RNA–Protein interactions for RNA: ENST00000300527.8

COL6A2-201, Transcript of collagen type VI alpha 2 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL6A2, Length 3,461 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-201ENST00000300527 GPC2Q8N158 579 aa14.06□□□□□ -0.16
COL6A2-201ENST00000300527 SYNPOQ8N3V7 929 aa14.06□□□□□ -0.16
COL6A2-201ENST00000300527 NMNAT1Q9HAN9 279 aaPredicted RBP14.06□□□□□ -0.16
COL6A2-201ENST00000300527 C3orf14Q9HBI5 128 aa14.06□□□□□ -0.16
COL6A2-201ENST00000300527 VPS29Q9UBQ0 182 aa14.06□□□□□ -0.16
COL6A2-201ENST00000300527 HCN4Q9Y3Q4 1203 aa14.06□□□□□ -0.16
COL6A2-201ENST00000300527 RALGAPA2Q2PPJ7 1873 aa14.06□□□□□ -0.16
COL6A2-201ENST00000300527 DICER1Q9UPY3 1922 aaKnown RBP14.06□□□□□ -0.16
COL6A2-201ENST00000300527 BRCA2P51587 3418 aa14.06□□□□□ -0.16
COL6A2-201ENST00000300527 A0A075B6Q4 140 aa14.06□□□□□ -0.16
COL6A2-201ENST00000300527 TRBC2A0A5B9 178 aa14.06□□□□□ -0.16
COL6A2-201ENST00000300527 CORO1AP31146 461 aaKnown RBP14.06□□□□□ -0.16
COL6A2-201ENST00000300527 MC1RQ01726 317 aa14.06□□□□□ -0.16
COL6A2-201ENST00000300527 ZXDCQ2QGD7 858 aaPredicted RBP14.06□□□□□ -0.16
COL6A2-201ENST00000300527 OR2G6Q5TZ20 316 aa14.06□□□□□ -0.16
COL6A2-201ENST00000300527 B3GLCTQ6Y288 498 aa14.06□□□□□ -0.16
COL6A2-201ENST00000300527 VRK3Q8IV63 474 aa14.06□□□□□ -0.16
COL6A2-201ENST00000300527 FAM9CQ8IZT9 166 aa14.06□□□□□ -0.16
COL6A2-201ENST00000300527 Q8N402 240 aa14.06□□□□□ -0.16
COL6A2-201ENST00000300527 FATE1Q969F0 183 aa14.06□□□□□ -0.16
COL6A2-201ENST00000300527 SLC35A5Q9BS91 424 aa14.06□□□□□ -0.16
COL6A2-201ENST00000300527 ISM1B1AKI9 464 aa14.06□□□□□ -0.16
COL6A2-201ENST00000300527 CASKO14936 926 aa14.06□□□□□ -0.16
COL6A2-201ENST00000300527 TLX2O43763 284 aaPredicted RBP14.06□□□□□ -0.16
COL6A2-201ENST00000300527 SEMG1P04279 462 aa14.06□□□□□ -0.16
COL6A2-201ENST00000300527 POU3F3P20264 500 aaPredicted RBP14.06□□□□□ -0.16
COL6A2-201ENST00000300527 ARF5P84085 180 aa14.06□□□□□ -0.16
COL6A2-201ENST00000300527 ZNF267Q14586 743 aaPredicted RBP14.06□□□□□ -0.16
COL6A2-201ENST00000300527 EIF4HQ15056 248 aaKnown RBP14.06□□□□□ -0.16
COL6A2-201ENST00000300527 DUSP7Q16829 419 aa14.06□□□□□ -0.16
COL6A2-201ENST00000300527 NPAS3Q8IXF0 933 aa14.06□□□□□ -0.16
COL6A2-201ENST00000300527 SLC37A3Q8NCC5 494 aa14.06□□□□□ -0.16
COL6A2-201ENST00000300527 KLHL6Q8WZ60 621 aa14.06□□□□□ -0.16
COL6A2-201ENST00000300527 TSSK6Q9BXA6 273 aa14.06□□□□□ -0.16
COL6A2-201ENST00000300527 RACGAP1Q9H0H5 632 aa14.06□□□□□ -0.16
COL6A2-201ENST00000300527 DNAJC11Q9NVH1 559 aa14.06□□□□□ -0.16
COL6A2-201ENST00000300527 SLC23A1Q9UHI7 598 aa14.06□□□□□ -0.16
COL6A2-201ENST00000300527 ZNF222Q9UK12 451 aa14.06□□□□□ -0.16
COL6A2-201ENST00000300527 SNX11Q9Y5W9 270 aa14.06□□□□□ -0.16
COL6A2-201ENST00000300527 PRAMEF25A6NGN4 478 aa14.05□□□□□ -0.16
COL6A2-201ENST00000300527 FADS2P1A8MWK0 482 aa14.05□□□□□ -0.16
COL6A2-201ENST00000300527 PLA2G10O15496 165 aa14.05□□□□□ -0.16
COL6A2-201ENST00000300527 LZTS3O60299 673 aaPredicted RBP14.05□□□□□ -0.16
COL6A2-201ENST00000300527 ETV6P41212 452 aa14.05□□□□□ -0.16
COL6A2-201ENST00000300527 RPS5P46782 204 aaKnown RBP14.05□□□□□ -0.16
COL6A2-201ENST00000300527 LRRC32Q14392 662 aa14.05□□□□□ -0.16
COL6A2-201ENST00000300527 GPRC6AQ5T6X5 926 aa14.05□□□□□ -0.16
COL6A2-201ENST00000300527 FRMPD2BQ6IN97 320 aa14.05□□□□□ -0.16
COL6A2-201ENST00000300527 ZFAND1Q8TCF1 268 aa14.05□□□□□ -0.16
COL6A2-201ENST00000300527 CIDECQ96AQ7 238 aaPredicted RBP14.05□□□□□ -0.16
COL6A2-201ENST00000300527 RAD9AQ99638 391 aa14.05□□□□□ -0.16
COL6A2-201ENST00000300527 MIXL1Q9H2W2 232 aa14.05□□□□□ -0.16
COL6A2-201ENST00000300527 SEC14L4Q9UDX3 406 aa14.05□□□□□ -0.16
COL6A2-201ENST00000300527 MBD1Q9UIS9 605 aaPredicted RBP14.05□□□□□ -0.16
COL6A2-201ENST00000300527 STUB1Q9UNE7 303 aa14.05□□□□□ -0.16
COL6A2-201ENST00000300527 TNS1Q9HBL0 1735 aaKnown RBP14.05□□□□□ -0.16
COL6A2-201ENST00000300527 C2orf78A6NCI8 922 aa14.05□□□□□ -0.16
COL6A2-201ENST00000300527 GCM2O75603 506 aaPredicted RBP14.05□□□□□ -0.16
COL6A2-201ENST00000300527 PDE9AO76083 593 aa14.05□□□□□ -0.16
COL6A2-201ENST00000300527 BPIP17213 487 aa14.05□□□□□ -0.16
COL6A2-201ENST00000300527 CCR7P32248 378 aa14.05□□□□□ -0.16
COL6A2-201ENST00000300527 HMGCLP35914 325 aa14.05□□□□□ -0.16
COL6A2-201ENST00000300527 CDH4P55283 916 aa14.05□□□□□ -0.16
COL6A2-201ENST00000300527 POU6F2P78424 691 aaPredicted RBP14.05□□□□□ -0.16
COL6A2-201ENST00000300527 KHDRBS1Q07666 443 aaKnown RBP eCLIP14.05□□□□□ -0.16
COL6A2-201ENST00000300527 P2RY14Q15391 338 aa14.05□□□□□ -0.16
COL6A2-201ENST00000300527 RPS26P11Q5JNZ5 115 aaPredicted RBP14.05□□□□□ -0.16
COL6A2-201ENST00000300527 GCNT6Q5T4J0 391 aa14.05□□□□□ -0.16
COL6A2-201ENST00000300527 PDZD3Q86UT5 571 aa14.05□□□□□ -0.16
COL6A2-201ENST00000300527 TMC8Q8IU68 726 aa14.05□□□□□ -0.16
COL6A2-201ENST00000300527 SPERTQ8NA61 448 aa14.05□□□□□ -0.16
COL6A2-201ENST00000300527 OR6C4Q8NGE1 309 aa14.05□□□□□ -0.16
COL6A2-201ENST00000300527 TBC1D20Q96BZ9 403 aa14.05□□□□□ -0.16
COL6A2-201ENST00000300527 GON7Q9BXV9 100 aa14.05□□□□□ -0.16
COL6A2-201ENST00000300527 PPIL3Q9H2H8 161 aaKnown RBP14.05□□□□□ -0.16
COL6A2-201ENST00000300527 HBQ1P09105 142 aa14.05□□□□□ -0.16
COL6A2-201ENST00000300527 GABRB1P18505 474 aa14.05□□□□□ -0.16
COL6A2-201ENST00000300527 ATP5C1P36542 298 aaKnown RBP14.05□□□□□ -0.16
COL6A2-201ENST00000300527 GSTM5P46439 218 aa14.05□□□□□ -0.16
COL6A2-201ENST00000300527 GZMKP49863 264 aa14.05□□□□□ -0.16
COL6A2-201ENST00000300527 BCL2L1Q07817 233 aa14.05□□□□□ -0.16
COL6A2-201ENST00000300527 NAE1Q13564 534 aa14.05□□□□□ -0.16
COL6A2-201ENST00000300527 SLC35F1Q5T1Q4 408 aa14.05□□□□□ -0.16
COL6A2-201ENST00000300527 SERPINA13PQ6UXR4 307 aa14.05□□□□□ -0.16
COL6A2-201ENST00000300527 VN1R5Q7Z5H4 357 aa14.05□□□□□ -0.16
COL6A2-201ENST00000300527 GATAD2BQ8WXI9 593 aa14.05□□□□□ -0.16
COL6A2-201ENST00000300527 OTULINQ96BN8 352 aa14.05□□□□□ -0.16
COL6A2-201ENST00000300527 NELL2Q99435 816 aa14.05□□□□□ -0.16
COL6A2-201ENST00000300527 P2RY13Q9BPV8 354 aa14.05□□□□□ -0.16
COL6A2-201ENST00000300527 SGK2Q9HBY8 427 aa14.05□□□□□ -0.16
COL6A2-201ENST00000300527 FKBP14Q9NWM8 211 aa14.05□□□□□ -0.16
COL6A2-201ENST00000300527 FAM120CQ9NX05 1096 aaKnown RBP14.05□□□□□ -0.16
COL6A2-201ENST00000300527 TRAPPC4Q9Y296 219 aa14.05□□□□□ -0.16
COL6A2-201ENST00000300527 FNDC1Q4ZHG4 1894 aaPredicted RBP14.04□□□□□ -0.16
COL6A2-201ENST00000300527 ZSWIM8A7E2V4 1837 aa14.04□□□□□ -0.16
COL6A2-201ENST00000300527 TRBV4-1A0A0J9YWV2 114 aa14.04□□□□□ -0.16
COL6A2-201ENST00000300527 HPGDSO60760 199 aa14.04□□□□□ -0.16
COL6A2-201ENST00000300527 SCN2BO60939 215 aa14.04□□□□□ -0.16
COL6A2-201ENST00000300527 SCG5P05408 212 aa14.04□□□□□ -0.16
COL6A2-201ENST00000300527 ATF4P18848 351 aaPredicted RBP14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms