RNA–Protein interactions for RNA: ENST00000397827.7

CHRFAM7A-202, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

TSL 5 BASIC

Gene CHRFAM7A, Length 2,794 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-202ENST00000397827 C16orf78Q8WTQ4 265 aa17.57■□□□□ 0.4
CHRFAM7A-202ENST00000397827 NACC2Q96BF6 587 aa17.57■□□□□ 0.4
CHRFAM7A-202ENST00000397827 PPCDCQ96CD2 204 aa17.57■□□□□ 0.4
CHRFAM7A-202ENST00000397827 KCNC2Q96PR1 638 aa17.57■□□□□ 0.4
CHRFAM7A-202ENST00000397827 ALPK1Q96QP1 1244 aa17.57■□□□□ 0.4
CHRFAM7A-202ENST00000397827 CCDC177Q9NQR7 707 aaPredicted RBP17.57■□□□□ 0.4
CHRFAM7A-202ENST00000397827 SCN3BQ9NY72 215 aa17.57■□□□□ 0.4
CHRFAM7A-202ENST00000397827 NDUFAF4Q9P032 175 aa17.57■□□□□ 0.4
CHRFAM7A-202ENST00000397827 ASF1AQ9Y294 204 aa17.57■□□□□ 0.4
CHRFAM7A-202ENST00000397827 B3GNT3Q9Y2A9 372 aa17.57■□□□□ 0.4
CHRFAM7A-202ENST00000397827 FOXE1O00358 373 aaPredicted RBP17.56■□□□□ 0.4
CHRFAM7A-202ENST00000397827 PCDHGA12O60330 932 aa17.56■□□□□ 0.4
CHRFAM7A-202ENST00000397827 ADH1CP00326 375 aa17.56■□□□□ 0.4
CHRFAM7A-202ENST00000397827 JUNDP17535 347 aa17.56■□□□□ 0.4
CHRFAM7A-202ENST00000397827 ITGB7P26010 798 aa17.56■□□□□ 0.4
CHRFAM7A-202ENST00000397827 KRT20P35900 424 aa17.56■□□□□ 0.4
CHRFAM7A-202ENST00000397827 PNLIPRP1P54315 467 aa17.56■□□□□ 0.4
CHRFAM7A-202ENST00000397827 HIST2H2ACQ16777 129 aaPredicted RBP17.56■□□□□ 0.4
CHRFAM7A-202ENST00000397827 HIST2H2AA3Q6FI13 130 aa17.56■□□□□ 0.4
CHRFAM7A-202ENST00000397827 NFKBIDQ8NI38 313 aa17.56■□□□□ 0.4
CHRFAM7A-202ENST00000397827 RAD9AQ99638 391 aa17.56■□□□□ 0.4
CHRFAM7A-202ENST00000397827 SPATA9Q9BWV2 254 aa17.56■□□□□ 0.4
CHRFAM7A-202ENST00000397827 RABL2AQ9UBK7 228 aaPredicted RBP17.56■□□□□ 0.4
CHRFAM7A-202ENST00000397827 FAM20BO75063 409 aa17.56■□□□□ 0.4
CHRFAM7A-202ENST00000397827 PAPLNO95428 1278 aa17.56■□□□□ 0.4
CHRFAM7A-202ENST00000397827 IFITM2Q01629 132 aa17.56■□□□□ 0.4
CHRFAM7A-202ENST00000397827 TEAD4Q15561 434 aa17.56■□□□□ 0.4
CHRFAM7A-202ENST00000397827 SLC5A12Q1EHB4 618 aa17.56■□□□□ 0.4
CHRFAM7A-202ENST00000397827 ANKRD13BQ86YJ7 626 aa17.56■□□□□ 0.4
CHRFAM7A-202ENST00000397827 PLA2G15Q8NCC3 412 aa17.56■□□□□ 0.4
CHRFAM7A-202ENST00000397827 OR5AR1Q8NGP9 310 aa17.56■□□□□ 0.4
CHRFAM7A-202ENST00000397827 LILRB4Q8NHJ6 448 aa17.56■□□□□ 0.4
CHRFAM7A-202ENST00000397827 WFIKKN2Q8TEU8 576 aa17.56■□□□□ 0.4
CHRFAM7A-202ENST00000397827 OR8D1Q8WZ84 308 aa17.56■□□□□ 0.4
CHRFAM7A-202ENST00000397827 WDR34Q96EX3 536 aa17.56■□□□□ 0.4
CHRFAM7A-202ENST00000397827 MROQ9BYG7 248 aa17.56■□□□□ 0.4
CHRFAM7A-202ENST00000397827 ZDHHC5Q9C0B5 715 aa17.56■□□□□ 0.4
CHRFAM7A-202ENST00000397827 MAPRE3Q9UPY8 281 aa17.56■□□□□ 0.4
CHRFAM7A-202ENST00000397827 PADI2Q9Y2J8 665 aa17.56■□□□□ 0.4
CHRFAM7A-202ENST00000397827 PCDHGB1Q9Y5G3 927 aa17.56■□□□□ 0.4
CHRFAM7A-202ENST00000397827 CFAP20Q9Y6A4 193 aaKnown RBP17.56■□□□□ 0.4
CHRFAM7A-202ENST00000397827 HSPE1-MOB4S4R3N1 261 aa17.56■□□□□ 0.4
CHRFAM7A-202ENST00000397827 GOLGA4Q13439 2230 aaKnown RBP17.56■□□□□ 0.4
CHRFAM7A-202ENST00000397827 TNFRSF21O75509 655 aa17.55■□□□□ 0.4
CHRFAM7A-202ENST00000397827 VIPP01282 170 aa17.55■□□□□ 0.4
CHRFAM7A-202ENST00000397827 HNRNPA1L2Q32P51 320 aaKnown RBP17.55■□□□□ 0.4
CHRFAM7A-202ENST00000397827 RNF130Q86XS8 419 aa17.55■□□□□ 0.4
CHRFAM7A-202ENST00000397827 CACUL1Q86Y37 369 aa17.55■□□□□ 0.4
CHRFAM7A-202ENST00000397827 FEVQ99581 238 aa17.55■□□□□ 0.4
CHRFAM7A-202ENST00000397827 EPYCQ99645 322 aa17.55■□□□□ 0.4
CHRFAM7A-202ENST00000397827 PSD2Q9BQI7 771 aa17.55■□□□□ 0.4
CHRFAM7A-202ENST00000397827 SLC27A6Q9Y2P4 619 aa17.55■□□□□ 0.4
CHRFAM7A-202ENST00000397827 PCDHGB3Q9Y5G1 929 aa17.55■□□□□ 0.4
CHRFAM7A-202ENST00000397827 KIAA1549LQ6ZVL6 1849 aa17.55■□□□□ 0.4
CHRFAM7A-202ENST00000397827 REV3LO60673 3130 aa17.55■□□□□ 0.4
CHRFAM7A-202ENST00000397827 HOXC11O43248 304 aaPredicted RBP17.55■□□□□ 0.4
CHRFAM7A-202ENST00000397827 WBP4O75554 376 aaKnown RBP17.55■□□□□ 0.4
CHRFAM7A-202ENST00000397827 HNRNPA1P09651 372 aaKnown RBP eCLIP17.55■□□□□ 0.4
CHRFAM7A-202ENST00000397827 PSMB9P28065 219 aa17.55■□□□□ 0.4
CHRFAM7A-202ENST00000397827 ACADLP28330 430 aa17.55■□□□□ 0.4
CHRFAM7A-202ENST00000397827 PRIM2P49643 509 aa17.55■□□□□ 0.4
CHRFAM7A-202ENST00000397827 ELP6Q0PNE2 266 aa17.55■□□□□ 0.4
CHRFAM7A-202ENST00000397827 SCARB2Q14108 478 aa17.55■□□□□ 0.4
CHRFAM7A-202ENST00000397827 AHSA2Q719I0 299 aa17.55■□□□□ 0.4
CHRFAM7A-202ENST00000397827 BTLAQ7Z6A9 289 aa17.55■□□□□ 0.4
CHRFAM7A-202ENST00000397827 ETFBKMTQ8IXQ9 262 aa17.55■□□□□ 0.4
CHRFAM7A-202ENST00000397827 ABHD11Q8NFV4 315 aa17.55■□□□□ 0.4
CHRFAM7A-202ENST00000397827 FAM129BQ96TA1 746 aa17.55■□□□□ 0.4
CHRFAM7A-202ENST00000397827 ITM2CQ9NQX7 267 aa17.55■□□□□ 0.4
CHRFAM7A-202ENST00000397827 RLIMQ9NVW2 624 aa17.55■□□□□ 0.4
CHRFAM7A-202ENST00000397827 LYVE1Q9Y5Y7 322 aa17.55■□□□□ 0.4
CHRFAM7A-202ENST00000397827 PRAMEF25A6NGN4 478 aa17.54■□□□□ 0.4
CHRFAM7A-202ENST00000397827 TNFRSF11BO00300 401 aa17.54■□□□□ 0.4
CHRFAM7A-202ENST00000397827 TOR1BO14657 336 aa17.54■□□□□ 0.4
CHRFAM7A-202ENST00000397827 IL3P08700 152 aa17.54■□□□□ 0.4
CHRFAM7A-202ENST00000397827 SOAT1P35610 550 aa17.54■□□□□ 0.4
CHRFAM7A-202ENST00000397827 NKX2-5P52952 324 aaPredicted RBP17.54■□□□□ 0.4
CHRFAM7A-202ENST00000397827 CXCR4P61073 352 aa17.54■□□□□ 0.4
CHRFAM7A-202ENST00000397827 WDR45BQ5MNZ6 344 aa17.54■□□□□ 0.4
CHRFAM7A-202ENST00000397827 GCNT6Q5T4J0 391 aa17.54■□□□□ 0.4
CHRFAM7A-202ENST00000397827 RFPL4BQ6ZWI9 263 aa17.54■□□□□ 0.4
CHRFAM7A-202ENST00000397827 GET4Q7L5D6 327 aaPredicted RBP17.54■□□□□ 0.4
CHRFAM7A-202ENST00000397827 C11orf96Q7Z7L8 435 aa17.54■□□□□ 0.4
CHRFAM7A-202ENST00000397827 ENTHD1Q8IYW4 607 aa17.54■□□□□ 0.4
CHRFAM7A-202ENST00000397827 GOT1L1Q8NHS2 421 aaPredicted RBP17.54■□□□□ 0.4
CHRFAM7A-202ENST00000397827 APH1BQ8WW43 257 aa17.54■□□□□ 0.4
CHRFAM7A-202ENST00000397827 BADQ92934 168 aa17.54■□□□□ 0.4
CHRFAM7A-202ENST00000397827 CXorf40BQ96DE9 158 aa17.54■□□□□ 0.4
CHRFAM7A-202ENST00000397827 PCDHGA6Q9Y5G7 932 aa17.54■□□□□ 0.4
CHRFAM7A-202ENST00000397827 PLXND1Q9Y4D7 1925 aa17.54■□□□□ 0.4
CHRFAM7A-202ENST00000397827 HEPACAM2A8MVW5 462 aa17.54■□□□□ 0.4
CHRFAM7A-202ENST00000397827 GPR37L1O60883 481 aa17.54■□□□□ 0.4
CHRFAM7A-202ENST00000397827 CHI3L1P36222 383 aaPredicted RBP17.54■□□□□ 0.4
CHRFAM7A-202ENST00000397827 VASPP50552 380 aaPredicted RBP17.54■□□□□ 0.4
CHRFAM7A-202ENST00000397827 ZNF234Q14588 700 aa17.54■□□□□ 0.4
CHRFAM7A-202ENST00000397827 FAM71E1Q6IPT2 247 aa17.54■□□□□ 0.4
CHRFAM7A-202ENST00000397827 TMC5Q6UXY8 1006 aa17.54■□□□□ 0.4
CHRFAM7A-202ENST00000397827 VN1R5Q7Z5H4 357 aa17.54■□□□□ 0.4
CHRFAM7A-202ENST00000397827 PHF6Q8IWS0 365 aaKnown RBP eCLIP17.54■□□□□ 0.4
CHRFAM7A-202ENST00000397827 OR52N2Q8NGI0 321 aa17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms