RNA–Protein interactions for RNA: ENST00000301280.9

CHAF1A-201, Transcript of chromatin assembly factor 1 subunit A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHAF1A, Length 3,339 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHAF1A-201ENST00000301280 ST3GAL4Q11206 333 aa14.86□□□□□ -0.03
CHAF1A-201ENST00000301280 CCDC85BQ15834 202 aaPredicted RBP14.86□□□□□ -0.03
CHAF1A-201ENST00000301280 C9orf50Q5SZB4 431 aa14.86□□□□□ -0.03
CHAF1A-201ENST00000301280 C9orf64Q5T6V5 341 aa14.86□□□□□ -0.03
CHAF1A-201ENST00000301280 KIAA1324Q6UXG2 1013 aaKnown RBP14.86□□□□□ -0.03
CHAF1A-201ENST00000301280 EIF3MQ7L2H7 374 aaKnown RBP14.86□□□□□ -0.03
CHAF1A-201ENST00000301280 CADM3Q8N126 398 aa14.86□□□□□ -0.03
CHAF1A-201ENST00000301280 HORMAD2Q8N7B1 307 aa14.86□□□□□ -0.03
CHAF1A-201ENST00000301280 ZFP41Q8N8Y5 198 aa14.86□□□□□ -0.03
CHAF1A-201ENST00000301280 ABHD8Q96I13 439 aa14.86□□□□□ -0.03
CHAF1A-201ENST00000301280 SLX1AQ9BQ83 275 aa14.86□□□□□ -0.03
CHAF1A-201ENST00000301280 DOHHQ9BU89 302 aa14.86□□□□□ -0.03
CHAF1A-201ENST00000301280 SEMA3GQ9NS98 782 aa14.86□□□□□ -0.03
CHAF1A-201ENST00000301280 ATAD3AQ9NVI7 634 aa14.86□□□□□ -0.03
CHAF1A-201ENST00000301280 TAS2R9Q9NYW1 312 aa14.86□□□□□ -0.03
CHAF1A-201ENST00000301280 EFCAB9A8MZ26 197 aa14.86□□□□□ -0.03
CHAF1A-201ENST00000301280 SLC9A3R1O14745 358 aaPredicted RBP14.86□□□□□ -0.03
CHAF1A-201ENST00000301280 AIREO43918 545 aa14.86□□□□□ -0.03
CHAF1A-201ENST00000301280 GMFGO60234 142 aa14.86□□□□□ -0.03
CHAF1A-201ENST00000301280 SCN2BO60939 215 aa14.86□□□□□ -0.03
CHAF1A-201ENST00000301280 PSIP1O75475 530 aaKnown RBP14.86□□□□□ -0.03
CHAF1A-201ENST00000301280 SEMG1P04279 462 aa14.86□□□□□ -0.03
CHAF1A-201ENST00000301280 HOXD12P35452 270 aa14.86□□□□□ -0.03
CHAF1A-201ENST00000301280 ATP6V1E1P36543 226 aa14.86□□□□□ -0.03
CHAF1A-201ENST00000301280 ASMTP46597 345 aa14.86□□□□□ -0.03
CHAF1A-201ENST00000301280 TGM4P49221 684 aa14.86□□□□□ -0.03
CHAF1A-201ENST00000301280 TECPR1Q7Z6L1 1165 aa14.86□□□□□ -0.03
CHAF1A-201ENST00000301280 CCDC71Q8IV32 467 aaPredicted RBP14.86□□□□□ -0.03
CHAF1A-201ENST00000301280 CPA6Q8N4T0 437 aa14.86□□□□□ -0.03
CHAF1A-201ENST00000301280 DEFB119Q8N690 84 aa14.86□□□□□ -0.03
CHAF1A-201ENST00000301280 ZNF513Q8N8E2 541 aaPredicted RBP14.86□□□□□ -0.03
CHAF1A-201ENST00000301280 MCFD2Q8NI22 146 aa14.86□□□□□ -0.03
CHAF1A-201ENST00000301280 RAB2BQ8WUD1 216 aa14.86□□□□□ -0.03
CHAF1A-201ENST00000301280 SLC9A6Q92581 669 aa14.86□□□□□ -0.03
CHAF1A-201ENST00000301280 GPATCH2Q9NW75 528 aa14.86□□□□□ -0.03
CHAF1A-201ENST00000301280 FBXL12Q9NXK8 326 aa14.86□□□□□ -0.03
CHAF1A-201ENST00000301280 NDUFAF4Q9P032 175 aa14.86□□□□□ -0.03
CHAF1A-201ENST00000301280 TMCC3Q9ULS5 477 aa14.86□□□□□ -0.03
CHAF1A-201ENST00000301280 EXO1Q9UQ84 846 aaKnown RBP14.86□□□□□ -0.03
CHAF1A-201ENST00000301280 PCDHGA10Q9Y5H3 936 aa14.86□□□□□ -0.03
CHAF1A-201ENST00000301280 MUC22E2RYF6 1773 aaPredicted RBP14.86□□□□□ -0.03
CHAF1A-201ENST00000301280 NDUFS4O43181 175 aa14.86□□□□□ -0.03
CHAF1A-201ENST00000301280 UGT2B11O75310 529 aa14.86□□□□□ -0.03
CHAF1A-201ENST00000301280 GADD45AP24522 165 aa14.86□□□□□ -0.03
CHAF1A-201ENST00000301280 AVPR1BP47901 424 aa14.86□□□□□ -0.03
CHAF1A-201ENST00000301280 LBX1P52954 281 aa14.86□□□□□ -0.03
CHAF1A-201ENST00000301280 OXA1LQ15070 435 aa14.86□□□□□ -0.03
CHAF1A-201ENST00000301280 MPEG1Q2M385 716 aa14.86□□□□□ -0.03
CHAF1A-201ENST00000301280 RFX4Q33E94 735 aa14.86□□□□□ -0.03
CHAF1A-201ENST00000301280 DEPDC1Q5TB30 811 aa14.86□□□□□ -0.03
CHAF1A-201ENST00000301280 ANXA8L1Q5VT79 327 aa14.86□□□□□ -0.03
CHAF1A-201ENST00000301280 SHQ1Q6PI26 577 aaKnown RBP14.86□□□□□ -0.03
CHAF1A-201ENST00000301280 FAM9CQ8IZT9 166 aa14.86□□□□□ -0.03
CHAF1A-201ENST00000301280 PUM2Q8TB72 1066 aaKnown RBP eCLIP14.86□□□□□ -0.033e-12■■■■■ 49.7
CHAF1A-201ENST00000301280 FAR1Q8WVX9 515 aa14.86□□□□□ -0.03
CHAF1A-201ENST00000301280 TESCQ96BS2 214 aa14.86□□□□□ -0.03
CHAF1A-201ENST00000301280 GABARAPL1Q9H0R8 117 aa14.86□□□□□ -0.03
CHAF1A-201ENST00000301280 KLHL31Q9H511 634 aa14.86□□□□□ -0.03
CHAF1A-201ENST00000301280 RNF6Q9Y252 685 aa14.86□□□□□ -0.03
CHAF1A-201ENST00000301280 TMED5Q9Y3A6 229 aa14.86□□□□□ -0.03
CHAF1A-201ENST00000301280 PMF1-BGLAPU3KQ54 211 aa14.86□□□□□ -0.03
CHAF1A-201ENST00000301280 ALPK3Q96L96 1907 aa14.85□□□□□ -0.03
CHAF1A-201ENST00000301280 NUP210Q8TEM1 1887 aaPredicted RBP14.85□□□□□ -0.03
CHAF1A-201ENST00000301280 KPNA4O00629 521 aaPredicted RBP14.85□□□□□ -0.03
CHAF1A-201ENST00000301280 GNB5O14775 395 aa14.85□□□□□ -0.03
CHAF1A-201ENST00000301280 DSTNP60981 165 aa14.85□□□□□ -0.03
CHAF1A-201ENST00000301280 TIGD6Q17RP2 521 aa14.85□□□□□ -0.03
CHAF1A-201ENST00000301280 WSCD2Q2TBF2 565 aa14.85□□□□□ -0.03
CHAF1A-201ENST00000301280 HNRNPA1L2Q32P51 320 aaKnown RBP14.85□□□□□ -0.03
CHAF1A-201ENST00000301280 RBM48Q5RL73 367 aaKnown RBP14.85□□□□□ -0.03
CHAF1A-201ENST00000301280 RRM2BQ7LG56 351 aa14.85□□□□□ -0.03
CHAF1A-201ENST00000301280 TSACCQ96A04 125 aaPredicted RBP14.85□□□□□ -0.03
CHAF1A-201ENST00000301280 TMEM19Q96HH6 336 aa14.85□□□□□ -0.03
CHAF1A-201ENST00000301280 TTTY10Q9BZA0 68 aa14.85□□□□□ -0.03
CHAF1A-201ENST00000301280 SLC13A4Q9UKG4 626 aa14.85□□□□□ -0.03
CHAF1A-201ENST00000301280 PCDHGB3Q9Y5G1 929 aa14.85□□□□□ -0.03
CHAF1A-201ENST00000301280 ANHXE9PGG2 379 aa14.85□□□□□ -0.03
CHAF1A-201ENST00000301280 KAT7O95251 611 aa14.85□□□□□ -0.03
CHAF1A-201ENST00000301280 PCMT1P22061 227 aa14.85□□□□□ -0.03
CHAF1A-201ENST00000301280 GRK3P35626 688 aa14.85□□□□□ -0.03
CHAF1A-201ENST00000301280 NCBP2P52298 156 aaKnown RBP eCLIP14.85□□□□□ -0.038e-8■■■■■ 33.5
CHAF1A-201ENST00000301280 ELAVL3Q14576 367 aaKnown RBP14.85□□□□□ -0.03
CHAF1A-201ENST00000301280 ZC3H12BQ5HYM0 836 aaKnown RBP14.85□□□□□ -0.03
CHAF1A-201ENST00000301280 DPPA4Q7L190 304 aa14.85□□□□□ -0.03
CHAF1A-201ENST00000301280 DSG4Q86SJ6 1040 aa14.85□□□□□ -0.03
CHAF1A-201ENST00000301280 ENTHD1Q8IYW4 607 aa14.85□□□□□ -0.03
CHAF1A-201ENST00000301280 KRT78Q8N1N4 520 aa14.85□□□□□ -0.03
CHAF1A-201ENST00000301280 SLAMF7Q9NQ25 335 aa14.85□□□□□ -0.03
CHAF1A-201ENST00000301280 LRRK1Q38SD2 2015 aa14.85□□□□□ -0.03
CHAF1A-201ENST00000301280 TRBV4-1A0A0J9YWV2 114 aa14.84□□□□□ -0.03
CHAF1A-201ENST00000301280 HTR3EA5X5Y0 456 aa14.84□□□□□ -0.03
CHAF1A-201ENST00000301280 PLPP1O14494 284 aa14.84□□□□□ -0.03
CHAF1A-201ENST00000301280 IFNW1P05000 195 aa14.84□□□□□ -0.03
CHAF1A-201ENST00000301280 HOXA9P31269 272 aa14.84□□□□□ -0.03
CHAF1A-201ENST00000301280 CNR2P34972 360 aa14.84□□□□□ -0.03
CHAF1A-201ENST00000301280 LIPAP38571 399 aa14.84□□□□□ -0.03
CHAF1A-201ENST00000301280 GABARAPL2P60520 117 aa14.84□□□□□ -0.03
CHAF1A-201ENST00000301280 TFF2Q03403 129 aa14.84□□□□□ -0.03
CHAF1A-201ENST00000301280 ZNF33BQ06732 778 aa14.84□□□□□ -0.03
CHAF1A-201ENST00000301280 MAD2L1BPQ15013 274 aaPredicted RBP14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms