RNA–Protein interactions for RNA: ENSMUST00000003857.6

Shkbp1-201, Transcript of SH3KBP1-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Shkbp1, Length 2,358 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shkbp1-201ENSMUST00000003857 Sirt4Q8R216 333 aa18■□□□□ 0.47
Shkbp1-201ENSMUST00000003857 Clec14aQ8VCP9 459 aa18■□□□□ 0.47
Shkbp1-201ENSMUST00000003857 Socs7Q8VHQ2 579 aa18■□□□□ 0.47
Shkbp1-201ENSMUST00000003857 AmnQ99JB7 458 aaKnown RBP18■□□□□ 0.47
Shkbp1-201ENSMUST00000003857 Ranbp3Q9CT10 491 aa18■□□□□ 0.47
Shkbp1-201ENSMUST00000003857 Panx1Q9JIP4 426 aa18■□□□□ 0.47
Shkbp1-201ENSMUST00000003857 KcpQ3U492 1550 aa18■□□□□ 0.47
Shkbp1-201ENSMUST00000003857 Btnl4A2CG29 586 aa17.99■□□□□ 0.47
Shkbp1-201ENSMUST00000003857 Hpse2B2RY83 592 aa17.99■□□□□ 0.47
Shkbp1-201ENSMUST00000003857 Olfr543E9PWI5 336 aa17.99■□□□□ 0.47
Shkbp1-201ENSMUST00000003857 Vmn2r7E9PYL5 915 aa17.99■□□□□ 0.47
Shkbp1-201ENSMUST00000003857 Gm7535F7CXE4 302 aa17.99■□□□□ 0.47
Shkbp1-201ENSMUST00000003857 Vmn2r12L7N217 831 aa17.99■□□□□ 0.47
Shkbp1-201ENSMUST00000003857 Hmox2O70252 315 aa17.99■□□□□ 0.47
Shkbp1-201ENSMUST00000003857 Ctla2aP12399 137 aa17.99■□□□□ 0.47
Shkbp1-201ENSMUST00000003857 Hoxd10P28359 340 aa17.99■□□□□ 0.47
Shkbp1-201ENSMUST00000003857 Hoxd13P70217 339 aa17.99■□□□□ 0.47
Shkbp1-201ENSMUST00000003857 Xkr5Q5GH66 676 aa17.99■□□□□ 0.47
Shkbp1-201ENSMUST00000003857 Stard3Q61542 446 aa17.99■□□□□ 0.47
Shkbp1-201ENSMUST00000003857 Bfsp2Q6NVD9 416 aa17.99■□□□□ 0.47
Shkbp1-201ENSMUST00000003857 Nadsyn1Q711T7 725 aa17.99■□□□□ 0.47
Shkbp1-201ENSMUST00000003857 Fblim1Q71FD7 375 aa17.99■□□□□ 0.47
Shkbp1-201ENSMUST00000003857 Olfr814Q7TRH4 310 aa17.99■□□□□ 0.47
Shkbp1-201ENSMUST00000003857 Olfr320Q7TRZ4 306 aa17.99■□□□□ 0.47
Shkbp1-201ENSMUST00000003857 Q8BH50 245 aa17.99■□□□□ 0.47
Shkbp1-201ENSMUST00000003857 Atp6v1hQ8BVE3 483 aa17.99■□□□□ 0.47
Shkbp1-201ENSMUST00000003857 Lancl3Q8CD19 420 aa17.99■□□□□ 0.47
Shkbp1-201ENSMUST00000003857 Crlf2Q8CII9 359 aa17.99■□□□□ 0.47
Shkbp1-201ENSMUST00000003857 Plac9Q8K262 108 aa17.99■□□□□ 0.47
Shkbp1-201ENSMUST00000003857 Olfr806Q8VFI2 313 aa17.99■□□□□ 0.47
Shkbp1-201ENSMUST00000003857 Srfbp1Q9CZ91 441 aaKnown RBP17.99■□□□□ 0.47
Shkbp1-201ENSMUST00000003857 Ccdc81Q9D5W4 654 aa17.99■□□□□ 0.47
Shkbp1-201ENSMUST00000003857 Ift46Q9DB07 301 aa17.99■□□□□ 0.47
Shkbp1-201ENSMUST00000003857 Cep350E9Q309 3095 aa17.99■□□□□ 0.47
Shkbp1-201ENSMUST00000003857 Btbd35f21A0A140T8Q5 498 aa17.99■□□□□ 0.47
Shkbp1-201ENSMUST00000003857 Zfp973A2BE20 318 aa17.99■□□□□ 0.47
Shkbp1-201ENSMUST00000003857 Cyp2j8G3UZ38 503 aa17.99■□□□□ 0.47
Shkbp1-201ENSMUST00000003857 Gm21800J3QMJ9 180 aa17.99■□□□□ 0.47
Shkbp1-201ENSMUST00000003857 Btbd35f22J3QN64 498 aa17.99■□□□□ 0.47
Shkbp1-201ENSMUST00000003857 Gm2888K7N746 267 aa17.99■□□□□ 0.47
Shkbp1-201ENSMUST00000003857 Kcnj2P35561 428 aa17.99■□□□□ 0.47
Shkbp1-201ENSMUST00000003857 Myadml2Q08AU7 307 aa17.99■□□□□ 0.47
Shkbp1-201ENSMUST00000003857 Fam105aQ3TVP5 353 aa17.99■□□□□ 0.47
Shkbp1-201ENSMUST00000003857 CfiQ61129 603 aa17.99■□□□□ 0.47
Shkbp1-201ENSMUST00000003857 Cd99l2Q8BIF0 237 aa17.99■□□□□ 0.47
Shkbp1-201ENSMUST00000003857 Pp2d1Q8BVT6 620 aa17.99■□□□□ 0.47
Shkbp1-201ENSMUST00000003857 BtdQ8CIF4 520 aa17.99■□□□□ 0.47
Shkbp1-201ENSMUST00000003857 Znf628Q8CJ78 1038 aa17.99■□□□□ 0.47
Shkbp1-201ENSMUST00000003857 Scara5Q8K299 491 aa17.99■□□□□ 0.47
Shkbp1-201ENSMUST00000003857 Ccdc71Q8VEG0 433 aa17.99■□□□□ 0.47
Shkbp1-201ENSMUST00000003857 Gm16286Q9CQX6 220 aa17.99■□□□□ 0.47
Shkbp1-201ENSMUST00000003857 Ankrd7Q9D504 279 aa17.99■□□□□ 0.47
Shkbp1-201ENSMUST00000003857 2200002D01RikQ9D809 114 aa17.99■□□□□ 0.47
Shkbp1-201ENSMUST00000003857 PrepQ9QUR6 710 aa17.99■□□□□ 0.47
Shkbp1-201ENSMUST00000003857 Rad9aQ9Z0F6 389 aa17.99■□□□□ 0.47
Shkbp1-201ENSMUST00000003857 Zcchc7B1AX39 541 aa17.98■□□□□ 0.47
Shkbp1-201ENSMUST00000003857 Vmn1r77E9PY60 306 aa17.98■□□□□ 0.47
Shkbp1-201ENSMUST00000003857 Mpzl2O70255 215 aa17.98■□□□□ 0.47
Shkbp1-201ENSMUST00000003857 Nid1P10493 1245 aa17.98■□□□□ 0.47
Shkbp1-201ENSMUST00000003857 Cst3P21460 140 aa17.98■□□□□ 0.47
Shkbp1-201ENSMUST00000003857 Ido1P28776 407 aaKnown RBP17.98■□□□□ 0.47
Shkbp1-201ENSMUST00000003857 Rab12P35283 243 aa17.98■□□□□ 0.47
Shkbp1-201ENSMUST00000003857 CtskP55097 329 aa17.98■□□□□ 0.47
Shkbp1-201ENSMUST00000003857 Ptpn2Q06180 406 aa17.98■□□□□ 0.47
Shkbp1-201ENSMUST00000003857 Nr1d2Q60674 576 aa17.98■□□□□ 0.47
Shkbp1-201ENSMUST00000003857 Amer3Q6NS69 780 aa17.98■□□□□ 0.47
Shkbp1-201ENSMUST00000003857 Cnksr3Q8BMA3 555 aa17.98■□□□□ 0.47
Shkbp1-201ENSMUST00000003857 Tmed10Q9D1D4 219 aaKnown RBP17.98■□□□□ 0.47
Shkbp1-201ENSMUST00000003857 RtcAQ9D7H3 366 aa17.98■□□□□ 0.47
Shkbp1-201ENSMUST00000003857 PgdQ9DCD0 483 aa17.98■□□□□ 0.47
Shkbp1-201ENSMUST00000003857 Olfr630Q9EQQ7 319 aa17.98■□□□□ 0.47
Shkbp1-201ENSMUST00000003857 NpvfQ9ESQ8 188 aa17.98■□□□□ 0.47
Shkbp1-201ENSMUST00000003857 IL36RNQ9QYY1 156 aa17.98■□□□□ 0.47
Shkbp1-201ENSMUST00000003857 Elf4Q9Z2U4 655 aa17.98■□□□□ 0.47
Shkbp1-201ENSMUST00000003857 Prpmp5E9PXN1 296 aa17.98■□□□□ 0.47
Shkbp1-201ENSMUST00000003857 F2rl3O88634 396 aa17.98■□□□□ 0.47
Shkbp1-201ENSMUST00000003857 Rin3P59729 980 aa17.98■□□□□ 0.47
Shkbp1-201ENSMUST00000003857 Sox4Q06831 440 aa17.98■□□□□ 0.47
Shkbp1-201ENSMUST00000003857 CrxosQ3UL53 246 aa17.98■□□□□ 0.47
Shkbp1-201ENSMUST00000003857 C2cd4cC2CD4Q5HZI2 419 aa17.98■□□□□ 0.47
Shkbp1-201ENSMUST00000003857 Prkg2Q61410 762 aa17.98■□□□□ 0.47
Shkbp1-201ENSMUST00000003857 Pan3Q640Q5 837 aa17.98■□□□□ 0.47
Shkbp1-201ENSMUST00000003857 Ugt2a2Q6PDD0 528 aa17.98■□□□□ 0.47
Shkbp1-201ENSMUST00000003857 Cdt1Q8R4E9 557 aa17.98■□□□□ 0.47
Shkbp1-201ENSMUST00000003857 Olfr850Q8VFF2 315 aa17.98■□□□□ 0.47
Shkbp1-201ENSMUST00000003857 Camk2gQ923T9 529 aa17.98■□□□□ 0.47
Shkbp1-201ENSMUST00000003857 5530401A14RikQ9D3H9 131 aa17.98■□□□□ 0.47
Shkbp1-201ENSMUST00000003857 1700086D15RikQ9D9E9 151 aa17.98■□□□□ 0.47
Shkbp1-201ENSMUST00000003857 TesminQ9WTJ6 475 aa17.98■□□□□ 0.47
Shkbp1-201ENSMUST00000003857 Gm7275E9Q1B3 247 aa17.97■□□□□ 0.47
Shkbp1-201ENSMUST00000003857 Sypl1O09117 261 aa17.97■□□□□ 0.47
Shkbp1-201ENSMUST00000003857 Hoxd4P10628 250 aa17.97■□□□□ 0.47
Shkbp1-201ENSMUST00000003857 Ccnb2P30276 398 aa17.97■□□□□ 0.47
Shkbp1-201ENSMUST00000003857 Nat3P50296 290 aa17.97■□□□□ 0.47
Shkbp1-201ENSMUST00000003857 Fcho2Q3UQN2 809 aa17.97■□□□□ 0.47
Shkbp1-201ENSMUST00000003857 TtpaQ8BWP5 278 aa17.97■□□□□ 0.47
Shkbp1-201ENSMUST00000003857 Bbs4Q8C1Z7 520 aa17.97■□□□□ 0.47
Shkbp1-201ENSMUST00000003857 Tmem72Q8C3K5 275 aa17.97■□□□□ 0.47
Shkbp1-201ENSMUST00000003857 Olfr693Q8VF89 316 aa17.97■□□□□ 0.47
Shkbp1-201ENSMUST00000003857 Acsm1Q91VA0 573 aa17.97■□□□□ 0.47
Retrieved 100 of 22,080 RNA–protein pairs in 33.3 ms