RNA–Protein interactions for RNA: ENST00000616390.1

CACNA1C-231, Transcript of calcium voltage-gated channel subunit alpha1 C, human

TSL 2 BASIC

Gene CACNA1C, Length 2,833 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNA1C-231	ENST00000616390	FNDC8	Q8TC99	324 aa		13.34	□□□□□ -0.27
CACNA1C-231	ENST00000616390	RAD21L1	Q9H4I0	556 aa		13.34	□□□□□ -0.27
CACNA1C-231	ENST00000616390	DYRK1B	Q9Y463	629 aa		13.34	□□□□□ -0.27
CACNA1C-231	ENST00000616390	ZNF99	A8MXY4	864 aa	Predicted RBP	13.33	□□□□□ -0.28
CACNA1C-231	ENST00000616390	UGDH	O60701	494 aa		13.33	□□□□□ -0.28
CACNA1C-231	ENST00000616390	DDX5	P17844	614 aa	Known RBP	13.33	□□□□□ -0.28
CACNA1C-231	ENST00000616390	FPR1	P21462	350 aa		13.33	□□□□□ -0.28
CACNA1C-231	ENST00000616390	TIA1	P31483	386 aa	Known RBP eCLIP	13.33	□□□□□ -0.28
CACNA1C-231	ENST00000616390	CRYBA2	P53672	197 aa		13.33	□□□□□ -0.28
CACNA1C-231	ENST00000616390	BPIFB3	P59826	476 aa		13.33	□□□□□ -0.28
CACNA1C-231	ENST00000616390	B2M	P61769	119 aa		13.33	□□□□□ -0.28
CACNA1C-231	ENST00000616390	RFX4	Q33E94	735 aa		13.33	□□□□□ -0.28
CACNA1C-231	ENST00000616390	KDM4D	Q6B0I6	523 aa		13.33	□□□□□ -0.28
CACNA1C-231	ENST00000616390	AHSA2	Q719I0	299 aa		13.33	□□□□□ -0.28
CACNA1C-231	ENST00000616390	COMMD6	Q7Z4G1	85 aa		13.33	□□□□□ -0.28
CACNA1C-231	ENST00000616390	SLC44A2	Q8IWA5	706 aa	Predicted RBP	13.33	□□□□□ -0.28
CACNA1C-231	ENST00000616390	OR56A3	Q8NH54	315 aa		13.33	□□□□□ -0.28
CACNA1C-231	ENST00000616390	CHTF18	Q8WVB6	975 aa		13.33	□□□□□ -0.28
CACNA1C-231	ENST00000616390	HHIP	Q96QV1	700 aa		13.33	□□□□□ -0.28
CACNA1C-231	ENST00000616390	TRIT1	Q9H3H1	467 aa	Known RBP	13.33	□□□□□ -0.28
CACNA1C-231	ENST00000616390	TBC1D23	Q9NUY8	699 aa		13.33	□□□□□ -0.28
CACNA1C-231	ENST00000616390	TMEM184C	Q9NVA4	438 aa		13.33	□□□□□ -0.28
CACNA1C-231	ENST00000616390	SNX8	Q9Y5X2	465 aa		13.33	□□□□□ -0.28
CACNA1C-231	ENST00000616390	ARPC4-TTLL3	A0A0A6YYG9	625 aa		13.33	□□□□□ -0.28
CACNA1C-231	ENST00000616390	CYP17A1	P05093	508 aa		13.33	□□□□□ -0.28
CACNA1C-231	ENST00000616390	ADH5	P11766	374 aa		13.33	□□□□□ -0.28
CACNA1C-231	ENST00000616390	PRKACB	P22694	351 aa		13.33	□□□□□ -0.28
CACNA1C-231	ENST00000616390	HOXA9	P31269	272 aa		13.33	□□□□□ -0.28
CACNA1C-231	ENST00000616390	PRIM2	P49643	509 aa		13.33	□□□□□ -0.28
CACNA1C-231	ENST00000616390	TAS2R50	P59544	299 aa		13.33	□□□□□ -0.28
CACNA1C-231	ENST00000616390	VBP1	P61758	197 aa		13.33	□□□□□ -0.28
CACNA1C-231	ENST00000616390	OCA2	Q04671	838 aa		13.33	□□□□□ -0.28
CACNA1C-231	ENST00000616390	DMC1	Q14565	340 aa		13.33	□□□□□ -0.28
CACNA1C-231	ENST00000616390	ERICH5	Q6P6B1	374 aa		13.33	□□□□□ -0.28
CACNA1C-231	ENST00000616390	SYNPO	Q8N3V7	929 aa		13.33	□□□□□ -0.28
CACNA1C-231	ENST00000616390	ZFP90	Q8TF47	636 aa		13.33	□□□□□ -0.28
CACNA1C-231	ENST00000616390	RORB	Q92753	470 aa		13.33	□□□□□ -0.28
CACNA1C-231	ENST00000616390	PLEKHA8	Q96JA3	519 aa		13.33	□□□□□ -0.28
CACNA1C-231	ENST00000616390	MAGED4	Q96JG8	741 aa		13.33	□□□□□ -0.28
CACNA1C-231	ENST00000616390	SLC35A5	Q9BS91	424 aa		13.33	□□□□□ -0.28
CACNA1C-231	ENST00000616390	NDEL1	Q9GZM8	345 aa		13.33	□□□□□ -0.28
CACNA1C-231	ENST00000616390	FANCF	Q9NPI8	374 aa		13.33	□□□□□ -0.28
CACNA1C-231	ENST00000616390	ADPRHL2	Q9NX46	363 aa		13.33	□□□□□ -0.28
CACNA1C-231	ENST00000616390	EXO1	Q9UQ84	846 aa	Known RBP	13.33	□□□□□ -0.28
CACNA1C-231	ENST00000616390	PCYT1B	Q9Y5K3	369 aa	Predicted RBP	13.33	□□□□□ -0.28
CACNA1C-231	ENST00000616390	GIMAP1-GIMAP5	A0A087WTJ2	511 aa		13.32	□□□□□ -0.28
CACNA1C-231	ENST00000616390	SH3PXD2B	A1X283	911 aa		13.32	□□□□□ -0.28
CACNA1C-231	ENST00000616390	ZNF8	P17098	575 aa	Predicted RBP	13.32	□□□□□ -0.28
CACNA1C-231	ENST00000616390	PCMT1	P22061	227 aa		13.32	□□□□□ -0.28
CACNA1C-231	ENST00000616390	RYK	P34925	604 aa		13.32	□□□□□ -0.28
CACNA1C-231	ENST00000616390	CHI3L1	P36222	383 aa	Predicted RBP	13.32	□□□□□ -0.28
CACNA1C-231	ENST00000616390	TGFBR1	P36897	503 aa		13.32	□□□□□ -0.28
CACNA1C-231	ENST00000616390	ASMT	P46597	345 aa		13.32	□□□□□ -0.28
CACNA1C-231	ENST00000616390	RPP38	P78345	283 aa	Known RBP	13.32	□□□□□ -0.28
CACNA1C-231	ENST00000616390	KCNJ10	P78508	379 aa		13.32	□□□□□ -0.28
CACNA1C-231	ENST00000616390	FPGS	Q05932	587 aa		13.32	□□□□□ -0.28
CACNA1C-231	ENST00000616390	ITGAD	Q13349	1161 aa		13.32	□□□□□ -0.28
CACNA1C-231	ENST00000616390	TOP3A	Q13472	1001 aa	Predicted RBP	13.32	□□□□□ -0.28
CACNA1C-231	ENST00000616390	E2F2	Q14209	437 aa		13.32	□□□□□ -0.28
CACNA1C-231	ENST00000616390	DUS1L	Q6P1R4	473 aa	Known RBP	13.32	□□□□□ -0.28
CACNA1C-231	ENST00000616390	SETD9	Q8NE22	299 aa		13.32	□□□□□ -0.28
CACNA1C-231	ENST00000616390	NFKBID	Q8NI38	313 aa		13.32	□□□□□ -0.28
CACNA1C-231	ENST00000616390	FAR1	Q8WVX9	515 aa		13.32	□□□□□ -0.28
CACNA1C-231	ENST00000616390	GIMAP5	Q96F15	307 aa		13.32	□□□□□ -0.28
CACNA1C-231	ENST00000616390	SCN3B	Q9NY72	215 aa		13.32	□□□□□ -0.28
CACNA1C-231	ENST00000616390	TMEM9	Q9P0T7	183 aa		13.32	□□□□□ -0.28
CACNA1C-231	ENST00000616390	TRPM6	Q9BX84	2022 aa		13.32	□□□□□ -0.28
CACNA1C-231	ENST00000616390	CKAP5	Q14008	2032 aa		13.32	□□□□□ -0.28
CACNA1C-231	ENST00000616390	OTOL1	A6NHN0	477 aa	Predicted RBP	13.32	□□□□□ -0.28
CACNA1C-231	ENST00000616390		J3KTA2	159 aa		13.32	□□□□□ -0.28
CACNA1C-231	ENST00000616390	TLL1	O43897	1013 aa		13.32	□□□□□ -0.28
CACNA1C-231	ENST00000616390	POP7	O75817	140 aa	Known RBP	13.32	□□□□□ -0.28
CACNA1C-231	ENST00000616390	NR1D2	Q14995	579 aa		13.32	□□□□□ -0.28
CACNA1C-231	ENST00000616390	SPIN4	Q56A73	249 aa		13.32	□□□□□ -0.28
CACNA1C-231	ENST00000616390	SNX29P2	Q8IUI4	249 aa		13.32	□□□□□ -0.28
CACNA1C-231	ENST00000616390	MUL1	Q969V5	352 aa		13.32	□□□□□ -0.28
CACNA1C-231	ENST00000616390	ARRDC3	Q96B67	414 aa		13.32	□□□□□ -0.28
CACNA1C-231	ENST00000616390	FCRL1	Q96LA6	429 aa		13.32	□□□□□ -0.28
CACNA1C-231	ENST00000616390	APOL4	Q9BPW4	351 aa		13.32	□□□□□ -0.28
CACNA1C-231	ENST00000616390	ASF1A	Q9Y294	204 aa		13.32	□□□□□ -0.28
CACNA1C-231	ENST00000616390	INSL6	Q9Y581	213 aa		13.32	□□□□□ -0.28
CACNA1C-231	ENST00000616390		M0R129	80 aa		13.31	□□□□□ -0.28
CACNA1C-231	ENST00000616390	QSOX1	O00391	747 aa		13.31	□□□□□ -0.28
CACNA1C-231	ENST00000616390	RTCA	O00442	366 aa	Known RBP	13.31	□□□□□ -0.28
CACNA1C-231	ENST00000616390	PRMT3	O60678	531 aa		13.31	□□□□□ -0.28
CACNA1C-231	ENST00000616390	MT-ND2	P03891	347 aa		13.31	□□□□□ -0.28
CACNA1C-231	ENST00000616390	C6	P13671	934 aa		13.31	□□□□□ -0.28
CACNA1C-231	ENST00000616390	GABARAPL2	P60520	117 aa		13.31	□□□□□ -0.28
CACNA1C-231	ENST00000616390	ZNF829	Q3KNS6	432 aa	Predicted RBP	13.31	□□□□□ -0.28
CACNA1C-231	ENST00000616390	TMC5	Q6UXY8	1006 aa		13.31	□□□□□ -0.28
CACNA1C-231	ENST00000616390	SLC16A12	Q6ZSM3	486 aa		13.31	□□□□□ -0.28
CACNA1C-231	ENST00000616390	MSANTD1	Q6ZTZ1	278 aa		13.31	□□□□□ -0.28
CACNA1C-231	ENST00000616390	RNF130	Q86XS8	419 aa		13.31	□□□□□ -0.28
CACNA1C-231	ENST00000616390	CROCCP3	Q8IVE0	287 aa		13.31	□□□□□ -0.28
CACNA1C-231	ENST00000616390	MMAA	Q8IVH4	418 aa	Known RBP	13.31	□□□□□ -0.28
CACNA1C-231	ENST00000616390	BORCS5	Q969J3	196 aa		13.31	□□□□□ -0.28
CACNA1C-231	ENST00000616390	FKBP10	Q96AY3	582 aa		13.31	□□□□□ -0.28
CACNA1C-231	ENST00000616390	NUS1	Q96E22	293 aa		13.31	□□□□□ -0.28
CACNA1C-231	ENST00000616390	C11orf24	Q96F05	449 aa	Predicted RBP	13.31	□□□□□ -0.28
CACNA1C-231	ENST00000616390	DTD2	Q96FN9	168 aa		13.31	□□□□□ -0.28

Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms