RNA–Protein interactions for RNA: ENST00000438419.6

TRAPPC13-204, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TRAPPC13, Length 1,437 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-204ENST00000438419 HILS1P60008 231 aa3.16□□□□□ -1.9
TRAPPC13-204ENST00000438419 CYCSP99999 105 aaKnown RBP3.16□□□□□ -1.9
TRAPPC13-204ENST00000438419 AKAP17AQ02040 695 aaKnown RBP3.16□□□□□ -1.9
TRAPPC13-204ENST00000438419 RPA4Q13156 261 aa3.16□□□□□ -1.9
TRAPPC13-204ENST00000438419 SRSF9Q13242 221 aaKnown RBP eCLIP3.16□□□□□ -1.9
TRAPPC13-204ENST00000438419 PTPN14Q15678 1187 aa3.16□□□□□ -1.9
TRAPPC13-204ENST00000438419 C2orf76Q3KRA6 126 aa3.16□□□□□ -1.9
TRAPPC13-204ENST00000438419 IFI44LQ53G44 452 aa3.16□□□□□ -1.9
TRAPPC13-204ENST00000438419 ZNF542PQ5EBM4 170 aa3.16□□□□□ -1.9
TRAPPC13-204ENST00000438419 ZNF789Q5FWF6 425 aa3.16□□□□□ -1.9
TRAPPC13-204ENST00000438419 FGD3Q5JSP0 725 aa3.16□□□□□ -1.9
TRAPPC13-204ENST00000438419 LRRC38Q5VT99 294 aa3.16□□□□□ -1.9
TRAPPC13-204ENST00000438419 SLC24A5Q71RS6 500 aa3.16□□□□□ -1.9
TRAPPC13-204ENST00000438419 GPC2Q8N158 579 aa3.16□□□□□ -1.9
TRAPPC13-204ENST00000438419 LPCAT1Q8NF37 534 aa3.16□□□□□ -1.9
TRAPPC13-204ENST00000438419 OR5T2Q8NGG2 359 aa3.16□□□□□ -1.9
TRAPPC13-204ENST00000438419 CKAP2Q8WWK9 683 aa3.16□□□□□ -1.9
TRAPPC13-204ENST00000438419 SNRNP40Q96DI7 357 aaKnown RBP3.16□□□□□ -1.9
TRAPPC13-204ENST00000438419 CDKN2AIPNLQ96HQ2 116 aa3.16□□□□□ -1.9
TRAPPC13-204ENST00000438419 RBM41Q96IZ5 413 aaKnown RBP3.16□□□□□ -1.9
TRAPPC13-204ENST00000438419 NSMCE3Q96MG7 304 aa3.16□□□□□ -1.9
TRAPPC13-204ENST00000438419 TSSK2Q96PF2 358 aa3.16□□□□□ -1.9
TRAPPC13-204ENST00000438419 PANX3Q96QZ0 392 aa3.16□□□□□ -1.9
TRAPPC13-204ENST00000438419 PIGQQ9BRB3 760 aa3.16□□□□□ -1.9
TRAPPC13-204ENST00000438419 IDI2Q9BXS1 227 aa3.16□□□□□ -1.9
TRAPPC13-204ENST00000438419 FGFBP2Q9BYJ0 223 aa3.16□□□□□ -1.9
TRAPPC13-204ENST00000438419 RNPEPL1Q9HAU8 725 aa3.16□□□□□ -1.9
TRAPPC13-204ENST00000438419 RAVER2Q9HCJ3 691 aaKnown RBP3.16□□□□□ -1.9
TRAPPC13-204ENST00000438419 MID1IP1Q9NPA3 183 aa3.16□□□□□ -1.9
TRAPPC13-204ENST00000438419 FBXW2Q9UKT8 454 aa3.16□□□□□ -1.9
TRAPPC13-204ENST00000438419 AGTPBP1Q9UPW5 1226 aa3.16□□□□□ -1.9
TRAPPC13-204ENST00000438419 NCKAP1Q9Y2A7 1128 aa3.16□□□□□ -1.9
TRAPPC13-204ENST00000438419 ANGPTL3Q9Y5C1 460 aa3.16□□□□□ -1.9
TRAPPC13-204ENST00000438419 PCDHGA1Q9Y5H4 931 aa3.16□□□□□ -1.9
TRAPPC13-204ENST00000438419 COLEC10Q9Y6Z7 277 aa3.16□□□□□ -1.9
TRAPPC13-204ENST00000438419 IGKV3D-15A0A087WSY6 115 aa3.15□□□□□ -1.91
TRAPPC13-204ENST00000438419 A0A0B4J203 849 aa3.15□□□□□ -1.91
TRAPPC13-204ENST00000438419 A0A1W2PR80 420 aa3.15□□□□□ -1.91
TRAPPC13-204ENST00000438419 NPIPA3F8WFD2 350 aa3.15□□□□□ -1.91
TRAPPC13-204ENST00000438419 DDX39AO00148 427 aaKnown RBP3.15□□□□□ -1.91
TRAPPC13-204ENST00000438419 PGRMC2O15173 223 aa3.15□□□□□ -1.91
TRAPPC13-204ENST00000438419 AKAP3O75969 853 aa3.15□□□□□ -1.91
TRAPPC13-204ENST00000438419 CLDN1O95832 211 aa3.15□□□□□ -1.91
TRAPPC13-204ENST00000438419 YES1P07947 543 aa3.15□□□□□ -1.91
TRAPPC13-204ENST00000438419 TRIM49P0CI25 452 aa3.15□□□□□ -1.91
TRAPPC13-204ENST00000438419 TRIM49CP0CI26 452 aa3.15□□□□□ -1.91
TRAPPC13-204ENST00000438419 P4HA1P13674 534 aa3.15□□□□□ -1.91
TRAPPC13-204ENST00000438419 CD59P13987 128 aa3.15□□□□□ -1.91
TRAPPC13-204ENST00000438419 GOT1P17174 413 aa3.15□□□□□ -1.91
TRAPPC13-204ENST00000438419 VCLP18206 1134 aa3.15□□□□□ -1.91
TRAPPC13-204ENST00000438419 HLA-DPA1P20036 260 aa3.15□□□□□ -1.91
TRAPPC13-204ENST00000438419 OPRL1P41146 370 aa3.15□□□□□ -1.91
TRAPPC13-204ENST00000438419 IER3P46695 156 aa3.15□□□□□ -1.91
TRAPPC13-204ENST00000438419 OR3A2P47893 321 aa3.15□□□□□ -1.91
TRAPPC13-204ENST00000438419 KHKP50053 298 aa3.15□□□□□ -1.91
TRAPPC13-204ENST00000438419 ADARP55265 1226 aaKnown RBP3.15□□□□□ -1.91
TRAPPC13-204ENST00000438419 KIAA1024LP59773 190 aa3.15□□□□□ -1.91
TRAPPC13-204ENST00000438419 DCDC1P59894 354 aa3.15□□□□□ -1.91
TRAPPC13-204ENST00000438419 CSNK2BP67870 215 aa3.15□□□□□ -1.91
TRAPPC13-204ENST00000438419 DRP2Q13474 957 aa3.15□□□□□ -1.91
TRAPPC13-204ENST00000438419 CDH18Q13634 790 aa3.15□□□□□ -1.91
TRAPPC13-204ENST00000438419 LASP1Q14847 261 aaKnown RBP3.15□□□□□ -1.91
TRAPPC13-204ENST00000438419 TAB1Q15750 504 aa3.15□□□□□ -1.91
TRAPPC13-204ENST00000438419 PM20D1Q6GTS8 502 aa3.15□□□□□ -1.91
TRAPPC13-204ENST00000438419 GPR141Q7Z602 305 aa3.15□□□□□ -1.91
TRAPPC13-204ENST00000438419 SIAH3Q8IW03 269 aa3.15□□□□□ -1.91
TRAPPC13-204ENST00000438419 SFRP1Q8N474 314 aa3.15□□□□□ -1.91
TRAPPC13-204ENST00000438419 GBP7Q8N8V2 638 aaPredicted RBP3.15□□□□□ -1.91
TRAPPC13-204ENST00000438419 AMER3Q8N944 861 aa3.15□□□□□ -1.91
TRAPPC13-204ENST00000438419 SMYD1Q8NB12 490 aa3.15□□□□□ -1.91
TRAPPC13-204ENST00000438419 SLCO2A1Q92959 643 aa3.15□□□□□ -1.91
TRAPPC13-204ENST00000438419 ZNF486Q96H40 463 aaPredicted RBP3.15□□□□□ -1.91
TRAPPC13-204ENST00000438419 C17orf62Q9BQA9 187 aa3.15□□□□□ -1.91
TRAPPC13-204ENST00000438419 ALKBH7Q9BT30 221 aaPredicted RBP3.15□□□□□ -1.91
TRAPPC13-204ENST00000438419 OSBPL8Q9BZF1 889 aa3.15□□□□□ -1.91
TRAPPC13-204ENST00000438419 SLC39A8Q9C0K1 460 aa3.15□□□□□ -1.91
TRAPPC13-204ENST00000438419 WWTR1Q9GZV5 400 aa3.15□□□□□ -1.91
TRAPPC13-204ENST00000438419 C10orf88Q9H8K7 445 aa3.15□□□□□ -1.91
TRAPPC13-204ENST00000438419 MED20Q9H944 212 aa3.15□□□□□ -1.91
TRAPPC13-204ENST00000438419 AKIRIN1Q9H9L7 192 aaPredicted RBP3.15□□□□□ -1.91
TRAPPC13-204ENST00000438419 RPF1Q9H9Y2 349 aaKnown RBP3.15□□□□□ -1.91
TRAPPC13-204ENST00000438419 TBC1D13Q9NVG8 400 aa3.15□□□□□ -1.91
TRAPPC13-204ENST00000438419 SPG21Q9NZD8 308 aa3.15□□□□□ -1.91
TRAPPC13-204ENST00000438419 AKAP7Q9P0M2 348 aaPredicted RBP3.15□□□□□ -1.91
TRAPPC13-204ENST00000438419 SLC12A6Q9UHW9 1150 aa3.15□□□□□ -1.91
TRAPPC13-204ENST00000438419 TRBV4-1A0A0J9YWV2 114 aa3.14□□□□□ -1.91
TRAPPC13-204ENST00000438419 H0YIG0 161 aa3.14□□□□□ -1.91
TRAPPC13-204ENST00000438419 DCXO43602 365 aa3.14□□□□□ -1.91
TRAPPC13-204ENST00000438419 ACSL4O60488 711 aa3.14□□□□□ -1.91
TRAPPC13-204ENST00000438419 IGHEP01854 428 aa3.14□□□□□ -1.91
TRAPPC13-204ENST00000438419 THEGLP0DJG4 465 aa3.14□□□□□ -1.91
TRAPPC13-204ENST00000438419 DPEP1P16444 411 aa3.14□□□□□ -1.91
TRAPPC13-204ENST00000438419 AADACP22760 399 aa3.14□□□□□ -1.91
TRAPPC13-204ENST00000438419 CASP3P42574 277 aa3.14□□□□□ -1.91
TRAPPC13-204ENST00000438419 SERPINH1P50454 418 aaKnown RBP3.14□□□□□ -1.91
TRAPPC13-204ENST00000438419 XGP55808 180 aa3.14□□□□□ -1.91
TRAPPC13-204ENST00000438419 GSCP56915 257 aaPredicted RBP3.14□□□□□ -1.91
TRAPPC13-204ENST00000438419 CETN1Q12798 172 aa3.14□□□□□ -1.91
TRAPPC13-204ENST00000438419 NPRL3Q12980 569 aa3.14□□□□□ -1.91
TRAPPC13-204ENST00000438419 TMEM132DQ14C87 1099 aa3.14□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms