RNA–Protein interactions for RNA: ENST00000448404.5

SF1-211, Transcript of splicing factor 1, humanhuman

TSL 1 (best)

Gene SF1, Length 2,778 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-211ENST00000448404 MAGIXQ9H6Y5 334 aa14.14□□□□□ -0.15
SF1-211ENST00000448404 REEP1Q9H902 201 aa14.14□□□□□ -0.15
SF1-211ENST00000448404 TUBA8Q9NY65 449 aaPredicted RBP14.14□□□□□ -0.15
SF1-211ENST00000448404 USE1Q9NZ43 259 aa14.14□□□□□ -0.15
SF1-211ENST00000448404 CARNS1A5YM72 827 aa14.14□□□□□ -0.15
SF1-211ENST00000448404 PCDHGA12O60330 932 aa14.14□□□□□ -0.15
SF1-211ENST00000448404 HPRP00739 348 aa14.14□□□□□ -0.15
SF1-211ENST00000448404 SEMG1P04279 462 aa14.14□□□□□ -0.15
SF1-211ENST00000448404 SCARB2Q14108 478 aa14.14□□□□□ -0.15
SF1-211ENST00000448404 MLF2Q15773 248 aaPredicted RBP14.14□□□□□ -0.15
SF1-211ENST00000448404 KDM4DQ6B0I6 523 aa14.14□□□□□ -0.15
SF1-211ENST00000448404 RD3Q7Z3Z2 195 aa14.14□□□□□ -0.15
SF1-211ENST00000448404 BTLAQ7Z6A9 289 aa14.14□□□□□ -0.15
SF1-211ENST00000448404 MEX3DQ86XN8 651 aaKnown RBP14.14□□□□□ -0.15
SF1-211ENST00000448404 HIPK1Q86Z02 1210 aa14.14□□□□□ -0.15
SF1-211ENST00000448404 RBM45Q8IUH3 476 aaKnown RBP14.14□□□□□ -0.15
SF1-211ENST00000448404 SLC5A8Q8N695 610 aa14.14□□□□□ -0.15
SF1-211ENST00000448404 LEMD2Q8NC56 503 aa14.14□□□□□ -0.15
SF1-211ENST00000448404 VPS37AQ8NEZ2 397 aa14.14□□□□□ -0.15
SF1-211ENST00000448404 RPL3LQ92901 407 aaKnown RBP14.14□□□□□ -0.15
SF1-211ENST00000448404 GTPBP3Q969Y2 492 aaKnown RBP14.14□□□□□ -0.15
SF1-211ENST00000448404 ZCCHC2Q9C0B9 1178 aaKnown RBP14.14□□□□□ -0.15
SF1-211ENST00000448404 CTPS2Q9NRF8 586 aa14.14□□□□□ -0.15
SF1-211ENST00000448404 ZFR2Q9UPR6 939 aaKnown RBP14.14□□□□□ -0.15
SF1-211ENST00000448404 ORC6Q9Y5N6 252 aa14.14□□□□□ -0.15
SF1-211ENST00000448404 CXorf51AA0A1B0GTR3 108 aa14.13□□□□□ -0.15
SF1-211ENST00000448404 A0A1W2PRB8 838 aa14.13□□□□□ -0.15
SF1-211ENST00000448404 PCDH17O14917 1159 aa14.13□□□□□ -0.15
SF1-211ENST00000448404 OR1F1O43749 312 aa14.13□□□□□ -0.15
SF1-211ENST00000448404 TMPRSS11DO60235 418 aa14.13□□□□□ -0.15
SF1-211ENST00000448404 IGFBP1P08833 259 aaPredicted RBP14.13□□□□□ -0.15
SF1-211ENST00000448404 DCKP27707 260 aa14.13□□□□□ -0.15
SF1-211ENST00000448404 RPP38P78345 283 aaKnown RBP14.13□□□□□ -0.15
SF1-211ENST00000448404 IRF4Q15306 451 aa14.13□□□□□ -0.15
SF1-211ENST00000448404 FAM71E1Q6IPT2 247 aa14.13□□□□□ -0.15
SF1-211ENST00000448404 AHSA2Q719I0 299 aa14.13□□□□□ -0.15
SF1-211ENST00000448404 C12orf66Q96MD2 445 aa14.13□□□□□ -0.15
SF1-211ENST00000448404 NODALQ96S42 347 aa14.13□□□□□ -0.15
SF1-211ENST00000448404 KLHL31Q9H511 634 aa14.13□□□□□ -0.15
SF1-211ENST00000448404 TM9SF3Q9HD45 589 aa14.13□□□□□ -0.15
SF1-211ENST00000448404 CORINQ9Y5Q5 1042 aa14.13□□□□□ -0.15
SF1-211ENST00000448404 ALPK3Q96L96 1907 aa14.13□□□□□ -0.15
SF1-211ENST00000448404 C4orf51C9J302 202 aa14.13□□□□□ -0.15
SF1-211ENST00000448404 H0Y8X5 98 aa14.13□□□□□ -0.15
SF1-211ENST00000448404 PSMD11O00231 422 aa14.13□□□□□ -0.15
SF1-211ENST00000448404 MT-ND2P03891 347 aa14.13□□□□□ -0.15
SF1-211ENST00000448404 ATXN8OSP0DMR3 200 aa14.13□□□□□ -0.15
SF1-211ENST00000448404 DNAJA1P31689 397 aaKnown RBP14.13□□□□□ -0.15
SF1-211ENST00000448404 ASMTP46597 345 aa14.13□□□□□ -0.15
SF1-211ENST00000448404 RXRGP48443 463 aa14.13□□□□□ -0.15
SF1-211ENST00000448404 IDH2P48735 452 aaKnown RBP14.13□□□□□ -0.15
SF1-211ENST00000448404 RAD23AP54725 363 aa14.13□□□□□ -0.15
SF1-211ENST00000448404 CLDN2P57739 230 aa14.13□□□□□ -0.15
SF1-211ENST00000448404 LSM11P83369 360 aaKnown RBP eCLIP14.13□□□□□ -0.15
SF1-211ENST00000448404 NFATC3Q12968 1075 aa14.13□□□□□ -0.15
SF1-211ENST00000448404 PDGFRLQ15198 375 aa14.13□□□□□ -0.15
SF1-211ENST00000448404 GTF2IRD2BQ6EKJ0 949 aa14.13□□□□□ -0.15
SF1-211ENST00000448404 GTF2IRD2Q86UP8 949 aa14.13□□□□□ -0.15
SF1-211ENST00000448404 PDZD3Q86UT5 571 aa14.13□□□□□ -0.15
SF1-211ENST00000448404 LAS2Q8IYD9 372 aa14.13□□□□□ -0.15
SF1-211ENST00000448404 C11orf65Q8NCR3 313 aa14.13□□□□□ -0.15
SF1-211ENST00000448404 HDAC2Q92769 488 aaKnown RBP14.13□□□□□ -0.15
SF1-211ENST00000448404 FERD3LQ96RJ6 166 aa14.13□□□□□ -0.15
SF1-211ENST00000448404 INSM2Q96T92 566 aaPredicted RBP14.13□□□□□ -0.15
SF1-211ENST00000448404 C17orf62Q9BQA9 187 aa14.13□□□□□ -0.15
SF1-211ENST00000448404 EFCAB11Q9BUY7 163 aa14.13□□□□□ -0.15
SF1-211ENST00000448404 ZNF717Q9BY31 904 aaPredicted RBP14.13□□□□□ -0.15
SF1-211ENST00000448404 PLGRKTQ9HBL7 147 aa14.13□□□□□ -0.15
SF1-211ENST00000448404 LHX9Q9NQ69 397 aa14.13□□□□□ -0.15
SF1-211ENST00000448404 RAD18Q9NS91 495 aa14.13□□□□□ -0.15
SF1-211ENST00000448404 TBCCD1Q9NVR7 557 aa14.13□□□□□ -0.15
SF1-211ENST00000448404 TAS2R16Q9NYV7 291 aa14.13□□□□□ -0.15
SF1-211ENST00000448404 TPST2O60704 377 aa14.12□□□□□ -0.15
SF1-211ENST00000448404 TNFRSF21O75509 655 aa14.12□□□□□ -0.15
SF1-211ENST00000448404 CPNE6O95741 557 aa14.12□□□□□ -0.15
SF1-211ENST00000448404 LCKP06239 509 aa14.12□□□□□ -0.15
SF1-211ENST00000448404 C8orf89P0DMQ9 161 aa14.12□□□□□ -0.15
SF1-211ENST00000448404 ZNF24P17028 368 aa14.12□□□□□ -0.15
SF1-211ENST00000448404 C21orf33P30042 268 aaPredicted RBP14.12□□□□□ -0.15
SF1-211ENST00000448404 HOXD12P35452 270 aa14.12□□□□□ -0.15
SF1-211ENST00000448404 KRT20P35900 424 aa14.12□□□□□ -0.15
SF1-211ENST00000448404 SPIBQ01892 262 aa14.12□□□□□ -0.15
SF1-211ENST00000448404 DLX2Q07687 328 aaPredicted RBP14.12□□□□□ -0.15
SF1-211ENST00000448404 NPTX1Q15818 432 aa14.12□□□□□ -0.15
SF1-211ENST00000448404 CST6Q15828 149 aa14.12□□□□□ -0.15
SF1-211ENST00000448404 HIST2H2ACQ16777 129 aaPredicted RBP14.12□□□□□ -0.15
SF1-211ENST00000448404 LEXMQ3ZCV2 418 aa14.12□□□□□ -0.15
SF1-211ENST00000448404 HIST2H2AA3Q6FI13 130 aa14.12□□□□□ -0.15
SF1-211ENST00000448404 FAM129CQ86XR2 697 aa14.12□□□□□ -0.15
SF1-211ENST00000448404 GALNT13Q8IUC8 556 aa14.12□□□□□ -0.15
SF1-211ENST00000448404 FAM9CQ8IZT9 166 aa14.12□□□□□ -0.15
SF1-211ENST00000448404 OR52E4Q8NGH9 312 aa14.12□□□□□ -0.15
SF1-211ENST00000448404 OR5D16Q8NGK9 328 aa14.12□□□□□ -0.15
SF1-211ENST00000448404 OR14C36Q8NHC7 312 aa14.12□□□□□ -0.15
SF1-211ENST00000448404 PROX1Q92786 737 aa14.12□□□□□ -0.15
SF1-211ENST00000448404 RAD51AP1Q96B01 352 aa14.12□□□□□ -0.15
SF1-211ENST00000448404 PPP1R16AQ96I34 528 aa14.12□□□□□ -0.15
SF1-211ENST00000448404 ASPSCR1Q9BZE9 553 aa14.12□□□□□ -0.15
SF1-211ENST00000448404 AICDAQ9GZX7 198 aa14.12□□□□□ -0.15
SF1-211ENST00000448404 IGKV1-8A0A0C4DH67 115 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms