RNA–Protein interactions for RNA: ENST00000505553.5

TRAPPC13-208, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TRAPPC13, Length 1,410 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-208ENST00000505553 MISPQ8IVT2 679 aa3.53□□□□□ -1.85
TRAPPC13-208ENST00000505553 CERS5Q8N5B7 392 aa3.53□□□□□ -1.85
TRAPPC13-208ENST00000505553 LRRC17Q8N6Y2 441 aa3.53□□□□□ -1.85
TRAPPC13-208ENST00000505553 KLHDC1Q8N7A1 406 aa3.53□□□□□ -1.85
TRAPPC13-208ENST00000505553 BCORP1Q8N888 145 aa3.53□□□□□ -1.85
TRAPPC13-208ENST00000505553 NRACQ8N912 160 aa3.53□□□□□ -1.85
TRAPPC13-208ENST00000505553 LMNTD1Q8N9Z9 388 aa3.53□□□□□ -1.85
TRAPPC13-208ENST00000505553 MINDY2Q8NBR6 621 aa3.53□□□□□ -1.85
TRAPPC13-208ENST00000505553 SLC5A11Q8WWX8 675 aa3.53□□□□□ -1.85
TRAPPC13-208ENST00000505553 SHC3Q92529 594 aa3.53□□□□□ -1.85
TRAPPC13-208ENST00000505553 PIK3R3Q92569 461 aa3.53□□□□□ -1.85
TRAPPC13-208ENST00000505553 CCDC51Q96ER9 411 aa3.53□□□□□ -1.85
TRAPPC13-208ENST00000505553 ADGRG7Q96K78 797 aa3.53□□□□□ -1.85
TRAPPC13-208ENST00000505553 PCDHB18PQ96TA0 734 aa3.53□□□□□ -1.85
TRAPPC13-208ENST00000505553 PIGQQ9BRB3 760 aa3.53□□□□□ -1.85
TRAPPC13-208ENST00000505553 NTPCRQ9BSD7 190 aaKnown RBP3.53□□□□□ -1.85
TRAPPC13-208ENST00000505553 VIPAS39Q9H9C1 493 aa3.53□□□□□ -1.85
TRAPPC13-208ENST00000505553 COG4Q9H9E3 785 aa3.53□□□□□ -1.85
TRAPPC13-208ENST00000505553 ROPN1Q9HAT0 212 aaPredicted RBP3.53□□□□□ -1.85
TRAPPC13-208ENST00000505553 ATAD3AQ9NVI7 634 aa3.53□□□□□ -1.85
TRAPPC13-208ENST00000505553 PCDHA7Q9UN72 937 aa3.53□□□□□ -1.85
TRAPPC13-208ENST00000505553 CHMP2BQ9UQN3 213 aa3.53□□□□□ -1.85
TRAPPC13-208ENST00000505553 TNNQ9UQP3 1299 aa3.53□□□□□ -1.85
TRAPPC13-208ENST00000505553 COLEC10Q9Y6Z7 277 aa3.53□□□□□ -1.85
TRAPPC13-208ENST00000505553 IGHV4OR15-8A0A075B7B6 117 aa3.52□□□□□ -1.85
TRAPPC13-208ENST00000505553 TRBV5-5A0A0J9YX44 114 aa3.52□□□□□ -1.85
TRAPPC13-208ENST00000505553 CCL24O00175 119 aa3.52□□□□□ -1.85
TRAPPC13-208ENST00000505553 MAPK13O15264 365 aa3.52□□□□□ -1.85
TRAPPC13-208ENST00000505553 VPS26AO75436 327 aa3.52□□□□□ -1.85
TRAPPC13-208ENST00000505553 TOM1L1O75674 476 aa3.52□□□□□ -1.85
TRAPPC13-208ENST00000505553 KRT33AO76009 404 aa3.52□□□□□ -1.85
TRAPPC13-208ENST00000505553 MFN2O95140 757 aa3.52□□□□□ -1.85
TRAPPC13-208ENST00000505553 SNX4O95219 450 aa3.52□□□□□ -1.85
TRAPPC13-208ENST00000505553 SYNGR4O95473 234 aa3.52□□□□□ -1.85
TRAPPC13-208ENST00000505553 CPNE6O95741 557 aa3.52□□□□□ -1.85
TRAPPC13-208ENST00000505553 PROS1P07225 676 aa3.52□□□□□ -1.85
TRAPPC13-208ENST00000505553 CT45A8P0DMV1 189 aa3.52□□□□□ -1.85
TRAPPC13-208ENST00000505553 CT45A9P0DMV2 189 aa3.52□□□□□ -1.85
TRAPPC13-208ENST00000505553 GNSP15586 552 aa3.52□□□□□ -1.85
TRAPPC13-208ENST00000505553 GEMP55040 296 aa3.52□□□□□ -1.85
TRAPPC13-208ENST00000505553 B3GALT5-AS1P59052 145 aa3.52□□□□□ -1.85
TRAPPC13-208ENST00000505553 HERV-K104P63124 156 aa3.52□□□□□ -1.85
TRAPPC13-208ENST00000505553 MYBPC1Q00872 1141 aa3.52□□□□□ -1.85
TRAPPC13-208ENST00000505553 ZBTB17Q13105 803 aa3.52□□□□□ -1.85
TRAPPC13-208ENST00000505553 NME3Q13232 169 aa3.52□□□□□ -1.85
TRAPPC13-208ENST00000505553 SNTA1Q13424 505 aa3.52□□□□□ -1.85
TRAPPC13-208ENST00000505553 ITGA9Q13797 1035 aa3.52□□□□□ -1.85
TRAPPC13-208ENST00000505553 CEACAM7Q14002 265 aa3.52□□□□□ -1.85
TRAPPC13-208ENST00000505553 SF3B4Q15427 424 aaKnown RBP eCLIP3.52□□□□□ -1.85
TRAPPC13-208ENST00000505553 ETFDHQ16134 617 aa3.52□□□□□ -1.85
TRAPPC13-208ENST00000505553 GPR33Q49SQ1 333 aa3.52□□□□□ -1.85
TRAPPC13-208ENST00000505553 CT45A2Q5DJT8 189 aa3.52□□□□□ -1.85
TRAPPC13-208ENST00000505553 CMPK2Q5EBM0 449 aa3.52□□□□□ -1.85
TRAPPC13-208ENST00000505553 SIRPB2Q5JXA9 342 aa3.52□□□□□ -1.85
TRAPPC13-208ENST00000505553 LCN1P1Q5VSP4 162 aa3.52□□□□□ -1.85
TRAPPC13-208ENST00000505553 ZNF776Q68DI1 518 aaPredicted RBP3.52□□□□□ -1.85
TRAPPC13-208ENST00000505553 SLC27A4Q6P1M0 643 aa3.52□□□□□ -1.85
TRAPPC13-208ENST00000505553 KCTD8Q6ZWB6 473 aa3.52□□□□□ -1.85
TRAPPC13-208ENST00000505553 CENPLQ8N0S6 344 aaPredicted RBP3.52□□□□□ -1.85
TRAPPC13-208ENST00000505553 SLC43A2Q8N370 569 aa3.52□□□□□ -1.85
TRAPPC13-208ENST00000505553 ZNF441Q8N8Z8 693 aa3.52□□□□□ -1.85
TRAPPC13-208ENST00000505553 LRTM2Q8N967 370 aa3.52□□□□□ -1.85
TRAPPC13-208ENST00000505553 OR7A2PQ8NGA2 310 aa3.52□□□□□ -1.85
TRAPPC13-208ENST00000505553 OR10T2Q8NGX3 314 aa3.52□□□□□ -1.85
TRAPPC13-208ENST00000505553 RAB39BQ96DA2 213 aa3.52□□□□□ -1.85
TRAPPC13-208ENST00000505553 PHF21BQ96EK2 531 aa3.52□□□□□ -1.85
TRAPPC13-208ENST00000505553 SLC47A1Q96FL8 570 aa3.52□□□□□ -1.85
TRAPPC13-208ENST00000505553 SCRN2Q96FV2 425 aa3.52□□□□□ -1.85
TRAPPC13-208ENST00000505553 RPGRIP1Q96KN7 1286 aa3.52□□□□□ -1.85
TRAPPC13-208ENST00000505553 C4orf45Q96LM5 186 aa3.52□□□□□ -1.85
TRAPPC13-208ENST00000505553 ANP32EQ9BTT0 268 aa3.52□□□□□ -1.85
TRAPPC13-208ENST00000505553 TRIM6Q9C030 488 aaPredicted RBP3.52□□□□□ -1.85
TRAPPC13-208ENST00000505553 IL25Q9H293 177 aa3.52□□□□□ -1.85
TRAPPC13-208ENST00000505553 MTIF3Q9H2K0 278 aaKnown RBP3.52□□□□□ -1.85
TRAPPC13-208ENST00000505553 EBF2Q9HAK2 575 aa3.52□□□□□ -1.85
TRAPPC13-208ENST00000505553 PALMDQ9NP74 551 aa3.52□□□□□ -1.85
TRAPPC13-208ENST00000505553 HPS4Q9NQG7 708 aa3.52□□□□□ -1.85
TRAPPC13-208ENST00000505553 DDX28Q9NUL7 540 aaKnown RBP3.52□□□□□ -1.85
TRAPPC13-208ENST00000505553 ELOVL5Q9NYP7 299 aa3.52□□□□□ -1.85
TRAPPC13-208ENST00000505553 GTSE1Q9NYZ3 720 aa3.52□□□□□ -1.85
TRAPPC13-208ENST00000505553 ATXN10Q9UBB4 475 aa3.52□□□□□ -1.85
TRAPPC13-208ENST00000505553 IL20RAQ9UHF4 553 aa3.52□□□□□ -1.85
TRAPPC13-208ENST00000505553 MRPS7Q9Y2R9 242 aaKnown RBP3.52□□□□□ -1.85
TRAPPC13-208ENST00000505553 MFHAS1Q9Y4C4 1052 aa3.52□□□□□ -1.85
TRAPPC13-208ENST00000505553 ANGPTL3Q9Y5C1 460 aa3.52□□□□□ -1.85
TRAPPC13-208ENST00000505553 UMODL1Q5DID0 1318 aa3.51□□□□□ -1.85
TRAPPC13-208ENST00000505553 A0A1W2PS18 150 aa3.51□□□□□ -1.85
TRAPPC13-208ENST00000505553 CLEC18AA5D8T8 446 aa3.51□□□□□ -1.85
TRAPPC13-208ENST00000505553 TRIM49BA6NDI0 452 aa3.51□□□□□ -1.85
TRAPPC13-208ENST00000505553 EPHB6O15197 1021 aa3.51□□□□□ -1.85
TRAPPC13-208ENST00000505553 SLC22A2O15244 555 aa3.51□□□□□ -1.85
TRAPPC13-208ENST00000505553 CHADO15335 359 aa3.51□□□□□ -1.85
TRAPPC13-208ENST00000505553 ATP6V0E1O15342 81 aa3.51□□□□□ -1.85
TRAPPC13-208ENST00000505553 MAGEB3O15480 346 aa3.51□□□□□ -1.85
TRAPPC13-208ENST00000505553 KIF5CO60282 957 aa3.51□□□□□ -1.85
TRAPPC13-208ENST00000505553 LRP3O75074 770 aa3.51□□□□□ -1.85
TRAPPC13-208ENST00000505553 RHOBTB1O94844 696 aa3.51□□□□□ -1.85
TRAPPC13-208ENST00000505553 CRYABP02511 175 aaKnown RBP3.51□□□□□ -1.85
TRAPPC13-208ENST00000505553 HIST1H2AGP0C0S8 130 aaPredicted RBP3.51□□□□□ -1.85
TRAPPC13-208ENST00000505553 RRASP10301 218 aa3.51□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms