RNA–Protein interactions for RNA: ENST00000473212.1

COL18A1-207, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 2

Gene COL18A1, Length 2,515 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-207ENST00000473212 TRIM40Q6P9F5 258 aa20.15■□□□□ 0.82
COL18A1-207ENST00000473212 WDR53Q7Z5U6 358 aaPredicted RBP20.15■□□□□ 0.82
COL18A1-207ENST00000473212 NRARPQ7Z6K4 114 aa20.15■□□□□ 0.82
COL18A1-207ENST00000473212 SLC44A2Q8IWA5 706 aaPredicted RBP20.15■□□□□ 0.82
COL18A1-207ENST00000473212 PHF6Q8IWS0 365 aaKnown RBP eCLIP20.15■□□□□ 0.82
COL18A1-207ENST00000473212 VANGL1Q8TAA9 524 aaPredicted RBP20.15■□□□□ 0.82
COL18A1-207ENST00000473212 PUM2Q8TB72 1066 aaKnown RBP eCLIP20.15■□□□□ 0.828e-7■■■□□ 17.4
COL18A1-207ENST00000473212 BTN2A2Q8WVV5 523 aa20.15■□□□□ 0.82
COL18A1-207ENST00000473212 CCDC32Q9BV29 185 aa20.15■□□□□ 0.82
COL18A1-207ENST00000473212 TAPBPLQ9BX59 468 aa20.15■□□□□ 0.82
COL18A1-207ENST00000473212 SMURF1Q9HCE7 757 aa20.15■□□□□ 0.82
COL18A1-207ENST00000473212 SPG21Q9NZD8 308 aa20.15■□□□□ 0.82
COL18A1-207ENST00000473212 ENPP4Q9Y6X5 453 aa20.15■□□□□ 0.82
COL18A1-207ENST00000473212 PLXNA2O75051 1894 aa20.15■□□□□ 0.82
COL18A1-207ENST00000473212 AP3D1O14617 1153 aa20.14■□□□□ 0.82
COL18A1-207ENST00000473212 LRG1P02750 347 aa20.14■□□□□ 0.82
COL18A1-207ENST00000473212 C8AP07357 584 aa20.14■□□□□ 0.82
COL18A1-207ENST00000473212 FURINP09958 794 aa20.14■□□□□ 0.82
COL18A1-207ENST00000473212 TYRP14679 529 aa20.14■□□□□ 0.82
COL18A1-207ENST00000473212 NPPBP16860 134 aa20.14■□□□□ 0.82
COL18A1-207ENST00000473212 RPS19P39019 145 aaKnown RBP20.14■□□□□ 0.82
COL18A1-207ENST00000473212 HMGA2P52926 109 aa20.14■□□□□ 0.82
COL18A1-207ENST00000473212 TAS2R50P59544 299 aa20.14■□□□□ 0.82
COL18A1-207ENST00000473212 ELOAQ14241 798 aaKnown RBP20.14■□□□□ 0.82
COL18A1-207ENST00000473212 RPS26P11Q5JNZ5 115 aaPredicted RBP20.14■□□□□ 0.82
COL18A1-207ENST00000473212 TMC5Q6UXY8 1006 aa20.14■□□□□ 0.82
COL18A1-207ENST00000473212 LSRQ86X29 649 aaPredicted RBP20.14■□□□□ 0.82
COL18A1-207ENST00000473212 PXYLP1Q8TE99 480 aa20.14■□□□□ 0.82
COL18A1-207ENST00000473212 PPCDCQ96CD2 204 aa20.14■□□□□ 0.82
COL18A1-207ENST00000473212 CXorf40BQ96DE9 158 aa20.14■□□□□ 0.82
COL18A1-207ENST00000473212 NEDD4LQ96PU5 975 aa20.14■□□□□ 0.82
COL18A1-207ENST00000473212 OR2A14Q96R47 310 aa20.14■□□□□ 0.82
COL18A1-207ENST00000473212 ASPNQ9BXN1 380 aa20.14■□□□□ 0.82
COL18A1-207ENST00000473212 CREBZFQ9NS37 354 aa20.14■□□□□ 0.82
COL18A1-207ENST00000473212 CRNNQ9UBG3 495 aaPredicted RBP20.14■□□□□ 0.82
COL18A1-207ENST00000473212 ZNF221Q9UK13 617 aa20.14■□□□□ 0.82
COL18A1-207ENST00000473212 KCNE2Q9Y6J6 123 aa20.14■□□□□ 0.82
COL18A1-207ENST00000473212 KIAA1671Q9BY89 1806 aa20.14■□□□□ 0.81
COL18A1-207ENST00000473212 CKAP5Q14008 2032 aa20.14■□□□□ 0.81
COL18A1-207ENST00000473212 GPR37L1O60883 481 aa20.14■□□□□ 0.81
COL18A1-207ENST00000473212 ENTPD6O75354 484 aa20.14■□□□□ 0.81
COL18A1-207ENST00000473212 KLK1P06870 262 aa20.14■□□□□ 0.81
COL18A1-207ENST00000473212 FEN1P39748 380 aaKnown RBP20.14■□□□□ 0.81
COL18A1-207ENST00000473212 HTR3AP46098 478 aa20.14■□□□□ 0.81
COL18A1-207ENST00000473212 DUSP7Q16829 419 aa20.14■□□□□ 0.81
COL18A1-207ENST00000473212 TAGAPQ8N103 731 aa20.14■□□□□ 0.81
COL18A1-207ENST00000473212 OR6F1Q8NGZ6 308 aa20.14■□□□□ 0.81
COL18A1-207ENST00000473212 BARHL1Q9BZE3 327 aa20.14■□□□□ 0.81
COL18A1-207ENST00000473212 HHATLQ9HCP6 504 aa20.14■□□□□ 0.81
COL18A1-207ENST00000473212 CLEC2DQ9UHP7 191 aa20.14■□□□□ 0.81
COL18A1-207ENST00000473212 AP2A2O94973 939 aa20.13■□□□□ 0.81
COL18A1-207ENST00000473212 SLITRK5O94991 958 aa20.13■□□□□ 0.81
COL18A1-207ENST00000473212 CD72P21854 359 aa20.13■□□□□ 0.81
COL18A1-207ENST00000473212 HOXD10P28358 340 aa20.13■□□□□ 0.81
COL18A1-207ENST00000473212 TIE1P35590 1138 aa20.13■□□□□ 0.81
COL18A1-207ENST00000473212 POLR2LP62875 67 aaKnown RBP20.13■□□□□ 0.81
COL18A1-207ENST00000473212 ZMAT1Q5H9K5 638 aa20.13■□□□□ 0.81
COL18A1-207ENST00000473212 UBQLNLQ8IYU4 475 aa20.13■□□□□ 0.81
COL18A1-207ENST00000473212 GLYATL1Q969I3 302 aa20.13■□□□□ 0.81
COL18A1-207ENST00000473212 IL17FQ96PD4 163 aa20.13■□□□□ 0.81
COL18A1-207ENST00000473212 PLAGL1Q9UM63 463 aa20.13■□□□□ 0.81
COL18A1-207ENST00000473212 N6AMT1Q9Y5N5 214 aa20.13■□□□□ 0.81
COL18A1-207ENST00000473212 A0A075B6Q4 140 aa20.13■□□□□ 0.81
COL18A1-207ENST00000473212 IDH3BO43837 385 aa20.13■□□□□ 0.81
COL18A1-207ENST00000473212 MPZL2O60487 215 aa20.13■□□□□ 0.81
COL18A1-207ENST00000473212 IFNA14P01570 189 aa20.13■□□□□ 0.81
COL18A1-207ENST00000473212 RHCEP18577 417 aa20.13■□□□□ 0.81
COL18A1-207ENST00000473212 RECQLP46063 649 aaPredicted RBP20.13■□□□□ 0.81
COL18A1-207ENST00000473212 ZNF630Q2M218 657 aaPredicted RBP20.13■□□□□ 0.81
COL18A1-207ENST00000473212 LY6G5CQ5SRR4 150 aa20.13■□□□□ 0.81
COL18A1-207ENST00000473212 ATAD3CQ5T2N8 411 aa20.13■□□□□ 0.81
COL18A1-207ENST00000473212 ZNF544Q6NX49 715 aa20.13■□□□□ 0.81
COL18A1-207ENST00000473212 CFAP206Q8IYR0 622 aa20.13■□□□□ 0.81
COL18A1-207ENST00000473212 FLCNQ8NFG4 579 aa20.13■□□□□ 0.81
COL18A1-207ENST00000473212 GPR151Q8TDV0 419 aa20.13■□□□□ 0.81
COL18A1-207ENST00000473212 C16orf78Q8WTQ4 265 aa20.13■□□□□ 0.81
COL18A1-207ENST00000473212 ABCG4Q9H172 646 aa20.13■□□□□ 0.81
COL18A1-207ENST00000473212 MUTYHQ9UIF7 546 aa20.13■□□□□ 0.81
COL18A1-207ENST00000473212 ATG13O75143 517 aa20.12■□□□□ 0.81
COL18A1-207ENST00000473212 PCBP3P57721 371 aaKnown RBP20.12■□□□□ 0.81
COL18A1-207ENST00000473212 DDX53Q86TM3 631 aaKnown RBP20.12■□□□□ 0.81
COL18A1-207ENST00000473212 GATAD2AQ86YP4 633 aa20.12■□□□□ 0.81
COL18A1-207ENST00000473212 TRAM1L1Q8N609 369 aa20.12■□□□□ 0.81
COL18A1-207ENST00000473212 FAM46DQ8NEK8 389 aa20.12■□□□□ 0.81
COL18A1-207ENST00000473212 ST13P5Q8NFI4 369 aaPredicted RBP20.12■□□□□ 0.81
COL18A1-207ENST00000473212 AP2M1Q96CW1 435 aa20.12■□□□□ 0.81
COL18A1-207ENST00000473212 DEFB118Q96PH6 123 aa20.12■□□□□ 0.81
COL18A1-207ENST00000473212 ACAT2Q9BWD1 397 aa20.12■□□□□ 0.81
COL18A1-207ENST00000473212 DYRK4Q9NR20 520 aa20.12■□□□□ 0.81
COL18A1-207ENST00000473212 TAS2R9Q9NYW1 312 aa20.12■□□□□ 0.81
COL18A1-207ENST00000473212 C5AR2Q9P296 337 aa20.12■□□□□ 0.81
COL18A1-207ENST00000473212 ENOPH1Q9UHY7 261 aa20.12■□□□□ 0.81
COL18A1-207ENST00000473212 NOX1Q9Y5S8 564 aa20.12■□□□□ 0.81
COL18A1-207ENST00000473212 TRBV4-1A0A0J9YWV2 114 aa20.12■□□□□ 0.81
COL18A1-207ENST00000473212 RGS13O14921 159 aa20.12■□□□□ 0.81
COL18A1-207ENST00000473212 SOX14O95416 240 aa20.12■□□□□ 0.81
COL18A1-207ENST00000473212 C1orf105O95561 183 aa20.12■□□□□ 0.81
COL18A1-207ENST00000473212 IFNW1P05000 195 aa20.12■□□□□ 0.81
COL18A1-207ENST00000473212 OPRD1P41143 372 aa20.12■□□□□ 0.81
COL18A1-207ENST00000473212 PRLHRP49683 370 aa20.12■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms