RNA–Protein interactions for RNA: ENSMUST00000098548.7

Scn1b-201, Transcript of Sodium channel subunit beta-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Scn1b, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1b-201ENSMUST00000098548 Defa8P50706 81 aa21.78■■□□□ 1.08
Scn1b-201ENSMUST00000098548 Serpina7P61939 418 aa21.78■■□□□ 1.08
Scn1b-201ENSMUST00000098548 Cxcr5Q04683 374 aa21.78■■□□□ 1.08
Scn1b-201ENSMUST00000098548 Rad51Q08297 339 aa21.78■■□□□ 1.08
Scn1b-201ENSMUST00000098548 Mmp7Q10738 264 aa21.78■■□□□ 1.08
Scn1b-201ENSMUST00000098548 Kcnh6Q32ME0 950 aa21.78■■□□□ 1.08
Scn1b-201ENSMUST00000098548 Gm14226Q3TZL0 686 aa21.78■■□□□ 1.08
Scn1b-201ENSMUST00000098548 KizQ3UXL4 695 aa21.78■■□□□ 1.08
Scn1b-201ENSMUST00000098548 Mospd3Q8BGG6 235 aa21.78■■□□□ 1.08
Scn1b-201ENSMUST00000098548 Bag5Q8CI32 447 aa21.78■■□□□ 1.08
Scn1b-201ENSMUST00000098548 Slc29a4Q8R139 528 aa21.78■■□□□ 1.08
Scn1b-201ENSMUST00000098548 Otud7aQ8R554 926 aa21.78■■□□□ 1.08
Scn1b-201ENSMUST00000098548 Itfg1Q99KW9 610 aa21.78■■□□□ 1.08
Scn1b-201ENSMUST00000098548 MycbpQ9EQS3 103 aa21.78■■□□□ 1.08
Scn1b-201ENSMUST00000098548 Tagln3Q9R1Q8 199 aa21.78■■□□□ 1.08
Scn1b-201ENSMUST00000098548 Fem1aaQ9Z2G1 654 aa21.78■■□□□ 1.08
Scn1b-201ENSMUST00000098548 Frem2Q6NVD0 3160 aa21.77■■□□□ 1.08
Scn1b-201ENSMUST00000098548 PlgP20918 812 aa21.77■■□□□ 1.08
Scn1b-201ENSMUST00000098548 HnrnpkP61979 463 aaKnown RBP21.77■■□□□ 1.08
Scn1b-201ENSMUST00000098548 Q14AM7 275 aa21.77■■□□□ 1.08
Scn1b-201ENSMUST00000098548 Yipf3Q3UDR8 347 aa21.77■■□□□ 1.08
Scn1b-201ENSMUST00000098548 Q3USZ8 430 aa21.77■■□□□ 1.08
Scn1b-201ENSMUST00000098548 Drd1Q61616 446 aa21.77■■□□□ 1.08
Scn1b-201ENSMUST00000098548 Q8C3W1 322 aa21.77■■□□□ 1.08
Scn1b-201ENSMUST00000098548 TbcelQ8C5W3 424 aa21.77■■□□□ 1.08
Scn1b-201ENSMUST00000098548 Lrp11Q8CB67 483 aa21.77■■□□□ 1.08
Scn1b-201ENSMUST00000098548 Vmn1r89Q8R256 316 aa21.77■■□□□ 1.08
Scn1b-201ENSMUST00000098548 Olfr853Q8VGG6 305 aa21.77■■□□□ 1.08
Scn1b-201ENSMUST00000098548 MlycdQ99J39 492 aa21.77■■□□□ 1.08
Scn1b-201ENSMUST00000098548 Pacsin3Q99JB8 424 aa21.77■■□□□ 1.08
Scn1b-201ENSMUST00000098548 ArntlQ9WTL8 632 aa21.77■■□□□ 1.08
Scn1b-201ENSMUST00000098548 Racgap1Q9WVM1 628 aa21.77■■□□□ 1.08
Scn1b-201ENSMUST00000098548 Thbs4Q9Z1T2 963 aa21.77■■□□□ 1.08
Scn1b-201ENSMUST00000098548 L3mbtl1A2A5N8 826 aa21.76■■□□□ 1.07
Scn1b-201ENSMUST00000098548 Zfp395E9Q5N9 508 aa21.76■■□□□ 1.07
Scn1b-201ENSMUST00000098548 FpgtG5E8F4 590 aa21.76■■□□□ 1.07
Scn1b-201ENSMUST00000098548 Fkbp7O54998 218 aa21.76■■□□□ 1.07
Scn1b-201ENSMUST00000098548 Klk1b26P36369 261 aa21.76■■□□□ 1.07
Scn1b-201ENSMUST00000098548 Tbpl1P62340 186 aa21.76■■□□□ 1.07
Scn1b-201ENSMUST00000098548 Kcnj13P86046 360 aa21.76■■□□□ 1.07
Scn1b-201ENSMUST00000098548 Lpcat1Q3TFD2 534 aa21.76■■□□□ 1.07
Scn1b-201ENSMUST00000098548 Tmem102Q3UPR7 509 aa21.76■■□□□ 1.07
Scn1b-201ENSMUST00000098548 Glt8d2Q640P4 349 aa21.76■■□□□ 1.07
Scn1b-201ENSMUST00000098548 Sec24dQ6NXL1 1032 aa21.76■■□□□ 1.07
Scn1b-201ENSMUST00000098548 Fbxo42Q6PDJ6 717 aa21.76■■□□□ 1.07
Scn1b-201ENSMUST00000098548 Clec18aQ7TSQ1 534 aa21.76■■□□□ 1.07
Scn1b-201ENSMUST00000098548 Creg2Q8BGC9 288 aa21.76■■□□□ 1.07
Scn1b-201ENSMUST00000098548 Fjx1Q8BQB4 450 aa21.76■■□□□ 1.07
Scn1b-201ENSMUST00000098548 Nt5dc1Q8C5P5 467 aa21.76■■□□□ 1.07
Scn1b-201ENSMUST00000098548 Spin4Q8K1L2 249 aa21.76■■□□□ 1.07
Scn1b-201ENSMUST00000098548 Lrrc25Q8K1T1 297 aa21.76■■□□□ 1.07
Scn1b-201ENSMUST00000098548 Pcdhga11Q91XY8 933 aa21.76■■□□□ 1.07
Scn1b-201ENSMUST00000098548 Pcdha8Q91Y12 946 aa21.76■■□□□ 1.07
Scn1b-201ENSMUST00000098548 Ebna1bp2Q9D903 306 aaKnown RBP21.76■■□□□ 1.07
Scn1b-201ENSMUST00000098548 Clca3a2Q9EQR4 902 aa21.76■■□□□ 1.07
Scn1b-201ENSMUST00000098548 HnrnpfQ9Z2X1 415 aaKnown RBP21.76■■□□□ 1.07
Scn1b-201ENSMUST00000098548 Itih4A6X935 942 aa21.75■■□□□ 1.07
Scn1b-201ENSMUST00000098548 Gm3248K7N721 186 aa21.75■■□□□ 1.07
Scn1b-201ENSMUST00000098548 Hcn3O88705 779 aa21.75■■□□□ 1.07
Scn1b-201ENSMUST00000098548 Zfp60P16374 707 aa21.75■■□□□ 1.07
Scn1b-201ENSMUST00000098548 Pex2P55098 305 aa21.75■■□□□ 1.07
Scn1b-201ENSMUST00000098548 4930430A15RikQ05AC5 485 aa21.75■■□□□ 1.07
Scn1b-201ENSMUST00000098548 Larp7Q05CL8 570 aaKnown RBP21.75■■□□□ 1.07
Scn1b-201ENSMUST00000098548 Cyb5d1Q5NCY3 228 aa21.75■■□□□ 1.07
Scn1b-201ENSMUST00000098548 Q6P1I3 445 aa21.75■■□□□ 1.07
Scn1b-201ENSMUST00000098548 Map2k7Q8CE90 535 aa21.75■■□□□ 1.07
Scn1b-201ENSMUST00000098548 Retreg1dQ8VE91 480 aa21.75■■□□□ 1.07
Scn1b-201ENSMUST00000098548 Mrm1Q99J25 320 aa21.75■■□□□ 1.07
Scn1b-201ENSMUST00000098548 Otub2Q9CQX0 234 aa21.75■■□□□ 1.07
Scn1b-201ENSMUST00000098548 Paip2Q9D6V8 124 aa21.75■■□□□ 1.07
Scn1b-201ENSMUST00000098548 2010109A12RikQ9D875 119 aa21.75■■□□□ 1.07
Scn1b-201ENSMUST00000098548 Efhd2Q9D8Y0 240 aaKnown RBP21.75■■□□□ 1.07
Scn1b-201ENSMUST00000098548 TescQ9JKL5 214 aa21.75■■□□□ 1.07
Scn1b-201ENSMUST00000098548 Phf11A6H5X4 337 aa21.74■■□□□ 1.07
Scn1b-201ENSMUST00000098548 L3mbtl4B1B1A0 621 aa21.74■■□□□ 1.07
Scn1b-201ENSMUST00000098548 Zscan4bE9Q3G0 505 aa21.74■■□□□ 1.07
Scn1b-201ENSMUST00000098548 A630095N17RikJ3KMM7 116 aa21.74■■□□□ 1.07
Scn1b-201ENSMUST00000098548 Kpna4O35343 521 aa21.74■■□□□ 1.07
Scn1b-201ENSMUST00000098548 RxrgP28705 463 aa21.74■■□□□ 1.07
Scn1b-201ENSMUST00000098548 Ccr3P51678 359 aa21.74■■□□□ 1.07
Scn1b-201ENSMUST00000098548 Galnt3P70419 633 aa21.74■■□□□ 1.07
Scn1b-201ENSMUST00000098548 ElocP83940 112 aaKnown RBP21.74■■□□□ 1.07
Scn1b-201ENSMUST00000098548 Fmo5P97872 533 aa21.74■■□□□ 1.07
Scn1b-201ENSMUST00000098548 Pdcd4Q61823 469 aa21.74■■□□□ 1.07
Scn1b-201ENSMUST00000098548 Pik3r3Q64143 461 aa21.74■■□□□ 1.07
Scn1b-201ENSMUST00000098548 Nqo1Q64669 274 aa21.74■■□□□ 1.07
Scn1b-201ENSMUST00000098548 Usp7Q6A4J8 1103 aa21.74■■□□□ 1.07
Scn1b-201ENSMUST00000098548 CebpeQ6PZD9 281 aa21.74■■□□□ 1.07
Scn1b-201ENSMUST00000098548 Bnip1Q6QD59 228 aa21.74■■□□□ 1.07
Scn1b-201ENSMUST00000098548 Olfr1313Q7TQW8 311 aa21.74■■□□□ 1.07
Scn1b-201ENSMUST00000098548 Carnmt1Q80UY1 400 aa21.74■■□□□ 1.07
Scn1b-201ENSMUST00000098548 Gstm7Q80W21 218 aa21.74■■□□□ 1.07
Scn1b-201ENSMUST00000098548 Efr3aQ8BG67 819 aa21.74■■□□□ 1.07
Scn1b-201ENSMUST00000098548 Mblac2Q8BL86 279 aa21.74■■□□□ 1.07
Scn1b-201ENSMUST00000098548 Q8C3I9 435 aa21.74■■□□□ 1.07
Scn1b-201ENSMUST00000098548 Olfr677Q8VF06 312 aa21.74■■□□□ 1.07
Scn1b-201ENSMUST00000098548 Ptgr1Q91YR9 329 aa21.74■■□□□ 1.07
Scn1b-201ENSMUST00000098548 Gstt3Q99L20 241 aa21.74■■□□□ 1.07
Scn1b-201ENSMUST00000098548 Ern1Q9EQY0 977 aa21.74■■□□□ 1.07
Scn1b-201ENSMUST00000098548 Tgm1Q9JLF6 815 aa21.74■■□□□ 1.07
Retrieved 100 of 22,080 RNA–protein pairs in 31.7 ms