RNA–Protein interactions for RNA: ENST00000324771.12

DDR1-223, Transcript of discoidin domain receptor tyrosine kinase 1, human

APPRIS ALT2 TSL 5 BASIC

Gene DDR1, Length 4,148 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDR1-223	ENST00000324771	KAT8	Q9H7Z6	458 aa	Known RBP	11.3	□□□□□ -0.6
DDR1-223	ENST00000324771	ZNF624	Q9P2J8	865 aa	Predicted RBP	11.3	□□□□□ -0.6
DDR1-223	ENST00000324771	TCRBV3S1	A0A5B6	114 aa		11.29	□□□□□ -0.6
DDR1-223	ENST00000324771	FAM170B	A6NMN3	283 aa		11.29	□□□□□ -0.6
DDR1-223	ENST00000324771	SOX30	O94993	753 aa		11.29	□□□□□ -0.6
DDR1-223	ENST00000324771	RGN	Q15493	299 aa		11.29	□□□□□ -0.6
DDR1-223	ENST00000324771	SMN1	Q16637	294 aa	Known RBP	11.29	□□□□□ -0.6
DDR1-223	ENST00000324771	UGT3A2	Q3SY77	523 aa		11.29	□□□□□ -0.6
DDR1-223	ENST00000324771	CRTC2	Q53ET0	693 aa	Predicted RBP	11.29	□□□□□ -0.6
DDR1-223	ENST00000324771	RUNDC3A	Q59EK9	446 aa		11.29	□□□□□ -0.6
DDR1-223	ENST00000324771	TRAF7	Q6Q0C0	670 aa		11.29	□□□□□ -0.6
DDR1-223	ENST00000324771	NRSN1	Q8IZ57	195 aa		11.29	□□□□□ -0.6
DDR1-223	ENST00000324771	ANKFN1	Q8N957	763 aa		11.29	□□□□□ -0.6
DDR1-223	ENST00000324771	POMGNT2	Q8NAT1	580 aa		11.29	□□□□□ -0.6
DDR1-223	ENST00000324771	TTL	Q8NG68	377 aa		11.29	□□□□□ -0.6
DDR1-223	ENST00000324771	OR6K6	Q8NGW6	343 aa		11.29	□□□□□ -0.6
DDR1-223	ENST00000324771	THAP3	Q8WTV1	239 aa	Predicted RBP	11.29	□□□□□ -0.6
DDR1-223	ENST00000324771	PDLIM5	Q96HC4	596 aa	Known RBP	11.29	□□□□□ -0.6
DDR1-223	ENST00000324771	DEPDC7	Q96QD5	511 aa		11.29	□□□□□ -0.6
DDR1-223	ENST00000324771	DZANK1	Q9NVP4	752 aa		11.29	□□□□□ -0.6
DDR1-223	ENST00000324771	HSFX1	Q9UBD0	423 aa		11.29	□□□□□ -0.6
DDR1-223	ENST00000324771	IKZF2	Q9UKS7	526 aa		11.29	□□□□□ -0.6
DDR1-223	ENST00000324771	ABCG2	Q9UNQ0	655 aa		11.29	□□□□□ -0.6
DDR1-223	ENST00000324771	BTBD3	Q9Y2F9	522 aa		11.29	□□□□□ -0.6
DDR1-223	ENST00000324771	TLR4	O00206	839 aa		11.29	□□□□□ -0.6
DDR1-223	ENST00000324771	OR5F1	O95221	314 aa		11.29	□□□□□ -0.6
DDR1-223	ENST00000324771	TSPAN12	O95859	305 aa		11.29	□□□□□ -0.6
DDR1-223	ENST00000324771	JUND	P17535	347 aa		11.29	□□□□□ -0.6
DDR1-223	ENST00000324771	SLC9A3	P48764	834 aa		11.29	□□□□□ -0.6
DDR1-223	ENST00000324771	BLK	P51451	505 aa		11.29	□□□□□ -0.6
DDR1-223	ENST00000324771	RTL4	Q6ZR62	310 aa		11.29	□□□□□ -0.6
DDR1-223	ENST00000324771	NLGN4X	Q8N0W4	816 aa		11.29	□□□□□ -0.6
DDR1-223	ENST00000324771	MMP21	Q8N119	569 aa		11.29	□□□□□ -0.6
DDR1-223	ENST00000324771	CAMKV	Q8NCB2	501 aa		11.29	□□□□□ -0.6
DDR1-223	ENST00000324771	OR51A7	Q8NH64	312 aa		11.29	□□□□□ -0.6
DDR1-223	ENST00000324771	MMAB	Q96EY8	250 aa	Predicted RBP	11.29	□□□□□ -0.6
DDR1-223	ENST00000324771	HHIP	Q96QV1	700 aa		11.29	□□□□□ -0.6
DDR1-223	ENST00000324771	SERHL2	Q9H4I8	314 aa		11.29	□□□□□ -0.6
DDR1-223	ENST00000324771	SERHL	Q9NQF3	203 aa		11.29	□□□□□ -0.6
DDR1-223	ENST00000324771	HCN3	Q9P1Z3	774 aa		11.29	□□□□□ -0.6
DDR1-223	ENST00000324771	PPIE	Q9UNP9	301 aa	Known RBP	11.29	□□□□□ -0.6
DDR1-223	ENST00000324771	HCN4	Q9Y3Q4	1203 aa		11.29	□□□□□ -0.6
DDR1-223	ENST00000324771	HEBP2	Q9Y5Z4	205 aa		11.29	□□□□□ -0.6
DDR1-223	ENST00000324771	LTBP1	Q14766	1721 aa		11.29	□□□□□ -0.6
DDR1-223	ENST00000324771	LOC110117498-PIK3R3	F6TDL0	507 aa		11.29	□□□□□ -0.6
DDR1-223	ENST00000324771	SLC25A12	O75746	678 aa		11.29	□□□□□ -0.6
DDR1-223	ENST00000324771	STS	P08842	583 aa		11.29	□□□□□ -0.6
DDR1-223	ENST00000324771	PRLHR	P49683	370 aa		11.29	□□□□□ -0.6
DDR1-223	ENST00000324771	PYDC2	Q56P42	97 aa		11.29	□□□□□ -0.6
DDR1-223	ENST00000324771	COLEC12	Q5KU26	742 aa		11.29	□□□□□ -0.6
DDR1-223	ENST00000324771	EOGT	Q5NDL2	527 aa		11.29	□□□□□ -0.6
DDR1-223	ENST00000324771	MLIP	Q5VWP3	458 aa		11.29	□□□□□ -0.6
DDR1-223	ENST00000324771	PRR23B	Q6ZRT6	265 aa		11.29	□□□□□ -0.6
DDR1-223	ENST00000324771	FAM92B	Q6ZTR7	304 aa		11.29	□□□□□ -0.6
DDR1-223	ENST00000324771	TMEM150A	Q86TG1	271 aa		11.29	□□□□□ -0.6
DDR1-223	ENST00000324771	TGM7	Q96PF1	710 aa		11.29	□□□□□ -0.6
DDR1-223	ENST00000324771	INSM2	Q96T92	566 aa	Predicted RBP	11.29	□□□□□ -0.6
DDR1-223	ENST00000324771	RPP25	Q9BUL9	199 aa	Known RBP	11.29	□□□□□ -0.6
DDR1-223	ENST00000324771	ANKRA2	Q9H9E1	313 aa		11.29	□□□□□ -0.6
DDR1-223	ENST00000324771	RDH14	Q9HBH5	336 aa		11.29	□□□□□ -0.6
DDR1-223	ENST00000324771	NEUROD4	Q9HD90	331 aa		11.29	□□□□□ -0.6
DDR1-223	ENST00000324771	DMRT3	Q9NQL9	472 aa		11.29	□□□□□ -0.6
DDR1-223	ENST00000324771	ZC4H2	Q9NQZ6	224 aa		11.29	□□□□□ -0.6
DDR1-223	ENST00000324771	MBNL1	Q9NR56	388 aa	Known RBP	11.29	□□□□□ -0.6
DDR1-223	ENST00000324771	NLGN3	Q9NZ94	848 aa		11.29	□□□□□ -0.6
DDR1-223	ENST00000324771	FER1L6	Q2WGJ9	1857 aa		11.29	□□□□□ -0.6
DDR1-223	ENST00000324771	MRPL28	Q13084	256 aa	Known RBP	11.28	□□□□□ -0.6
DDR1-223	ENST00000324771	PMS2P3	Q13401	168 aa		11.28	□□□□□ -0.6
DDR1-223	ENST00000324771	GALNT7	Q86SF2	657 aa		11.28	□□□□□ -0.6
DDR1-223	ENST00000324771	IQCF1	Q8N6M8	205 aa		11.28	□□□□□ -0.6
DDR1-223	ENST00000324771	OR52E1	Q8NGJ3	308 aa		11.28	□□□□□ -0.6
DDR1-223	ENST00000324771	APOO	Q9BUR5	198 aa		11.28	□□□□□ -0.6
DDR1-223	ENST00000324771	TSSK6	Q9BXA6	273 aa		11.28	□□□□□ -0.6
DDR1-223	ENST00000324771	GSDMC	Q9BYG8	508 aa		11.28	□□□□□ -0.6
DDR1-223	ENST00000324771	IKZF5	Q9H5V7	419 aa		11.28	□□□□□ -0.6
DDR1-223	ENST00000324771	GDE1	Q9NZC3	331 aa		11.28	□□□□□ -0.6
DDR1-223	ENST00000324771	MBD1	Q9UIS9	605 aa	Predicted RBP	11.28	□□□□□ -0.6
DDR1-223	ENST00000324771	NPIPA5	A0A0B4J1W7	369 aa		11.28	□□□□□ -0.6
DDR1-223	ENST00000324771	FAM86C2P	A6NEL3	165 aa		11.28	□□□□□ -0.6
DDR1-223	ENST00000324771	WASHC1	A8K0Z3	465 aa		11.28	□□□□□ -0.6
DDR1-223	ENST00000324771	NPIPA7	E9PJI5	369 aa		11.28	□□□□□ -0.6
DDR1-223	ENST00000324771	INMT	O95050	263 aa		11.28	□□□□□ -0.6
DDR1-223	ENST00000324771	NPIPA8	P0DM63	369 aa		11.28	□□□□□ -0.6
DDR1-223	ENST00000324771	ACPP	P15309	386 aa		11.28	□□□□□ -0.6
DDR1-223	ENST00000324771	NDUFS1	P28331	727 aa		11.28	□□□□□ -0.6
DDR1-223	ENST00000324771	CTBS	Q01459	385 aa		11.28	□□□□□ -0.6
DDR1-223	ENST00000324771	ST3GAL4	Q11206	333 aa		11.28	□□□□□ -0.6
DDR1-223	ENST00000324771	NPRL3	Q12980	569 aa		11.28	□□□□□ -0.6
DDR1-223	ENST00000324771	UGT2A3	Q6UWM9	527 aa		11.28	□□□□□ -0.6
DDR1-223	ENST00000324771	WASH2P	Q6VEQ5	465 aa		11.28	□□□□□ -0.6
DDR1-223	ENST00000324771	NUP43	Q8NFH3	380 aa		11.28	□□□□□ -0.6
DDR1-223	ENST00000324771	MCHR1	Q99705	422 aa		11.28	□□□□□ -0.6
DDR1-223	ENST00000324771	NRTN	Q99748	197 aa		11.28	□□□□□ -0.6
DDR1-223	ENST00000324771	UCK2	Q9BZX2	261 aa		11.28	□□□□□ -0.6
DDR1-223	ENST00000324771	MS4A12	Q9NXJ0	267 aa		11.28	□□□□□ -0.6
DDR1-223	ENST00000324771	ZNF225	Q9UK10	706 aa		11.28	□□□□□ -0.6
DDR1-223	ENST00000324771	PCDHGA8	Q9Y5G5	932 aa		11.28	□□□□□ -0.6
DDR1-223	ENST00000324771	RTTN	Q86VV8	2226 aa		11.28	□□□□□ -0.6
DDR1-223	ENST00000324771		A6NHS1	94 aa		11.28	□□□□□ -0.6
DDR1-223	ENST00000324771	BOLA2-SMG1P6	H3BVE0	249 aa		11.28	□□□□□ -0.6

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