RNA–Protein interactions for RNA: ENSMUST00000106865.7

Ccdc47-202, Transcript of Coiled-coil domain-containing protein 47, mousemouse

TSL 1 (best) BASIC

Gene Ccdc47, Length 704 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc47-202ENSMUST00000106865 Mfsd4b4J3QNS5 503 aa6.85□□□□□ -1.31
Ccdc47-202ENSMUST00000106865 Gm3591K7N6X2 186 aa6.85□□□□□ -1.31
Ccdc47-202ENSMUST00000106865 Vmn2r8L7N472 848 aa6.85□□□□□ -1.31
Ccdc47-202ENSMUST00000106865 RfngO09009 332 aa6.85□□□□□ -1.31
Ccdc47-202ENSMUST00000106865 Hes2O54792 157 aa6.85□□□□□ -1.31
Ccdc47-202ENSMUST00000106865 Aff2O55112 1272 aa6.85□□□□□ -1.31
Ccdc47-202ENSMUST00000106865 Tlx3O55144 291 aa6.85□□□□□ -1.31
Ccdc47-202ENSMUST00000106865 Gtf2h4O70422 463 aaKnown RBP6.85□□□□□ -1.31
Ccdc47-202ENSMUST00000106865 Scrg1O88745 98 aa6.85□□□□□ -1.31
Ccdc47-202ENSMUST00000106865 St3gal5O88829 414 aa6.85□□□□□ -1.31
Ccdc47-202ENSMUST00000106865 Gnpda1O88958 289 aa6.85□□□□□ -1.31
Ccdc47-202ENSMUST00000106865 FhitO89106 150 aa6.85□□□□□ -1.31
Ccdc47-202ENSMUST00000106865 P01636 108 aa6.85□□□□□ -1.31
Ccdc47-202ENSMUST00000106865 Ccdc153P0C7Q1 202 aa6.85□□□□□ -1.31
Ccdc47-202ENSMUST00000106865 Nid1P10493 1245 aa6.85□□□□□ -1.31
Ccdc47-202ENSMUST00000106865 SrgnP13609 152 aa6.85□□□□□ -1.31
Ccdc47-202ENSMUST00000106865 Ugt2b17P17717 530 aa6.85□□□□□ -1.31
Ccdc47-202ENSMUST00000106865 Cr2P19070 1025 aa6.85□□□□□ -1.31
Ccdc47-202ENSMUST00000106865 Prdx3P20108 257 aa6.85□□□□□ -1.31
Ccdc47-202ENSMUST00000106865 Psmb9P28076 219 aa6.85□□□□□ -1.31
Ccdc47-202ENSMUST00000106865 WarsP32921 481 aa6.85□□□□□ -1.31
Ccdc47-202ENSMUST00000106865 Slc19a1P41438 512 aa6.85□□□□□ -1.31
Ccdc47-202ENSMUST00000106865 Ccr7P47774 378 aa6.85□□□□□ -1.31
Ccdc47-202ENSMUST00000106865 Erp29P57759 262 aaKnown RBP6.85□□□□□ -1.31
Ccdc47-202ENSMUST00000106865 Dnajc30P59041 219 aa6.85□□□□□ -1.31
Ccdc47-202ENSMUST00000106865 Ptchd3Q0EEE2 906 aa6.85□□□□□ -1.31
Ccdc47-202ENSMUST00000106865 Q3KNL4 93 aa6.85□□□□□ -1.31
Ccdc47-202ENSMUST00000106865 Kcnk9Q3LS21 402 aa6.85□□□□□ -1.31
Ccdc47-202ENSMUST00000106865 Hk3Q3TRM8 922 aa6.85□□□□□ -1.31
Ccdc47-202ENSMUST00000106865 Krt2Q3TTY5 707 aa6.85□□□□□ -1.31
Ccdc47-202ENSMUST00000106865 Xrra1Q3U3V8 786 aa6.85□□□□□ -1.31
Ccdc47-202ENSMUST00000106865 Dtx3lQ3UIR3 748 aa6.85□□□□□ -1.31
Ccdc47-202ENSMUST00000106865 BtrcQ3ULA2 605 aaKnown RBP6.85□□□□□ -1.31
Ccdc47-202ENSMUST00000106865 Zmat1Q3V0C1 714 aa6.85□□□□□ -1.31
Ccdc47-202ENSMUST00000106865 Rassf5Q5EBH1 413 aa6.85□□□□□ -1.31
Ccdc47-202ENSMUST00000106865 JrkQ60976 557 aa6.85□□□□□ -1.31
Ccdc47-202ENSMUST00000106865 Nfe2l1Q61985 741 aa6.85□□□□□ -1.31
Ccdc47-202ENSMUST00000106865 Prkd1Q62101 918 aa6.85□□□□□ -1.31
Ccdc47-202ENSMUST00000106865 RhocQ62159 193 aa6.85□□□□□ -1.31
Ccdc47-202ENSMUST00000106865 N4bp1Q6A037 893 aa6.85□□□□□ -1.31
Ccdc47-202ENSMUST00000106865 Otud6aQ6IE21 290 aa6.85□□□□□ -1.31
Ccdc47-202ENSMUST00000106865 Rexo4Q6PAQ4 432 aaKnown RBP6.85□□□□□ -1.31
Ccdc47-202ENSMUST00000106865 Dclk2Q6PGN3 756 aa6.85□□□□□ -1.31
Ccdc47-202ENSMUST00000106865 Rbbp8Q80YR6 893 aa6.85□□□□□ -1.31
Ccdc47-202ENSMUST00000106865 Pcdh20Q8BIZ0 952 aa6.85□□□□□ -1.31
Ccdc47-202ENSMUST00000106865 Cox15Q8BJ03 413 aa6.85□□□□□ -1.31
Ccdc47-202ENSMUST00000106865 Tmem214Q8BM55 687 aaKnown RBP6.85□□□□□ -1.31
Ccdc47-202ENSMUST00000106865 Tusc3Q8BTV1 347 aa6.85□□□□□ -1.31
Ccdc47-202ENSMUST00000106865 Rbm4Q8C7Q4 361 aaKnown RBP6.85□□□□□ -1.31
Ccdc47-202ENSMUST00000106865 Snx8Q8CFD4 459 aa6.85□□□□□ -1.31
Ccdc47-202ENSMUST00000106865 Gprc6aQ8K4Z6 928 aa6.85□□□□□ -1.31
Ccdc47-202ENSMUST00000106865 Tspan33Q8R3S2 283 aa6.85□□□□□ -1.31
Ccdc47-202ENSMUST00000106865 Gtf2a1lQ8R4I4 468 aa6.85□□□□□ -1.31
Ccdc47-202ENSMUST00000106865 ClyblQ8R4N0 338 aa6.85□□□□□ -1.31
Ccdc47-202ENSMUST00000106865 Lsm1Q8VC85 133 aa6.85□□□□□ -1.31
Ccdc47-202ENSMUST00000106865 Rbm4bQ8VE92 357 aaKnown RBP6.85□□□□□ -1.31
Ccdc47-202ENSMUST00000106865 Epm2aip1Q8VEH5 606 aa6.85□□□□□ -1.31
Ccdc47-202ENSMUST00000106865 NifkQ91VE6 317 aaKnown RBP6.85□□□□□ -1.31
Ccdc47-202ENSMUST00000106865 Usb1Q91W78 267 aa6.85□□□□□ -1.31
Ccdc47-202ENSMUST00000106865 Ugt2b38Q91WH2 530 aa6.85□□□□□ -1.31
Ccdc47-202ENSMUST00000106865 Fads1Q920L1 447 aa6.85□□□□□ -1.31
Ccdc47-202ENSMUST00000106865 4930519G04RikQ9CPT7 205 aa6.85□□□□□ -1.31
Ccdc47-202ENSMUST00000106865 Prps2Q9CS42 318 aa6.85□□□□□ -1.31
Ccdc47-202ENSMUST00000106865 Pin4Q9CWW6 131 aa6.85□□□□□ -1.31
Ccdc47-202ENSMUST00000106865 Cep97Q9CZ62 856 aa6.85□□□□□ -1.31
Ccdc47-202ENSMUST00000106865 Tstd3Q9D0B5 157 aa6.85□□□□□ -1.31
Ccdc47-202ENSMUST00000106865 Ppil1Q9D0W5 166 aa6.85□□□□□ -1.31
Ccdc47-202ENSMUST00000106865 Clvs1Q9D4C9 354 aa6.85□□□□□ -1.31
Ccdc47-202ENSMUST00000106865 Haus5Q9D786 619 aa6.85□□□□□ -1.31
Ccdc47-202ENSMUST00000106865 Triap1Q9D8Z2 76 aa6.85□□□□□ -1.31
Ccdc47-202ENSMUST00000106865 H2bfmQ9DAB5 224 aa6.85□□□□□ -1.31
Ccdc47-202ENSMUST00000106865 Rcan2Q9JHG2 197 aa6.85□□□□□ -1.31
Ccdc47-202ENSMUST00000106865 Akip1Q9JJR5 212 aa6.85□□□□□ -1.31
Ccdc47-202ENSMUST00000106865 Pkp3Q9QY23 797 aa6.85□□□□□ -1.31
Ccdc47-202ENSMUST00000106865 Sgk2Q9QZS5 367 aa6.85□□□□□ -1.31
Ccdc47-202ENSMUST00000106865 Psma4Q9R1P0 261 aa6.85□□□□□ -1.31
Ccdc47-202ENSMUST00000106865 Fhl5Q9WTX7 284 aa6.85□□□□□ -1.31
Ccdc47-202ENSMUST00000106865 VapaQ9WV55 249 aaKnown RBP6.85□□□□□ -1.31
Ccdc47-202ENSMUST00000106865 Dio2Q9Z1Y9 266 aa6.85□□□□□ -1.31
Ccdc47-202ENSMUST00000106865 Rai1Q61818 1889 aa6.84□□□□□ -1.31
Ccdc47-202ENSMUST00000106865 Krtap28-13A0A087WQP5 138 aa6.84□□□□□ -1.31
Ccdc47-202ENSMUST00000106865 4921501E09RikA0A0R4J054 908 aa6.84□□□□□ -1.31
Ccdc47-202ENSMUST00000106865 Ccdc120A2AEV7 629 aa6.84□□□□□ -1.31
Ccdc47-202ENSMUST00000106865 Pnldc1B2RXZ1 531 aa6.84□□□□□ -1.31
Ccdc47-202ENSMUST00000106865 Cilp2D3Z7H8 1162 aa6.84□□□□□ -1.31
Ccdc47-202ENSMUST00000106865 Vmn2r90E9PXJ8 863 aa6.84□□□□□ -1.31
Ccdc47-202ENSMUST00000106865 Vmn1r31L7N2F1 303 aa6.84□□□□□ -1.31
Ccdc47-202ENSMUST00000106865 Nrp2O35375 931 aa6.84□□□□□ -1.31
Ccdc47-202ENSMUST00000106865 Stx7O70439 261 aa6.84□□□□□ -1.31
Ccdc47-202ENSMUST00000106865 Mybpc3O70468 1270 aaKnown RBP6.84□□□□□ -1.31
Ccdc47-202ENSMUST00000106865 Kcnk4O88454 398 aa6.84□□□□□ -1.31
Ccdc47-202ENSMUST00000106865 Hipk1O88904 1210 aa6.84□□□□□ -1.31
Ccdc47-202ENSMUST00000106865 Sp1O89090 784 aa6.84□□□□□ -1.31
Ccdc47-202ENSMUST00000106865 P06330 118 aa6.84□□□□□ -1.31
Ccdc47-202ENSMUST00000106865 Surf2P09926 257 aaKnown RBP6.84□□□□□ -1.31
Ccdc47-202ENSMUST00000106865 TyrP11344 533 aa6.84□□□□□ -1.31
Ccdc47-202ENSMUST00000106865 F3P20352 294 aa6.84□□□□□ -1.31
Ccdc47-202ENSMUST00000106865 Fcgr1P26151 404 aa6.84□□□□□ -1.31
Ccdc47-202ENSMUST00000106865 HalP35492 657 aa6.84□□□□□ -1.31
Ccdc47-202ENSMUST00000106865 ThrbP37242 461 aa6.84□□□□□ -1.31
Retrieved 100 of 22,080 RNA–protein pairs in 67.5 ms