RNA–Protein interactions for RNA: ENST00000588408.5

CNTD1-204, Transcript of cyclin N-terminal domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNTD1, Length 2,369 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTD1-204ENST00000588408 NIPSNAP1Q9BPW8 284 aa13.22□□□□□ -0.29
CNTD1-204ENST00000588408 MS4A8Q9BY19 250 aa13.22□□□□□ -0.29
CNTD1-204ENST00000588408 RHCGQ9UBD6 479 aa13.22□□□□□ -0.29
CNTD1-204ENST00000588408 KCNK6Q9Y257 313 aa13.22□□□□□ -0.29
CNTD1-204ENST00000588408 SH3GLB1Q9Y371 365 aa13.22□□□□□ -0.29
CNTD1-204ENST00000588408 MDC1Q14676 2089 aaKnown RBP13.21□□□□□ -0.29
CNTD1-204ENST00000588408 ANKDD1BA6NHY2 528 aa13.21□□□□□ -0.29
CNTD1-204ENST00000588408 TMPRSS11DO60235 418 aa13.21□□□□□ -0.29
CNTD1-204ENST00000588408 BCAS1O75363 584 aaPredicted RBP13.21□□□□□ -0.29
CNTD1-204ENST00000588408 FADS2O95864 444 aaKnown RBP13.21□□□□□ -0.29
CNTD1-204ENST00000588408 MT-ND2P03891 347 aa13.21□□□□□ -0.29
CNTD1-204ENST00000588408 ALDH4A1P30038 563 aa13.21□□□□□ -0.29
CNTD1-204ENST00000588408 DGKEP52429 567 aa13.21□□□□□ -0.29
CNTD1-204ENST00000588408 SPIBQ01892 262 aa13.21□□□□□ -0.29
CNTD1-204ENST00000588408 FCHO2Q0JRZ9 810 aa13.21□□□□□ -0.29
CNTD1-204ENST00000588408 TOP3AQ13472 1001 aaPredicted RBP13.21□□□□□ -0.29
CNTD1-204ENST00000588408 GANABQ14697 944 aaKnown RBP13.21□□□□□ -0.29
CNTD1-204ENST00000588408 TEAD4Q15561 434 aa13.21□□□□□ -0.29
CNTD1-204ENST00000588408 CYP2A13Q16696 494 aa13.21□□□□□ -0.29
CNTD1-204ENST00000588408 EXOC3L2Q2M3D2 409 aa13.21□□□□□ -0.29
CNTD1-204ENST00000588408 DEPDC1Q5TB30 811 aa13.21□□□□□ -0.29
CNTD1-204ENST00000588408 KIAA1211LQ6NV74 962 aa13.21□□□□□ -0.29
CNTD1-204ENST00000588408 TNFAIP8L2Q6P589 184 aaPredicted RBP13.21□□□□□ -0.29
CNTD1-204ENST00000588408 SLC44A2Q8IWA5 706 aaPredicted RBP13.21□□□□□ -0.29
CNTD1-204ENST00000588408 ENTHD1Q8IYW4 607 aa13.21□□□□□ -0.29
CNTD1-204ENST00000588408 KRT78Q8N1N4 520 aa13.21□□□□□ -0.29
CNTD1-204ENST00000588408 OR9Q2Q8NGE9 314 aa13.21□□□□□ -0.29
CNTD1-204ENST00000588408 NRBF2Q96F24 287 aa13.21□□□□□ -0.29
CNTD1-204ENST00000588408 AICDAQ9GZX7 198 aa13.21□□□□□ -0.29
CNTD1-204ENST00000588408 DUSP21Q9H596 190 aa13.21□□□□□ -0.29
CNTD1-204ENST00000588408 PREBQ9HCU5 417 aa13.21□□□□□ -0.29
CNTD1-204ENST00000588408 AMBNQ9NP70 447 aa13.21□□□□□ -0.29
CNTD1-204ENST00000588408 FZD3Q9NPG1 666 aa13.21□□□□□ -0.29
CNTD1-204ENST00000588408 TEX10Q9NXF1 929 aaPredicted RBP13.21□□□□□ -0.29
CNTD1-204ENST00000588408 TMEM9Q9P0T7 183 aa13.21□□□□□ -0.29
CNTD1-204ENST00000588408 RAB23Q9ULC3 237 aa13.21□□□□□ -0.29
CNTD1-204ENST00000588408 SLC6A14Q9UN76 642 aa13.21□□□□□ -0.29
CNTD1-204ENST00000588408 MAPRE3Q9UPY8 281 aa13.21□□□□□ -0.29
CNTD1-204ENST00000588408 PCDHGA6Q9Y5G7 932 aa13.21□□□□□ -0.29
CNTD1-204ENST00000588408 IGKV1-8A0A0C4DH67 115 aa13.21□□□□□ -0.3
CNTD1-204ENST00000588408 FAM227AF5H4B4 570 aa13.21□□□□□ -0.3
CNTD1-204ENST00000588408 PCDH17O14917 1159 aa13.21□□□□□ -0.3
CNTD1-204ENST00000588408 NOL3O60936 208 aaKnown RBP13.21□□□□□ -0.3
CNTD1-204ENST00000588408 PRKRAO75569 313 aaKnown RBP13.21□□□□□ -0.3
CNTD1-204ENST00000588408 POU2F1P14859 743 aa13.21□□□□□ -0.3
CNTD1-204ENST00000588408 ITIH1P19827 911 aa13.21□□□□□ -0.3
CNTD1-204ENST00000588408 MAPK12P53778 367 aa13.21□□□□□ -0.3
CNTD1-204ENST00000588408 LSM3P62310 102 aaKnown RBP13.21□□□□□ -0.3
CNTD1-204ENST00000588408 HSPB3Q12988 150 aa13.21□□□□□ -0.3
CNTD1-204ENST00000588408 TUBA3CQ13748 450 aa13.21□□□□□ -0.3
CNTD1-204ENST00000588408 DUSP7Q16829 419 aa13.21□□□□□ -0.3
CNTD1-204ENST00000588408 OXR1Q8N573 874 aa13.21□□□□□ -0.3
CNTD1-204ENST00000588408 HORMAD2Q8N7B1 307 aa13.21□□□□□ -0.3
CNTD1-204ENST00000588408 ZNF540Q8NDQ6 660 aa13.21□□□□□ -0.3
CNTD1-204ENST00000588408 SETD9Q8NE22 299 aa13.21□□□□□ -0.3
CNTD1-204ENST00000588408 OR4C15Q8NGM1 316 aa13.21□□□□□ -0.3
CNTD1-204ENST00000588408 DNASE1L2Q92874 299 aa13.21□□□□□ -0.3
CNTD1-204ENST00000588408 FGF14Q92915 247 aa13.21□□□□□ -0.3
CNTD1-204ENST00000588408 RAB8BQ92930 207 aa13.21□□□□□ -0.3
CNTD1-204ENST00000588408 RAB7BQ96AH8 199 aa13.21□□□□□ -0.3
CNTD1-204ENST00000588408 FERD3LQ96RJ6 166 aa13.21□□□□□ -0.3
CNTD1-204ENST00000588408 SLX1AQ9BQ83 275 aa13.21□□□□□ -0.3
CNTD1-204ENST00000588408 PBX4Q9BYU1 374 aa13.21□□□□□ -0.3
CNTD1-204ENST00000588408 EPS8L2Q9H6S3 715 aa13.21□□□□□ -0.3
CNTD1-204ENST00000588408 PRDM8Q9NQV8 689 aa13.21□□□□□ -0.3
CNTD1-204ENST00000588408 PCDHGB3Q9Y5G1 929 aa13.21□□□□□ -0.3
CNTD1-204ENST00000588408 OR52A4PA6NMU1 304 aa13.2□□□□□ -0.3
CNTD1-204ENST00000588408 ZNF99A8MXY4 864 aaPredicted RBP13.2□□□□□ -0.3
CNTD1-204ENST00000588408 E9PQ18 207 aa13.2□□□□□ -0.3
CNTD1-204ENST00000588408 OR1F1O43749 312 aa13.2□□□□□ -0.3
CNTD1-204ENST00000588408 FAM20BO75063 409 aa13.2□□□□□ -0.3
CNTD1-204ENST00000588408 NDUFS2O75306 463 aa13.2□□□□□ -0.3
CNTD1-204ENST00000588408 SERPIND1P05546 499 aa13.2□□□□□ -0.3
CNTD1-204ENST00000588408 INHBBP09529 407 aa13.2□□□□□ -0.3
CNTD1-204ENST00000588408 JUNDP17535 347 aa13.2□□□□□ -0.3
CNTD1-204ENST00000588408 TIE1P35590 1138 aa13.2□□□□□ -0.3
CNTD1-204ENST00000588408 ERVK-21P61565 698 aa13.2□□□□□ -0.3
CNTD1-204ENST00000588408 MVKQ03426 396 aa13.2□□□□□ -0.3
CNTD1-204ENST00000588408 RPA4Q13156 261 aa13.2□□□□□ -0.3
CNTD1-204ENST00000588408 DGCR6Q14129 220 aa13.2□□□□□ -0.3
CNTD1-204ENST00000588408 CTF1Q16619 201 aa13.2□□□□□ -0.3
CNTD1-204ENST00000588408 IFI44LQ53G44 452 aa13.2□□□□□ -0.3
CNTD1-204ENST00000588408 PARM1Q6UWI2 310 aa13.2□□□□□ -0.3
CNTD1-204ENST00000588408 OLIG3Q7RTU3 272 aa13.2□□□□□ -0.3
CNTD1-204ENST00000588408 UBE3DQ7Z6J8 389 aa13.2□□□□□ -0.3
CNTD1-204ENST00000588408 NLGN4XQ8N0W4 816 aa13.2□□□□□ -0.3
CNTD1-204ENST00000588408 GIPC3Q8TF64 312 aa13.2□□□□□ -0.3
CNTD1-204ENST00000588408 RAB2BQ8WUD1 216 aa13.2□□□□□ -0.3
CNTD1-204ENST00000588408 JPH3Q8WXH2 748 aaPredicted RBP13.2□□□□□ -0.3
CNTD1-204ENST00000588408 EXOSC8Q96B26 276 aaKnown RBP13.2□□□□□ -0.3
CNTD1-204ENST00000588408 C12orf66Q96MD2 445 aa13.2□□□□□ -0.3
CNTD1-204ENST00000588408 ZNF300Q96RE9 604 aaPredicted RBP13.2□□□□□ -0.3
CNTD1-204ENST00000588408 MYADMQ96S97 322 aa13.2□□□□□ -0.3
CNTD1-204ENST00000588408 TEX101Q9BY14 249 aa13.2□□□□□ -0.3
CNTD1-204ENST00000588408 RHBGQ9H310 441 aa13.2□□□□□ -0.3
CNTD1-204ENST00000588408 PSME2Q9UL46 239 aa13.2□□□□□ -0.3
CNTD1-204ENST00000588408 RNF6Q9Y252 685 aa13.2□□□□□ -0.3
CNTD1-204ENST00000588408 SCN3AQ9NY46 2000 aa13.2□□□□□ -0.3
CNTD1-204ENST00000588408 SLC35G4P0C7Q5 338 aa13.2□□□□□ -0.3
CNTD1-204ENST00000588408 MAT2AP31153 395 aaKnown RBP13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms