000480828 CEACAM8P31997 349 aaPredicted RBP3.22□□□□□ -1.89
UBE2F-221ENST00000480828 PTGFRP43088 359 aa3.22□□□□□ -1.89
UBE2F-221ENST00000480828 ACADSBP45954 432 aa3.22□□□□□ -1.89
UBE2F-221ENST00000480828 NPY2RP49146 381 aa3.22□□□□□ -1.89
UBE2F-221ENST00000480828 HOXA1P49639 335 aaPredicted RBP3.22□□□□□ -1.89
UBE2F-221ENST00000480828 NUMBP49757 651 aa3.22□□□□□ -1.89
UBE2F-221ENST00000480828 DCDC1P59894 354 aa3.22□□□□□ -1.89
UBE2F-221ENST00000480828 NUCB2P80303 420 aa3.22□□□□□ -1.89
UBE2F-221ENST00000480828 CNTN2Q02246 1040 aa3.22□□□□□ -1.89
UBE2F-221ENST00000480828 NME3Q13232 169 aa3.22□□□□□ -1.89
UBE2F-221ENST00000480828 TMEM132DQ14C87 1099 aa3.22□□□□□ -1.89
UBE2F-221ENST00000480828 P2RY6Q15077 328 aa3.22□□□□□ -1.89
UBE2F-221ENST00000480828 OR1C1Q15619 314 aa3.22□□□□□ -1.89
UBE2F-221ENST00000480828 TRIP10Q15642 601 aa3.22□□□□□ -1.89
UBE2F-221ENST00000480828 TWIST1Q15672 202 aa3.22□□□□□ -1.89
UBE2F-221ENST00000480828 PDK4Q16654 411 aa3.22□□□□□ -1.89
UBE2F-221ENST00000480828 ANKRD55Q3KP44 614 aa3.22□□□□□ -1.89
UBE2F-221ENST00000480828 TECRLQ5HYJ1 363 aa3.22□□□□□ -1.89
UBE2F-221ENST00000480828 FGD3Q5JSP0 725 aa3.22□□□□□ -1.89
UBE2F-221ENST00000480828 ARHGEF16Q5VV41 709 aa3.22□□□□□ -1.89
UBE2F-221ENST00000480828 PLPP4Q5VZY2 271 aa3.22□□□□□ -1.89
UBE2F-221ENST00000480828 ASPHD2Q6ICH7 369 aa3.22□□□□□ -1.89
UBE2F-221ENST00000480828 CAPRIN2Q6IMN6 1127 aaKnown RBP3.22□□□□□ -1.89
UBE2F-221ENST00000480828 TCEAL6Q6IPX3 200 aa3.22□□□□□ -1.89
UBE2F-221ENST00000480828 LIN28BQ6ZN17 250 aaKnown RBP eCLIP3.22□□□□□ -1.89
UBE2F-221ENST00000480828 FCRLAQ7L513 359 aa3.22□□□□□ -1.89
UBE2F-221ENST00000480828 ARHGAP30Q7Z6I6 1101 aaPredicted RBP3.22□□□□□ -1.89
UBE2F-221ENST00000480828 CACUL1Q86Y37 369 aa3.22□□□□□ -1.89
UBE2F-221ENST00000480828 HIST2H2ABQ8IUE6 130 aaPredicted RBP3.22□□□□□ -1.89
UBE2F-221ENST00000480828 ZDHHC17Q8IUH5 632 aa3.22□□□□□ -1.89
UBE2F-221ENST00000480828 GCNT2Q8N0V5 402 aa3.22□□□□□ -1.89
UBE2F-221ENST00000480828 ZCCHC7Q8N3Z6 543 aaKnown RBP3.22□□□□□ -1.89
UBE2F-221ENST00000480828 OR13A1Q8NGR1 328 aa3.22□□□□□ -1.89
UBE2F-221ENST00000480828 OR1L3Q8NH93 324 aa3.22□□□□□ -1.89
UBE2F-221ENST00000480828 U2AF1L4Q8WU68 220 aaKnown RBP3.22□□□□□ -1.89
UBE2F-221ENST00000480828 APOBEC4Q8WW27 367 aaKnown RBP3.22□□□□□ -1.89
UBE2F-221ENST00000480828 HIST1H2ACQ93077 130 aa3.22□□□□□ -1.89
UBE2F-221ENST00000480828 RTP4Q96DX8 246 aa3.22□□□□□ -1.89
UBE2F-221ENST00000480828 HMCESQ96FZ2 354 aa3.22□□□□□ -1.89
UBE2F-221ENST00000480828 COG3Q96JB2 828 aa3.22□□□□□ -1.89
UBE2F-221ENST00000480828 LRR1Q96L50 414 aa3.22□□□□□ -1.89
UBE2F-221ENST00000480828 ZNF354BQ96LW1 612 aa3.22□□□□□ -1.89
UBE2F-221ENST00000480828 ZNF607Q96SK3 696 aa3.22□□□□□ -1.89
UBE2F-221ENST00000480828 LPAR4Q99677 370 aa3.22□□□□□ -1.89
UBE2F-221ENST00000480828 CCM2Q9BSQ5 444 aa3.22□□□□□ -1.89
UBE2F-221ENST00000480828 TCHPQ9BT92 498 aa3.22□□□□□ -1.89
UBE2F-221ENST00000480828 MRPL13Q9BYD1 178 aaKnown RBP3.22□□□□□ -1.89
UBE2F-221ENST00000480828 KRTAP1-5Q9BYS1 174 aa3.22□□□□□ -1.89
UBE2F-221ENST00000480828 NLNQ9BYT8 704 aa3.22□□□□□ -1.89
UBE2F-221ENST00000480828 WDR76Q9H967 626 aa3.22□□□□□ -1.89
UBE2F-221ENST00000480828 FLRT3Q9NZU0 649 aa3.22□□□□□ -1.89
UBE2F-221ENST00000480828 COX16Q9P0S2 106 aa3.22□□□□□ -1.89
UBE2F-221ENST00000480828 ERVK-18Q9QC07 812 aa3.22□□□□□ -1.89
UBE2F-221ENST00000480828 P2RX2Q9UBL9 471 aa3.22□□□□□ -1.89
UBE2F-221ENST00000480828 MAN1B1Q9UKM7 699 aa3.22□□□□□ -1.89
UBE2F-221ENST00000480828 PLCL2Q9UPR0 1127 aa3.22□□□□□ -1.89
UBE2F-221ENST00000480828 KLHDC2Q9Y2U9 406 aa3.22□□□□□ -1.89
UBE2F-221ENST00000480828 KLF2Q9Y5W3 355 aaPredicted RBP3.22□□□□□ -1.89
UBE2F-221ENST00000480828 SF3B1O75533 1304 aaKnown RBP eCLIP3.21□□□□□ -1.89
UBE2F-221ENST00000480828 SHISA7A6NL88 538 aa3.21□□□□□ -1.9
UBE2F-221ENST00000480828 C16orf97H3BN30 126 aa3.21□□□□□ -1.9
UBE2F-221ENST00000480828 SDHDO14521 159 aa3.21□□□□□ -1.9
UBE2F-221ENST00000480828 MAGEB3O15480 346 aa3.21□□□□□ -1.9
UBE2F-221ENST00000480828 EXTL3O43909 919 aa3.21□□□□□ -1.9
UBE2F-221ENST00000480828 PPP1R3DO95685 299 aa3.21□□□□□ -1.9
UBE2F-221ENST00000480828 UGT2B4P06133 528 aa3.21□□□□□ -1.9
UBE2F-221ENST00000480828 UMODP07911 640 aa3.21□□□□□ -1.9
UBE2F-221ENST00000480828 GLRA1P23415 457 aa3.21□□□□□ -1.9
UBE2F-221ENST00000480828 CA8P35219 290 aa3.21□□□□□ -1.9
UBE2F-221ENST00000480828 CCR4P51679 360 aa3.21□□□□□ -1.9
UBE2F-221ENST00000480828 BACE1P56817 501 aa3.21□□□□□ -1.9
UBE2F-221ENST00000480828 CDR2Q01850 454 aa3.21□□□□□ -1.9
UBE2F-221ENST00000480828 SPIBQ01892 262 aa3.21□□□□□ -1.9
UBE2F-221ENST00000480828 LTBQ06643 244 aa3.21□□□□□ -1.9
UBE2F-221ENST00000480828 HSPA14Q0VDF9 509 aa3.21□□□□□ -1.9
UBE2F-221ENST00000480828 NFATC2Q13469 925 aa3.21□□□□□ -1.9
UBE2F-221ENST00000480828 MEF2DQ14814 521 aa3.21□□□□□ -1.9
UBE2F-221ENST00000480828 C3AR1Q16581 482 aa3.21□□□□□ -1.9
UBE2F-221ENST00000480828 ZNF74Q16587 644 aa3.21□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms