Protein–RNA interactions for Protein: Q3U3V8

Xrra1, X-ray radiation resistance-associated protein 1, mousemouse

Predictions only

Length 786 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Xrra1Q3U3V8 Gm25239-201ENSMUST00000174915 86 ntBASIC35.04■■■■□ 3.2
Xrra1Q3U3V8 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC32.25■■■□□ 2.75
Xrra1Q3U3V8 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC31.92■■■□□ 2.7
Xrra1Q3U3V8 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC31.85■■■□□ 2.69
Xrra1Q3U3V8 Gm15042-201ENSMUST00000120212 883 ntBASIC30.94■■■□□ 2.54
Xrra1Q3U3V8 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC30.8■■■□□ 2.52
Xrra1Q3U3V8 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC30.72■■■□□ 2.51
Xrra1Q3U3V8 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC30.27■■■□□ 2.44
Xrra1Q3U3V8 Gm15045-201ENSMUST00000117359 883 ntBASIC30.26■■■□□ 2.43
Xrra1Q3U3V8 Gm24109-201ENSMUST00000175489 103 ntBASIC30.2■■■□□ 2.43
Xrra1Q3U3V8 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC29.94■■■□□ 2.38
Xrra1Q3U3V8 Psd-208ENSMUST00000224556 2034 ntBASIC29.81■■■□□ 2.36
Xrra1Q3U3V8 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC29.69■■■□□ 2.34
Xrra1Q3U3V8 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC29.57■■■□□ 2.32
Xrra1Q3U3V8 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC29.55■■■□□ 2.32
Xrra1Q3U3V8 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC29.44■■■□□ 2.3
Xrra1Q3U3V8 Gm23366-201ENSMUST00000175022 89 ntBASIC29.37■■■□□ 2.29
Xrra1Q3U3V8 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC29.18■■■□□ 2.26
Xrra1Q3U3V8 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC29.17■■■□□ 2.26
Xrra1Q3U3V8 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC29.01■■■□□ 2.23
Xrra1Q3U3V8 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC28.98■■■□□ 2.23
Xrra1Q3U3V8 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC28.87■■■□□ 2.21
Xrra1Q3U3V8 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC28.84■■■□□ 2.21
Xrra1Q3U3V8 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC28.76■■■□□ 2.19
Xrra1Q3U3V8 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC28.58■■■□□ 2.17
Xrra1Q3U3V8 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC28.58■■■□□ 2.16
Xrra1Q3U3V8 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC28.56■■■□□ 2.16
Xrra1Q3U3V8 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC28.54■■■□□ 2.16
Xrra1Q3U3V8 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC28.51■■■□□ 2.16
Xrra1Q3U3V8 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC28.5■■■□□ 2.15
Xrra1Q3U3V8 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC28.49■■■□□ 2.15
Xrra1Q3U3V8 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC28.45■■■□□ 2.14
Xrra1Q3U3V8 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
Xrra1Q3U3V8 AC153911.1-202ENSMUST00000218534 1034 ntBASIC28.37■■■□□ 2.13
Xrra1Q3U3V8 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC28.26■■■□□ 2.11
Xrra1Q3U3V8 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
Xrra1Q3U3V8 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC28.13■■■□□ 2.09
Xrra1Q3U3V8 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC27.97■■■□□ 2.07
Xrra1Q3U3V8 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC27.96■■■□□ 2.07
Xrra1Q3U3V8 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC27.95■■■□□ 2.06
Xrra1Q3U3V8 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC27.91■■■□□ 2.06
Xrra1Q3U3V8 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC27.87■■■□□ 2.05
Xrra1Q3U3V8 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC27.75■■■□□ 2.03
Xrra1Q3U3V8 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC27.75■■■□□ 2.03
Xrra1Q3U3V8 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC27.67■■■□□ 2.02
Xrra1Q3U3V8 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC27.66■■■□□ 2.02
Xrra1Q3U3V8 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC27.6■■■□□ 2.01
Xrra1Q3U3V8 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC27.59■■■□□ 2.01
Xrra1Q3U3V8 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC27.55■■■□□ 2
Xrra1Q3U3V8 Gm25238-201ENSMUST00000174914 89 ntBASIC27.53■■■□□ 2
Xrra1Q3U3V8 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC27.48■■□□□ 1.99
Xrra1Q3U3V8 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC27.47■■□□□ 1.99
Xrra1Q3U3V8 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC27.46■■□□□ 1.99
Xrra1Q3U3V8 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC27.45■■□□□ 1.99
Xrra1Q3U3V8 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
Xrra1Q3U3V8 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
Xrra1Q3U3V8 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC27.26■■□□□ 1.95
Xrra1Q3U3V8 Gm42596-201ENSMUST00000196305 1958 ntBASIC27.19■■□□□ 1.94
Xrra1Q3U3V8 Gm27325-201ENSMUST00000175467 74 ntBASIC27.17■■□□□ 1.94
Xrra1Q3U3V8 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC27.15■■□□□ 1.94
Xrra1Q3U3V8 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.94
Xrra1Q3U3V8 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC27.14■■□□□ 1.94
Xrra1Q3U3V8 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC27.13■■□□□ 1.93
Xrra1Q3U3V8 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC27.13■■□□□ 1.93
Xrra1Q3U3V8 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
Xrra1Q3U3V8 Gm10524-201ENSMUST00000181931 1893 ntBASIC27.08■■□□□ 1.93
Xrra1Q3U3V8 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC27.08■■□□□ 1.93
Xrra1Q3U3V8 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
Xrra1Q3U3V8 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC26.97■■□□□ 1.91
Xrra1Q3U3V8 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.9
Xrra1Q3U3V8 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
Xrra1Q3U3V8 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC26.87■■□□□ 1.89
Xrra1Q3U3V8 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
Xrra1Q3U3V8 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC26.87■■□□□ 1.89
Xrra1Q3U3V8 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC26.86■■□□□ 1.89
Xrra1Q3U3V8 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC26.86■■□□□ 1.89
Xrra1Q3U3V8 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
Xrra1Q3U3V8 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC26.81■■□□□ 1.88
Xrra1Q3U3V8 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC26.81■■□□□ 1.88
Xrra1Q3U3V8 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
Xrra1Q3U3V8 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC26.8■■□□□ 1.88
Xrra1Q3U3V8 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
Xrra1Q3U3V8 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC26.72■■□□□ 1.87
Xrra1Q3U3V8 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC26.68■■□□□ 1.86
Xrra1Q3U3V8 CT025624.2-201ENSMUST00000223609 1909 ntBASIC26.66■■□□□ 1.86
Xrra1Q3U3V8 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
Xrra1Q3U3V8 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
Xrra1Q3U3V8 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC26.53■■□□□ 1.84
Xrra1Q3U3V8 Rab21-202ENSMUST00000218831 843 ntBASIC26.51■■□□□ 1.83
Xrra1Q3U3V8 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC26.49■■□□□ 1.83
Xrra1Q3U3V8 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
Xrra1Q3U3V8 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
Xrra1Q3U3V8 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC26.44■■□□□ 1.82
Xrra1Q3U3V8 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC26.42■■□□□ 1.82
Xrra1Q3U3V8 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
Xrra1Q3U3V8 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC26.39■■□□□ 1.82
Xrra1Q3U3V8 Gm25262-201ENSMUST00000174934 133 ntBASIC26.31■■□□□ 1.8
Xrra1Q3U3V8 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
Xrra1Q3U3V8 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
Xrra1Q3U3V8 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
Retrieved 100 of 76,532 protein–RNA pairs in 15.8 ms