RNA–Protein interactions for RNA: ENST00000352993.7

BRCA1-201, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 3,668 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-201ENST00000352993 AQP11Q8NBQ7 271 aa7.34□□□□□ -1.23
BRCA1-201ENST00000352993 ARRDC4Q8NCT1 418 aa7.34□□□□□ -1.23
BRCA1-201ENST00000352993 DNAJB3Q8WWF6 145 aa7.34□□□□□ -1.23
BRCA1-201ENST00000352993 KLHL6Q8WZ60 621 aa7.34□□□□□ -1.23
BRCA1-201ENST00000352993 METTL2AQ96IZ6 378 aaKnown RBP7.34□□□□□ -1.23
BRCA1-201ENST00000352993 ZIC5Q96T25 663 aa7.34□□□□□ -1.23
BRCA1-201ENST00000352993 RAD9AQ99638 391 aa7.34□□□□□ -1.23
BRCA1-201ENST00000352993 CIPCQ9C0C6 399 aa7.34□□□□□ -1.23
BRCA1-201ENST00000352993 MIXL1Q9H2W2 232 aa7.34□□□□□ -1.23
BRCA1-201ENST00000352993 ZNF624Q9P2J8 865 aaPredicted RBP7.34□□□□□ -1.23
BRCA1-201ENST00000352993 PRKAB1Q9Y478 270 aa7.34□□□□□ -1.23
BRCA1-201ENST00000352993 PCDHGC4Q9Y5F7 938 aa7.34□□□□□ -1.23
BRCA1-201ENST00000352993 PTCH2Q9Y6C5 1203 aa7.34□□□□□ -1.23
BRCA1-201ENST00000352993 U3KQ87 197 aa7.34□□□□□ -1.23
BRCA1-201ENST00000352993 PHIPQ8WWQ0 1821 aa7.34□□□□□ -1.23
BRCA1-201ENST00000352993 A0A1W2PQH9 124 aa7.34□□□□□ -1.23
BRCA1-201ENST00000352993 OR5K3A6NET4 321 aa7.34□□□□□ -1.23
BRCA1-201ENST00000352993 J3KTA2 159 aa7.34□□□□□ -1.23
BRCA1-201ENST00000352993 KLK8O60259 260 aa7.34□□□□□ -1.23
BRCA1-201ENST00000352993 HPGDSO60760 199 aa7.34□□□□□ -1.23
BRCA1-201ENST00000352993 ICAM2P13598 275 aa7.34□□□□□ -1.23
BRCA1-201ENST00000352993 ZNF30P17039 623 aa7.34□□□□□ -1.23
BRCA1-201ENST00000352993 LPOP22079 712 aaPredicted RBP7.34□□□□□ -1.23
BRCA1-201ENST00000352993 GZMMP51124 257 aa7.34□□□□□ -1.23
BRCA1-201ENST00000352993 CLCN7P51798 805 aa7.34□□□□□ -1.23
BRCA1-201ENST00000352993 TBX4P57082 545 aa7.34□□□□□ -1.23
BRCA1-201ENST00000352993 C2orf80Q0P641 193 aa7.34□□□□□ -1.23
BRCA1-201ENST00000352993 P2RY14Q15391 338 aa7.34□□□□□ -1.23
BRCA1-201ENST00000352993 DUOXA1Q1HG43 343 aa7.34□□□□□ -1.23
BRCA1-201ENST00000352993 UAP1L1Q3KQV9 507 aa7.34□□□□□ -1.23
BRCA1-201ENST00000352993 RNASE12Q5GAN4 147 aaKnown RBP7.34□□□□□ -1.23
BRCA1-201ENST00000352993 TOR1AIP1Q5JTV8 583 aa7.34□□□□□ -1.23
BRCA1-201ENST00000352993 MFSD14CQ5VZR4 134 aa7.34□□□□□ -1.23
BRCA1-201ENST00000352993 BRAT1Q6PJG6 821 aa7.34□□□□□ -1.23
BRCA1-201ENST00000352993 CASP12Q6UXS9 341 aa7.34□□□□□ -1.23
BRCA1-201ENST00000352993 BCDIN3DQ7Z5W3 292 aaKnown RBP7.34□□□□□ -1.23
BRCA1-201ENST00000352993 ADGRD2Q7Z7M1 963 aa7.34□□□□□ -1.23
BRCA1-201ENST00000352993 SERPINA11Q86U17 422 aa7.34□□□□□ -1.23
BRCA1-201ENST00000352993 PDZD3Q86UT5 571 aa7.34□□□□□ -1.23
BRCA1-201ENST00000352993 METTL23Q86XA0 190 aa7.34□□□□□ -1.23
BRCA1-201ENST00000352993 CFAP52Q8N1V2 620 aa7.34□□□□□ -1.23
BRCA1-201ENST00000352993 MTMR14Q8NCE2 650 aa7.34□□□□□ -1.23
BRCA1-201ENST00000352993 DNAJB8Q8NHS0 232 aa7.34□□□□□ -1.23
BRCA1-201ENST00000352993 AP3S1Q92572 193 aa7.34□□□□□ -1.23
BRCA1-201ENST00000352993 UPRTQ96BW1 309 aa7.34□□□□□ -1.23
BRCA1-201ENST00000352993 ZBED6CLQ96FA7 236 aaPredicted RBP7.34□□□□□ -1.23
BRCA1-201ENST00000352993 KCTD7Q96MP8 289 aa7.34□□□□□ -1.23
BRCA1-201ENST00000352993 TPT1P8Q9HAU6 139 aa7.34□□□□□ -1.23
BRCA1-201ENST00000352993 SH3BP4Q9P0V3 963 aa7.34□□□□□ -1.23
BRCA1-201ENST00000352993 PPT2Q9UMR5 302 aa7.34□□□□□ -1.23
BRCA1-201ENST00000352993 MAN2B2Q9Y2E5 1009 aa7.34□□□□□ -1.23
BRCA1-201ENST00000352993 YARS2Q9Y2Z4 477 aaKnown RBP7.34□□□□□ -1.23
BRCA1-201ENST00000352993 PCDHGA2Q9Y5H1 932 aa7.34□□□□□ -1.23
BRCA1-201ENST00000352993 MCM3APO60318 1980 aa7.34□□□□□ -1.23
BRCA1-201ENST00000352993 PCDH17O14917 1159 aa7.34□□□□□ -1.23
BRCA1-201ENST00000352993 CSO75390 466 aaKnown RBP7.34□□□□□ -1.23
BRCA1-201ENST00000352993 IFNA7P01567 189 aa7.34□□□□□ -1.23
BRCA1-201ENST00000352993 SCG5P05408 212 aa7.34□□□□□ -1.23
BRCA1-201ENST00000352993 ADRA2AP08913 450 aa7.34□□□□□ -1.23
BRCA1-201ENST00000352993 PBX3P40426 434 aa7.34□□□□□ -1.23
BRCA1-201ENST00000352993 ADCYAP1R1P41586 468 aa7.34□□□□□ -1.23
BRCA1-201ENST00000352993 SMSP52788 366 aa7.34□□□□□ -1.23
BRCA1-201ENST00000352993 PCBP2Q15366 365 aaKnown RBP eCLIP7.34□□□□□ -1.232e-7■■■□□ 17.1
BRCA1-201ENST00000352993 AANATQ16613 207 aa7.34□□□□□ -1.23
BRCA1-201ENST00000352993 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.34□□□□□ -1.23
BRCA1-201ENST00000352993 RAB41Q5JT25 222 aa7.34□□□□□ -1.23
BRCA1-201ENST00000352993 CTSL3PQ5NE16 218 aa7.34□□□□□ -1.23
BRCA1-201ENST00000352993 C9orf62Q8N4C0 152 aa7.34□□□□□ -1.23
BRCA1-201ENST00000352993 RNF175Q8N4F7 328 aa7.34□□□□□ -1.23
BRCA1-201ENST00000352993 CLDN19Q8N6F1 224 aa7.34□□□□□ -1.23
BRCA1-201ENST00000352993 ZFP41Q8N8Y5 198 aa7.34□□□□□ -1.23
BRCA1-201ENST00000352993 SYT14Q8NB59 555 aa7.34□□□□□ -1.23
BRCA1-201ENST00000352993 CREB3L4Q8TEY5 395 aa7.34□□□□□ -1.23
BRCA1-201ENST00000352993 PSKH2Q96QS6 385 aa7.34□□□□□ -1.23
BRCA1-201ENST00000352993 NELL2Q99435 816 aa7.34□□□□□ -1.23
BRCA1-201ENST00000352993 TRIM62Q9BVG3 475 aa7.34□□□□□ -1.23
BRCA1-201ENST00000352993 CINPQ9BW66 212 aaPredicted RBP7.34□□□□□ -1.23
BRCA1-201ENST00000352993 C1QTNF6Q9BXI9 259 aa7.34□□□□□ -1.23
BRCA1-201ENST00000352993 ACPTQ9BZG2 426 aa7.34□□□□□ -1.23
BRCA1-201ENST00000352993 NLE1Q9NVX2 485 aaPredicted RBP7.34□□□□□ -1.23
BRCA1-201ENST00000352993 NEU3Q9UQ49 428 aa7.34□□□□□ -1.23
BRCA1-201ENST00000352993 RAI2Q9Y5P3 530 aa7.34□□□□□ -1.23
BRCA1-201ENST00000352993 BPTFQ12830 3046 aa7.34□□□□□ -1.24
BRCA1-201ENST00000352993 TRBV5-3A0A0A0MS03 114 aa7.33□□□□□ -1.24
BRCA1-201ENST00000352993 SH3BP5O60239 455 aa7.33□□□□□ -1.24
BRCA1-201ENST00000352993 B3GAT3O94766 335 aa7.33□□□□□ -1.24
BRCA1-201ENST00000352993 CLDN9O95484 217 aa7.33□□□□□ -1.24
BRCA1-201ENST00000352993 PEX11BO96011 259 aa7.33□□□□□ -1.24
BRCA1-201ENST00000352993 TALDO1P37837 337 aa7.33□□□□□ -1.24
BRCA1-201ENST00000352993 GSTM5P46439 218 aa7.33□□□□□ -1.24
BRCA1-201ENST00000352993 AVPR1BP47901 424 aa7.33□□□□□ -1.24
BRCA1-201ENST00000352993 ATN1P54259 1190 aaPredicted RBP7.33□□□□□ -1.24
BRCA1-201ENST00000352993 RHAGQ02094 409 aa7.33□□□□□ -1.24
BRCA1-201ENST00000352993 CSTF1Q05048 431 aaKnown RBP7.33□□□□□ -1.24
BRCA1-201ENST00000352993 TWF1Q12792 350 aa7.33□□□□□ -1.24
BRCA1-201ENST00000352993 SF1Q15637 639 aaKnown RBP7.33□□□□□ -1.24
BRCA1-201ENST00000352993 ZSWIM7Q19AV6 140 aa7.33□□□□□ -1.24
BRCA1-201ENST00000352993 GLYR1Q49A26 553 aaPredicted RBP7.33□□□□□ -1.24
BRCA1-201ENST00000352993 LRIF1Q5T3J3 769 aa7.33□□□□□ -1.24
BRCA1-201ENST00000352993 BICRALQ6AI39 1079 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms