RNA–Protein interactions for RNA: ENST00000377670.8

HIF3A-205, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HIF3A, Length 5,852 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-205ENST00000377670 CXCR6O00574 342 aa10.46□□□□□ -0.74
HIF3A-205ENST00000377670 SLC22A1O15245 554 aa10.46□□□□□ -0.74
HIF3A-205ENST00000377670 GABBR2O75899 941 aa10.46□□□□□ -0.74
HIF3A-205ENST00000377670 IGHEP01854 428 aa10.46□□□□□ -0.74
HIF3A-205ENST00000377670 PDHA2P29803 388 aa10.46□□□□□ -0.74
HIF3A-205ENST00000377670 RORCP51449 518 aa10.46□□□□□ -0.74
HIF3A-205ENST00000377670 RAB2AP61019 212 aa10.46□□□□□ -0.74
HIF3A-205ENST00000377670 HHEXQ03014 270 aa10.46□□□□□ -0.74
HIF3A-205ENST00000377670 DNASE1L3Q13609 305 aa10.46□□□□□ -0.74
HIF3A-205ENST00000377670 LNX2Q8N448 690 aa10.46□□□□□ -0.74
HIF3A-205ENST00000377670 EFCAB11Q9BUY7 163 aa10.46□□□□□ -0.74
HIF3A-205ENST00000377670 ACTL7AQ9Y615 435 aa10.46□□□□□ -0.74
HIF3A-205ENST00000377670 MYO18AQ92614 2054 aaKnown RBP10.45□□□□□ -0.74
HIF3A-205ENST00000377670 SCN9AQ15858 1988 aa10.45□□□□□ -0.74
HIF3A-205ENST00000377670 TTC34A8MYJ7 566 aa10.45□□□□□ -0.74
HIF3A-205ENST00000377670 HAS3O00219 553 aa10.45□□□□□ -0.74
HIF3A-205ENST00000377670 GNB5O14775 395 aa10.45□□□□□ -0.74
HIF3A-205ENST00000377670 SCELO95171 688 aa10.45□□□□□ -0.74
HIF3A-205ENST00000377670 UROSP10746 265 aa10.45□□□□□ -0.74
HIF3A-205ENST00000377670 CCR10P46092 362 aa10.45□□□□□ -0.74
HIF3A-205ENST00000377670 AP2S1P53680 142 aaPredicted RBP10.45□□□□□ -0.74
HIF3A-205ENST00000377670 MTPNP58546 118 aa10.45□□□□□ -0.74
HIF3A-205ENST00000377670 PCDH1Q08174 1060 aa10.45□□□□□ -0.74
HIF3A-205ENST00000377670 PRKD1Q15139 912 aaPredicted RBP10.45□□□□□ -0.74
HIF3A-205ENST00000377670 TIGD6Q17RP2 521 aa10.45□□□□□ -0.74
HIF3A-205ENST00000377670 IDNKQ5T6J7 187 aa10.45□□□□□ -0.74
HIF3A-205ENST00000377670 ANKRD54Q6NXT1 300 aa10.45□□□□□ -0.74
HIF3A-205ENST00000377670 FAM92BQ6ZTR7 304 aa10.45□□□□□ -0.74
HIF3A-205ENST00000377670 ANKRD46Q86W74 232 aa10.45□□□□□ -0.74
HIF3A-205ENST00000377670 C7orf57Q8NEG2 295 aa10.45□□□□□ -0.74
HIF3A-205ENST00000377670 SLC22A8Q8TCC7 542 aa10.45□□□□□ -0.74
HIF3A-205ENST00000377670 NENFQ9UMX5 172 aa10.45□□□□□ -0.74
HIF3A-205ENST00000377670 TEX264Q9Y6I9 313 aa10.45□□□□□ -0.74
HIF3A-205ENST00000377670 C4AP0C0L4 1744 aa10.45□□□□□ -0.74
HIF3A-205ENST00000377670 A0A0G2JPF8 293 aa10.45□□□□□ -0.74
HIF3A-205ENST00000377670 HNRNPCL3B7ZW38 293 aa10.45□□□□□ -0.74
HIF3A-205ENST00000377670 SAP18O00422 153 aaKnown RBP10.45□□□□□ -0.74
HIF3A-205ENST00000377670 CD63P08962 238 aa10.45□□□□□ -0.74
HIF3A-205ENST00000377670 HNRNPCL4P0DMR1 293 aa10.45□□□□□ -0.74
HIF3A-205ENST00000377670 BDKRB1P46663 353 aa10.45□□□□□ -0.74
HIF3A-205ENST00000377670 CRTC2Q53ET0 693 aaPredicted RBP10.45□□□□□ -0.74
HIF3A-205ENST00000377670 NCCRP1Q6ZVX7 275 aaPredicted RBP10.45□□□□□ -0.74
HIF3A-205ENST00000377670 RTL10Q7L3V2 364 aa10.45□□□□□ -0.74
HIF3A-205ENST00000377670 LIX1LQ8IVB5 337 aa10.45□□□□□ -0.74
HIF3A-205ENST00000377670 ZDHHC21Q8IVQ6 265 aa10.45□□□□□ -0.74
HIF3A-205ENST00000377670 CMTM7Q96FZ5 175 aa10.45□□□□□ -0.74
HIF3A-205ENST00000377670 EBPLQ9BY08 206 aa10.45□□□□□ -0.74
HIF3A-205ENST00000377670 MED31Q9Y3C7 131 aa10.45□□□□□ -0.74
HIF3A-205ENST00000377670 A0A0U1RQS6 177 aa10.45□□□□□ -0.74
HIF3A-205ENST00000377670 RBM47A0AV96 593 aaKnown RBP10.45□□□□□ -0.74
HIF3A-205ENST00000377670 GSRP00390 522 aa10.45□□□□□ -0.74
HIF3A-205ENST00000377670 FUT4P22083 530 aa10.45□□□□□ -0.74
HIF3A-205ENST00000377670 GNALP38405 381 aa10.45□□□□□ -0.74
HIF3A-205ENST00000377670 SLC6A9P48067 706 aa10.45□□□□□ -0.74
HIF3A-205ENST00000377670 RASGEF1BQ0VAM2 473 aa10.45□□□□□ -0.74
HIF3A-205ENST00000377670 NOXRED1Q6NXP6 359 aa10.45□□□□□ -0.74
HIF3A-205ENST00000377670 PDSS2Q86YH6 399 aa10.45□□□□□ -0.74
HIF3A-205ENST00000377670 SETD6Q8TBK2 473 aa10.45□□□□□ -0.74
HIF3A-205ENST00000377670 TSEN15Q8WW01 171 aaKnown RBP10.45□□□□□ -0.74
HIF3A-205ENST00000377670 RLN3Q8WXF3 142 aa10.45□□□□□ -0.74
HIF3A-205ENST00000377670 PHF7Q9BWX1 381 aaPredicted RBP10.45□□□□□ -0.74
HIF3A-205ENST00000377670 MKKSQ9NPJ1 570 aaPredicted RBP10.45□□□□□ -0.74
HIF3A-205ENST00000377670 HCFC2Q9Y5Z7 792 aa10.45□□□□□ -0.74
HIF3A-205ENST00000377670 NUMBLQ9Y6R0 609 aa10.45□□□□□ -0.74
HIF3A-205ENST00000377670 SIPA1L3O60292 1781 aaPredicted RBP10.45□□□□□ -0.74
HIF3A-205ENST00000377670 MYH7BA7E2Y1 1941 aa10.45□□□□□ -0.74
HIF3A-205ENST00000377670 RIIAD1A6NNX1 92 aa10.45□□□□□ -0.74
HIF3A-205ENST00000377670 GLDCP23378 1020 aa10.45□□□□□ -0.74
HIF3A-205ENST00000377670 ARHGDIBP52566 201 aa10.45□□□□□ -0.74
HIF3A-205ENST00000377670 FOXC1Q12948 553 aa10.45□□□□□ -0.74
HIF3A-205ENST00000377670 ECH1Q13011 328 aa10.45□□□□□ -0.74
HIF3A-205ENST00000377670 OR5L2Q8NGL0 311 aa10.45□□□□□ -0.74
HIF3A-205ENST00000377670 THAP3Q8WTV1 239 aaPredicted RBP10.45□□□□□ -0.74
HIF3A-205ENST00000377670 MSANTD3Q96H12 275 aa10.45□□□□□ -0.74
HIF3A-205ENST00000377670 PRRX2Q99811 253 aa10.45□□□□□ -0.74
HIF3A-205ENST00000377670 FNIP2Q9P278 1114 aa10.45□□□□□ -0.74
HIF3A-205ENST00000377670 PLAGL1Q9UM63 463 aa10.45□□□□□ -0.74
HIF3A-205ENST00000377670 I3L521 148 aa10.45□□□□□ -0.74
HIF3A-205ENST00000377670 MPZL2O60487 215 aa10.45□□□□□ -0.74
HIF3A-205ENST00000377670 HCN1O60741 890 aa10.45□□□□□ -0.74
HIF3A-205ENST00000377670 MT-ND5P03915 603 aa10.45□□□□□ -0.74
HIF3A-205ENST00000377670 RAP2AP10114 183 aa10.45□□□□□ -0.74
HIF3A-205ENST00000377670 CBX5P45973 191 aa10.45□□□□□ -0.74
HIF3A-205ENST00000377670 STK19P49842 368 aaPredicted RBP10.45□□□□□ -0.74
HIF3A-205ENST00000377670 AP3S2P59780 193 aa10.45□□□□□ -0.74
HIF3A-205ENST00000377670 WSCD2Q2TBF2 565 aa10.45□□□□□ -0.74
HIF3A-205ENST00000377670 DCST1Q5T197 706 aa10.45□□□□□ -0.74
HIF3A-205ENST00000377670 EPYCQ99645 322 aa10.45□□□□□ -0.74
HIF3A-205ENST00000377670 GPN2Q9H9Y4 310 aaPredicted RBP10.45□□□□□ -0.74
HIF3A-205ENST00000377670 HHATLQ9HCP6 504 aa10.45□□□□□ -0.74
HIF3A-205ENST00000377670 MAN2B2Q9Y2E5 1009 aa10.45□□□□□ -0.74
HIF3A-205ENST00000377670 PCDHGA6Q9Y5G7 932 aa10.45□□□□□ -0.74
HIF3A-205ENST00000377670 PCDHGA2Q9Y5H1 932 aa10.45□□□□□ -0.74
HIF3A-205ENST00000377670 DNAJA2O60884 412 aa10.44□□□□□ -0.74
HIF3A-205ENST00000377670 YES1P07947 543 aa10.44□□□□□ -0.74
HIF3A-205ENST00000377670 GP1BBP13224 206 aa10.44□□□□□ -0.74
HIF3A-205ENST00000377670 XRCC1P18887 633 aaPredicted RBP10.44□□□□□ -0.74
HIF3A-205ENST00000377670 SFT2D3Q587I9 215 aa10.44□□□□□ -0.74
HIF3A-205ENST00000377670 CLLU1OSQ5K130 101 aa10.44□□□□□ -0.74
HIF3A-205ENST00000377670 RBM48Q5RL73 367 aaKnown RBP10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms