RNA–Protein interactions for RNA: ENST00000538548.5

SFSWAP-207, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 2,636 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-207ENST00000538548 STOML2Q9UJZ1 356 aa17.8■□□□□ 0.44
SFSWAP-207ENST00000538548 RPL36Q9Y3U8 105 aaKnown RBP17.8■□□□□ 0.44
SFSWAP-207ENST00000538548 PCDHGB7Q9Y5F8 929 aa17.8■□□□□ 0.44
SFSWAP-207ENST00000538548 AUP1Q9Y679 476 aa17.8■□□□□ 0.44
SFSWAP-207ENST00000538548 ZFP37Q9Y6Q3 630 aaPredicted RBP17.8■□□□□ 0.44
SFSWAP-207ENST00000538548 DSPPQ9NZW4 1301 aa17.79■□□□□ 0.44
SFSWAP-207ENST00000538548 CBX4O00257 560 aa17.79■□□□□ 0.44
SFSWAP-207ENST00000538548 LYRM1O43325 122 aa17.79■□□□□ 0.44
SFSWAP-207ENST00000538548 GASTP01350 101 aa17.79■□□□□ 0.44
SFSWAP-207ENST00000538548 C1SP09871 688 aa17.79■□□□□ 0.44
SFSWAP-207ENST00000538548 ATF6P18850 670 aa17.79■□□□□ 0.44
SFSWAP-207ENST00000538548 ITGALP20701 1170 aa17.79■□□□□ 0.44
SFSWAP-207ENST00000538548 APEX1P27695 318 aaKnown RBP17.79■□□□□ 0.44
SFSWAP-207ENST00000538548 SLC6A4P31645 630 aa17.79■□□□□ 0.44
SFSWAP-207ENST00000538548 ZXDCQ2QGD7 858 aaPredicted RBP17.79■□□□□ 0.44
SFSWAP-207ENST00000538548 CPTPQ5TA50 214 aa17.79■□□□□ 0.44
SFSWAP-207ENST00000538548 C22orf42Q6IC83 251 aa17.79■□□□□ 0.44
SFSWAP-207ENST00000538548 TLK2Q86UE8 772 aa17.79■□□□□ 0.44
SFSWAP-207ENST00000538548 NPAS3Q8IXF0 933 aa17.79■□□□□ 0.44
SFSWAP-207ENST00000538548 ESX1Q8N693 406 aa17.79■□□□□ 0.44
SFSWAP-207ENST00000538548 NELL2Q99435 816 aa17.79■□□□□ 0.44
SFSWAP-207ENST00000538548 RETREG1Q9H6L5 497 aa17.79■□□□□ 0.44
SFSWAP-207ENST00000538548 C11orf16Q9NQ32 467 aa17.79■□□□□ 0.44
SFSWAP-207ENST00000538548 PCDHB8Q9UN66 801 aa17.79■□□□□ 0.44
SFSWAP-207ENST00000538548 PCDHB9Q9Y5E1 797 aa17.79■□□□□ 0.44
SFSWAP-207ENST00000538548 TDRD15B5MCY1 1934 aaKnown RBP17.79■□□□□ 0.44
SFSWAP-207ENST00000538548 H3BNC9 293 aa17.79■□□□□ 0.44
SFSWAP-207ENST00000538548 SLC22A5O76082 557 aa17.79■□□□□ 0.44
SFSWAP-207ENST00000538548 ACRV1P26436 265 aa17.79■□□□□ 0.44
SFSWAP-207ENST00000538548 SDC2P34741 201 aa17.79■□□□□ 0.44
SFSWAP-207ENST00000538548 CRATP43155 626 aa17.79■□□□□ 0.44
SFSWAP-207ENST00000538548 TJAP1Q5JTD0 557 aa17.79■□□□□ 0.44
SFSWAP-207ENST00000538548 NCEH1Q6PIU2 408 aa17.79■□□□□ 0.44
SFSWAP-207ENST00000538548 RNF175Q8N4F7 328 aa17.79■□□□□ 0.44
SFSWAP-207ENST00000538548 CCDC120Q96HB5 630 aa17.79■□□□□ 0.44
SFSWAP-207ENST00000538548 KCTD7Q96MP8 289 aa17.79■□□□□ 0.44
SFSWAP-207ENST00000538548 UROC1Q96N76 676 aa17.79■□□□□ 0.44
SFSWAP-207ENST00000538548 NMNAT1Q9HAN9 279 aaPredicted RBP17.79■□□□□ 0.44
SFSWAP-207ENST00000538548 DNAJC27Q9NZQ0 273 aa17.79■□□□□ 0.44
SFSWAP-207ENST00000538548 ZNF282Q9UDV7 671 aaPredicted RBP17.79■□□□□ 0.44
SFSWAP-207ENST00000538548 RUVBL1Q9Y265 456 aaKnown RBP17.79■□□□□ 0.44
SFSWAP-207ENST00000538548 TNFRSF21O75509 655 aa17.78■□□□□ 0.44
SFSWAP-207ENST00000538548 PPP3R1P63098 170 aa17.78■□□□□ 0.44
SFSWAP-207ENST00000538548 ANXA8L1Q5VT79 327 aa17.78■□□□□ 0.44
SFSWAP-207ENST00000538548 AKAP1Q92667 903 aaKnown RBP eCLIP17.78■□□□□ 0.44
SFSWAP-207ENST00000538548 MAGEB10Q96LZ2 347 aaPredicted RBP17.78■□□□□ 0.44
SFSWAP-207ENST00000538548 PPP1R3EQ9H7J1 279 aa17.78■□□□□ 0.44
SFSWAP-207ENST00000538548 VPS29Q9UBQ0 182 aa17.78■□□□□ 0.44
SFSWAP-207ENST00000538548 OR7A10O76100 309 aa17.78■□□□□ 0.44
SFSWAP-207ENST00000538548 CBSLP0DN79 551 aa17.78■□□□□ 0.44
SFSWAP-207ENST00000538548 CTRB1P17538 263 aa17.78■□□□□ 0.44
SFSWAP-207ENST00000538548 EVI2BP34910 448 aa17.78■□□□□ 0.44
SFSWAP-207ENST00000538548 PTGS2P35354 604 aa17.78■□□□□ 0.44
SFSWAP-207ENST00000538548 CBSP35520 551 aa17.78■□□□□ 0.44
SFSWAP-207ENST00000538548 SLC6A12P48065 614 aa17.78■□□□□ 0.44
SFSWAP-207ENST00000538548 ABATP80404 500 aa17.78■□□□□ 0.44
SFSWAP-207ENST00000538548 ZNF91Q05481 1191 aa17.78■□□□□ 0.44
SFSWAP-207ENST00000538548 MADCAM1Q13477 382 aa17.78■□□□□ 0.44
SFSWAP-207ENST00000538548 CTRB2Q6GPI1 263 aa17.78■□□□□ 0.44
SFSWAP-207ENST00000538548 SOSTQ9BQB4 213 aa17.78■□□□□ 0.44
SFSWAP-207ENST00000538548 NDOR1Q9UHB4 597 aa17.78■□□□□ 0.44
SFSWAP-207ENST00000538548 ELF5Q9UKW6 265 aaPredicted RBP17.78■□□□□ 0.44
SFSWAP-207ENST00000538548 TRPV2Q9Y5S1 764 aa17.78■□□□□ 0.44
SFSWAP-207ENST00000538548 TRBV5-4A0A0C4DH59 114 aa17.77■□□□□ 0.44
SFSWAP-207ENST00000538548 GABRR3A8MPY1 467 aa17.77■□□□□ 0.44
SFSWAP-207ENST00000538548 PRAMEF4O60810 478 aa17.77■□□□□ 0.44
SFSWAP-207ENST00000538548 AOAHP28039 575 aa17.77■□□□□ 0.44
SFSWAP-207ENST00000538548 HOXC8P31273 242 aa17.77■□□□□ 0.44
SFSWAP-207ENST00000538548 MVDP53602 400 aa17.77■□□□□ 0.44
SFSWAP-207ENST00000538548 RPS24P62847 133 aaKnown RBP17.77■□□□□ 0.44
SFSWAP-207ENST00000538548 TAF10Q12962 218 aa17.77■□□□□ 0.44
SFSWAP-207ENST00000538548 SCARB2Q14108 478 aa17.77■□□□□ 0.44
SFSWAP-207ENST00000538548 GANABQ14697 944 aaKnown RBP17.77■□□□□ 0.44
SFSWAP-207ENST00000538548 TAF1CQ15572 869 aaPredicted RBP17.77■□□□□ 0.44
SFSWAP-207ENST00000538548 PRAMEF9Q5VWM5 478 aa17.77■□□□□ 0.44
SFSWAP-207ENST00000538548 ZNF770Q6IQ21 691 aaPredicted RBP17.77■□□□□ 0.44
SFSWAP-207ENST00000538548 ANGPTL8Q6UXH0 198 aa17.77■□□□□ 0.44
SFSWAP-207ENST00000538548 ZNF730Q6ZMV8 503 aa17.77■□□□□ 0.44
SFSWAP-207ENST00000538548 GPR65Q8IYL9 337 aa17.77■□□□□ 0.44
SFSWAP-207ENST00000538548 IL17RCQ8NAC3 791 aa17.77■□□□□ 0.44
SFSWAP-207ENST00000538548 KATNB1Q9BVA0 655 aa17.77■□□□□ 0.44
SFSWAP-207ENST00000538548 C1QTNF7Q9BXJ2 289 aa17.77■□□□□ 0.44
SFSWAP-207ENST00000538548 KCTD5Q9NXV2 234 aa17.77■□□□□ 0.44
SFSWAP-207ENST00000538548 AFF4Q9UHB7 1163 aaKnown RBP17.77■□□□□ 0.44
SFSWAP-207ENST00000538548 ITM2BQ9Y287 266 aa17.77■□□□□ 0.44
SFSWAP-207ENST00000538548 FZD6O60353 706 aa17.77■□□□□ 0.43
SFSWAP-207ENST00000538548 RFPL3O75679 317 aa17.77■□□□□ 0.43
SFSWAP-207ENST00000538548 ETFAP13804 333 aa17.77■□□□□ 0.43
SFSWAP-207ENST00000538548 JUPP14923 745 aa17.77■□□□□ 0.43
SFSWAP-207ENST00000538548 CPEP16870 476 aa17.77■□□□□ 0.43
SFSWAP-207ENST00000538548 PER3P56645 1201 aa17.77■□□□□ 0.43
SFSWAP-207ENST00000538548 ACSM2AQ08AH3 577 aa17.77■□□□□ 0.43
SFSWAP-207ENST00000538548 RBBP4Q09028 425 aa17.77■□□□□ 0.43
SFSWAP-207ENST00000538548 IKZF1Q13422 519 aa17.77■□□□□ 0.43
SFSWAP-207ENST00000538548 GCNT6Q5T4J0 391 aa17.77■□□□□ 0.43
SFSWAP-207ENST00000538548 LYPLAL1Q5VWZ2 237 aa17.77■□□□□ 0.43
SFSWAP-207ENST00000538548 ACSM2BQ68CK6 577 aa17.77■□□□□ 0.43
SFSWAP-207ENST00000538548 METAP1DQ6UB28 335 aaPredicted RBP17.77■□□□□ 0.43
SFSWAP-207ENST00000538548 USP30Q70CQ3 517 aa17.77■□□□□ 0.43
SFSWAP-207ENST00000538548 PDZD3Q86UT5 571 aa17.77■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms