RNA–Protein interactions for RNA: ENST00000260327.8

CTDSPL2-201, Transcript of CTD small phosphatase like 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDSPL2, Length 6,828 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-201ENST00000260327 KRTCAP2Q8N6L1 136 aa9.43□□□□□ -0.9
CTDSPL2-201ENST00000260327 UPF1Q92900 1129 aaKnown RBP eCLIP9.43□□□□□ -0.94e-7■■□□□ 11.4
CTDSPL2-201ENST00000260327 CCDC32Q9BV29 185 aa9.43□□□□□ -0.9
CTDSPL2-201ENST00000260327 OSBPL2Q9H1P3 480 aa9.43□□□□□ -0.9
CTDSPL2-201ENST00000260327 KCNK13Q9HB14 408 aa9.43□□□□□ -0.9
CTDSPL2-201ENST00000260327 VPS29Q9UBQ0 182 aa9.43□□□□□ -0.9
CTDSPL2-201ENST00000260327 ERVK-19Q9WJR5 959 aa9.43□□□□□ -0.9
CTDSPL2-201ENST00000260327 SLC22A14Q9Y267 594 aa9.43□□□□□ -0.9
CTDSPL2-201ENST00000260327 TLR6Q9Y2C9 796 aa9.43□□□□□ -0.9
CTDSPL2-201ENST00000260327 STYXL1Q9Y6J8 313 aa9.43□□□□□ -0.9
CTDSPL2-201ENST00000260327 URADA6NGE7 173 aa9.43□□□□□ -0.9
CTDSPL2-201ENST00000260327 GRIN3BO60391 1043 aa9.43□□□□□ -0.9
CTDSPL2-201ENST00000260327 CNTN5O94779 1100 aa9.43□□□□□ -0.9
CTDSPL2-201ENST00000260327 SLC35E2BP0CK96 405 aa9.43□□□□□ -0.9
CTDSPL2-201ENST00000260327 RAB3BP20337 219 aa9.43□□□□□ -0.9
CTDSPL2-201ENST00000260327 CRISP3P54108 245 aa9.43□□□□□ -0.9
CTDSPL2-201ENST00000260327 ABHD18Q0P651 414 aa9.43□□□□□ -0.9
CTDSPL2-201ENST00000260327 PTGR1Q14914 329 aa9.43□□□□□ -0.9
CTDSPL2-201ENST00000260327 TMEM44Q2T9K0 475 aa9.43□□□□□ -0.9
CTDSPL2-201ENST00000260327 SLC35F1Q5T1Q4 408 aa9.43□□□□□ -0.9
CTDSPL2-201ENST00000260327 GTF2IRD2BQ6EKJ0 949 aa9.43□□□□□ -0.9
CTDSPL2-201ENST00000260327 GTF2IRD2Q86UP8 949 aa9.43□□□□□ -0.9
CTDSPL2-201ENST00000260327 TP53INP2Q8IXH6 220 aa9.43□□□□□ -0.9
CTDSPL2-201ENST00000260327 ASB15Q8WXK1 588 aa9.43□□□□□ -0.9
CTDSPL2-201ENST00000260327 PTERQ96BW5 349 aa9.43□□□□□ -0.9
CTDSPL2-201ENST00000260327 NPY6RQ99463 290 aa9.43□□□□□ -0.9
CTDSPL2-201ENST00000260327 TMEM106CQ9BVX2 250 aa9.43□□□□□ -0.9
CTDSPL2-201ENST00000260327 OR10A4Q9H209 315 aa9.43□□□□□ -0.9
CTDSPL2-201ENST00000260327 LYARQ9NX58 379 aaKnown RBP9.43□□□□□ -0.9
CTDSPL2-201ENST00000260327 IL37Q9NZH6 218 aa9.43□□□□□ -0.9
CTDSPL2-201ENST00000260327 DNAJB5O75953 348 aa9.43□□□□□ -0.9
CTDSPL2-201ENST00000260327 HTR2AP28223 471 aa9.43□□□□□ -0.9
CTDSPL2-201ENST00000260327 HCAR3P49019 387 aa9.43□□□□□ -0.9
CTDSPL2-201ENST00000260327 NCBP2P52298 156 aaKnown RBP eCLIP9.43□□□□□ -0.92e-9■□□□□ 10.2
CTDSPL2-201ENST00000260327 FXYD6P3P58550 94 aa9.43□□□□□ -0.9
CTDSPL2-201ENST00000260327 DNAJB13P59910 316 aa9.43□□□□□ -0.9
CTDSPL2-201ENST00000260327 EIF5AL1Q6IS14 154 aaKnown RBP9.43□□□□□ -0.9
CTDSPL2-201ENST00000260327 GOLM1Q8NBJ4 401 aa9.43□□□□□ -0.9
CTDSPL2-201ENST00000260327 OR5H6Q8NGV6 325 aa9.43□□□□□ -0.9
CTDSPL2-201ENST00000260327 OR8K3Q8NH51 312 aa9.43□□□□□ -0.9
CTDSPL2-201ENST00000260327 PCNPQ8WW12 178 aaKnown RBP9.43□□□□□ -0.9
CTDSPL2-201ENST00000260327 NSUN3Q9H649 340 aaKnown RBP9.43□□□□□ -0.9
CTDSPL2-201ENST00000260327 HIF3AQ9Y2N7 669 aa9.43□□□□□ -0.9
CTDSPL2-201ENST00000260327 PARP4Q9UKK3 1724 aaKnown RBP9.43□□□□□ -0.9
CTDSPL2-201ENST00000260327 TRBV23OR9-2A0A075B6M9 112 aa9.42□□□□□ -0.9
CTDSPL2-201ENST00000260327 A0A1B0GVT2 93 aa9.42□□□□□ -0.9
CTDSPL2-201ENST00000260327 HPRP00739 348 aa9.42□□□□□ -0.9
CTDSPL2-201ENST00000260327 SRCP12931 536 aa9.42□□□□□ -0.9
CTDSPL2-201ENST00000260327 AHCYP23526 432 aa9.42□□□□□ -0.9
CTDSPL2-201ENST00000260327 ADH7P40394 386 aa9.42□□□□□ -0.9
CTDSPL2-201ENST00000260327 KHKP50053 298 aa9.42□□□□□ -0.9
CTDSPL2-201ENST00000260327 FADDQ13158 208 aa9.42□□□□□ -0.9
CTDSPL2-201ENST00000260327 BTN1A1Q13410 526 aa9.42□□□□□ -0.9
CTDSPL2-201ENST00000260327 ARFRP1Q13795 201 aa9.42□□□□□ -0.9
CTDSPL2-201ENST00000260327 PAMR1Q6UXH9 720 aa9.42□□□□□ -0.9
CTDSPL2-201ENST00000260327 LYSMD3Q7Z3D4 306 aa9.42□□□□□ -0.9
CTDSPL2-201ENST00000260327 DGLUCYQ7Z3D6 616 aa9.42□□□□□ -0.9
CTDSPL2-201ENST00000260327 MAF1Q9H063 256 aa9.42□□□□□ -0.9
CTDSPL2-201ENST00000260327 RGCCQ9H4X1 137 aa9.42□□□□□ -0.9
CTDSPL2-201ENST00000260327 CAPNS1P04632 268 aa9.42□□□□□ -0.9
CTDSPL2-201ENST00000260327 SCNN1AP37088 669 aa9.42□□□□□ -0.9
CTDSPL2-201ENST00000260327 GABARAPL2P60520 117 aa9.42□□□□□ -0.9
CTDSPL2-201ENST00000260327 ABCA11PQ4W5N1 156 aa9.42□□□□□ -0.9
CTDSPL2-201ENST00000260327 C10orf62Q5T681 223 aaPredicted RBP9.42□□□□□ -0.9
CTDSPL2-201ENST00000260327 TMEM220Q6QAJ8 160 aa9.42□□□□□ -0.9
CTDSPL2-201ENST00000260327 LHFPL3Q86UP9 236 aa9.42□□□□□ -0.9
CTDSPL2-201ENST00000260327 OR7G1Q8NGA0 311 aa9.42□□□□□ -0.9
CTDSPL2-201ENST00000260327 GTF2H4Q92759 462 aa9.42□□□□□ -0.9
CTDSPL2-201ENST00000260327 HCN4Q9Y3Q4 1203 aa9.42□□□□□ -0.9
CTDSPL2-201ENST00000260327 PCDHGA11Q9Y5H2 935 aa9.42□□□□□ -0.9
CTDSPL2-201ENST00000260327 A0A1B0GV50 99 aa9.42□□□□□ -0.9
CTDSPL2-201ENST00000260327 HAS3O00219 553 aa9.42□□□□□ -0.9
CTDSPL2-201ENST00000260327 SCAMP1O15126 338 aa9.42□□□□□ -0.9
CTDSPL2-201ENST00000260327 C8GP07360 202 aa9.42□□□□□ -0.9
CTDSPL2-201ENST00000260327 DRD5P21918 477 aa9.42□□□□□ -0.9
CTDSPL2-201ENST00000260327 CA5AP35218 305 aa9.42□□□□□ -0.9
CTDSPL2-201ENST00000260327 PRR5P85299 388 aa9.42□□□□□ -0.9
CTDSPL2-201ENST00000260327 FPGSQ05932 587 aa9.42□□□□□ -0.9
CTDSPL2-201ENST00000260327 INCA1Q0VD86 236 aa9.42□□□□□ -0.9
CTDSPL2-201ENST00000260327 SPCS2Q15005 226 aa9.42□□□□□ -0.9
CTDSPL2-201ENST00000260327 ALG11Q2TAA5 492 aa9.42□□□□□ -0.9
CTDSPL2-201ENST00000260327 AADACL4Q5VUY2 407 aa9.42□□□□□ -0.9
CTDSPL2-201ENST00000260327 USP50Q70EL3 339 aaPredicted RBP9.42□□□□□ -0.9
CTDSPL2-201ENST00000260327 AMIGO3Q86WK7 504 aa9.42□□□□□ -0.9
CTDSPL2-201ENST00000260327 ARL14EPQ8N8R7 260 aaPredicted RBP9.42□□□□□ -0.9
CTDSPL2-201ENST00000260327 TIFAQ96CG3 184 aa9.42□□□□□ -0.9
CTDSPL2-201ENST00000260327 S100A16Q96FQ6 103 aaKnown RBP9.42□□□□□ -0.9
CTDSPL2-201ENST00000260327 COQ10AQ96MF6 247 aa9.42□□□□□ -0.9
CTDSPL2-201ENST00000260327 NELL2Q99435 816 aa9.42□□□□□ -0.9
CTDSPL2-201ENST00000260327 MTG2Q9H4K7 406 aa9.42□□□□□ -0.9
CTDSPL2-201ENST00000260327 GKN1Q9NS71 199 aa9.42□□□□□ -0.9
CTDSPL2-201ENST00000260327 RPH3AQ9Y2J0 694 aaPredicted RBP9.42□□□□□ -0.9
CTDSPL2-201ENST00000260327 MANBAO00462 879 aa9.42□□□□□ -0.9
CTDSPL2-201ENST00000260327 GRM6O15303 877 aa9.42□□□□□ -0.9
CTDSPL2-201ENST00000260327 PRMT3O60678 531 aa9.42□□□□□ -0.9
CTDSPL2-201ENST00000260327 KRT33AO76009 404 aa9.42□□□□□ -0.9
CTDSPL2-201ENST00000260327 EPCAMP16422 314 aa9.42□□□□□ -0.9
CTDSPL2-201ENST00000260327 AKT2P31751 481 aa9.42□□□□□ -0.9
CTDSPL2-201ENST00000260327 ATP4BP51164 291 aa9.42□□□□□ -0.9
CTDSPL2-201ENST00000260327 APLP1P51693 650 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms