Protein–RNA interactions for Protein: J3KMM7

A630095N17Rik, RIKEN cDNA A630095N17 gene, mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
A630095N17RikJ3KMM7 Gm25239-201ENSMUST00000174915 86 ntBASIC38.36■■■■□ 3.73
A630095N17RikJ3KMM7 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC35.63■■■■□ 3.29
A630095N17RikJ3KMM7 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC35.11■■■■□ 3.21
A630095N17RikJ3KMM7 Gm24109-201ENSMUST00000175489 103 ntBASIC33.41■■■□□ 2.94
A630095N17RikJ3KMM7 Gm15042-201ENSMUST00000120212 883 ntBASIC33.2■■■□□ 2.91
A630095N17RikJ3KMM7 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC32.4■■■□□ 2.78
A630095N17RikJ3KMM7 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC32.38■■■□□ 2.77
A630095N17RikJ3KMM7 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC32.37■■■□□ 2.77
A630095N17RikJ3KMM7 Gm15045-201ENSMUST00000117359 883 ntBASIC32.37■■■□□ 2.77
A630095N17RikJ3KMM7 Gm23366-201ENSMUST00000175022 89 ntBASIC32■■■□□ 2.71
A630095N17RikJ3KMM7 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC31.85■■■□□ 2.69
A630095N17RikJ3KMM7 AC153911.1-202ENSMUST00000218534 1034 ntBASIC31.29■■■□□ 2.6
A630095N17RikJ3KMM7 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC31.02■■■□□ 2.56
A630095N17RikJ3KMM7 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC31■■■□□ 2.55
A630095N17RikJ3KMM7 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC31■■■□□ 2.55
A630095N17RikJ3KMM7 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC30.98■■■□□ 2.55
A630095N17RikJ3KMM7 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC30.89■■■□□ 2.54
A630095N17RikJ3KMM7 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
A630095N17RikJ3KMM7 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC30.72■■■□□ 2.51
A630095N17RikJ3KMM7 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC30.72■■■□□ 2.51
A630095N17RikJ3KMM7 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC30.51■■■□□ 2.47
A630095N17RikJ3KMM7 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC30.43■■■□□ 2.46
A630095N17RikJ3KMM7 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC30.42■■■□□ 2.46
A630095N17RikJ3KMM7 Gm25238-201ENSMUST00000174914 89 ntBASIC30.37■■■□□ 2.45
A630095N17RikJ3KMM7 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC30.19■■■□□ 2.42
A630095N17RikJ3KMM7 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC30.07■■■□□ 2.4
A630095N17RikJ3KMM7 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC29.98■■■□□ 2.39
A630095N17RikJ3KMM7 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC29.89■■■□□ 2.38
A630095N17RikJ3KMM7 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC29.82■■■□□ 2.36
A630095N17RikJ3KMM7 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC29.77■■■□□ 2.36
A630095N17RikJ3KMM7 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC29.76■■■□□ 2.35
A630095N17RikJ3KMM7 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC29.67■■■□□ 2.34
A630095N17RikJ3KMM7 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC29.66■■■□□ 2.34
A630095N17RikJ3KMM7 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC29.59■■■□□ 2.33
A630095N17RikJ3KMM7 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC29.47■■■□□ 2.31
A630095N17RikJ3KMM7 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC29.41■■■□□ 2.3
A630095N17RikJ3KMM7 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC29.37■■■□□ 2.29
A630095N17RikJ3KMM7 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC29.37■■■□□ 2.29
A630095N17RikJ3KMM7 Gm25262-201ENSMUST00000174934 133 ntBASIC29.3■■■□□ 2.28
A630095N17RikJ3KMM7 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC29.3■■■□□ 2.28
A630095N17RikJ3KMM7 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC29.12■■■□□ 2.25
A630095N17RikJ3KMM7 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC29.09■■■□□ 2.25
A630095N17RikJ3KMM7 Gm27325-201ENSMUST00000175467 74 ntBASIC29.02■■■□□ 2.24
A630095N17RikJ3KMM7 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC28.91■■■□□ 2.22
A630095N17RikJ3KMM7 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC28.86■■■□□ 2.21
A630095N17RikJ3KMM7 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC28.85■■■□□ 2.21
A630095N17RikJ3KMM7 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC28.84■■■□□ 2.21
A630095N17RikJ3KMM7 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC28.8■■■□□ 2.2
A630095N17RikJ3KMM7 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC28.74■■■□□ 2.19
A630095N17RikJ3KMM7 Rab21-202ENSMUST00000218831 843 ntBASIC28.72■■■□□ 2.19
A630095N17RikJ3KMM7 Gm26115-201ENSMUST00000175605 87 ntBASIC28.7■■■□□ 2.18
A630095N17RikJ3KMM7 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC28.7■■■□□ 2.18
A630095N17RikJ3KMM7 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC28.69■■■□□ 2.18
A630095N17RikJ3KMM7 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC28.69■■■□□ 2.18
A630095N17RikJ3KMM7 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC28.61■■■□□ 2.17
A630095N17RikJ3KMM7 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC28.56■■■□□ 2.16
A630095N17RikJ3KMM7 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC28.56■■■□□ 2.16
A630095N17RikJ3KMM7 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC28.5■■■□□ 2.15
A630095N17RikJ3KMM7 Gm8109-201ENSMUST00000194076 746 ntBASIC28.5■■■□□ 2.15
A630095N17RikJ3KMM7 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC28.48■■■□□ 2.15
A630095N17RikJ3KMM7 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC28.42■■■□□ 2.14
A630095N17RikJ3KMM7 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC28.39■■■□□ 2.14
A630095N17RikJ3KMM7 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC28.32■■■□□ 2.12
A630095N17RikJ3KMM7 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC28.32■■■□□ 2.12
A630095N17RikJ3KMM7 Psd-208ENSMUST00000224556 2034 ntBASIC28.31■■■□□ 2.12
A630095N17RikJ3KMM7 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC28.31■■■□□ 2.12
A630095N17RikJ3KMM7 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC28.16■■■□□ 2.1
A630095N17RikJ3KMM7 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC28.14■■■□□ 2.1
A630095N17RikJ3KMM7 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
A630095N17RikJ3KMM7 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC28.09■■■□□ 2.09
A630095N17RikJ3KMM7 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.09
A630095N17RikJ3KMM7 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC28.04■■■□□ 2.08
A630095N17RikJ3KMM7 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC28■■■□□ 2.07
A630095N17RikJ3KMM7 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC27.94■■■□□ 2.06
A630095N17RikJ3KMM7 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC27.93■■■□□ 2.06
A630095N17RikJ3KMM7 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC27.91■■■□□ 2.06
A630095N17RikJ3KMM7 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC27.9■■■□□ 2.06
A630095N17RikJ3KMM7 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC27.88■■■□□ 2.05
A630095N17RikJ3KMM7 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC27.85■■■□□ 2.05
A630095N17RikJ3KMM7 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC27.82■■■□□ 2.04
A630095N17RikJ3KMM7 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC27.77■■■□□ 2.04
A630095N17RikJ3KMM7 Gm17082-201ENSMUST00000166043 1091 ntBASIC27.76■■■□□ 2.03
A630095N17RikJ3KMM7 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC27.75■■■□□ 2.03
A630095N17RikJ3KMM7 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC27.73■■■□□ 2.03
A630095N17RikJ3KMM7 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC27.68■■■□□ 2.02
A630095N17RikJ3KMM7 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC27.66■■■□□ 2.02
A630095N17RikJ3KMM7 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC27.66■■■□□ 2.02
A630095N17RikJ3KMM7 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC27.59■■■□□ 2.01
A630095N17RikJ3KMM7 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC27.58■■■□□ 2.01
A630095N17RikJ3KMM7 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC27.57■■■□□ 2
A630095N17RikJ3KMM7 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC27.55■■■□□ 2
A630095N17RikJ3KMM7 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC27.53■■■□□ 2
A630095N17RikJ3KMM7 Gm27322-201ENSMUST00000184007 104 ntBASIC27.53■■■□□ 2
A630095N17RikJ3KMM7 Gm24804-201ENSMUST00000174982 85 ntBASIC27.52■■■□□ 2
A630095N17RikJ3KMM7 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
A630095N17RikJ3KMM7 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC27.5■■□□□ 1.99
A630095N17RikJ3KMM7 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC27.48■■□□□ 1.99
A630095N17RikJ3KMM7 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC27.44■■□□□ 1.98
A630095N17RikJ3KMM7 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC27.42■■□□□ 1.98
A630095N17RikJ3KMM7 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC27.4■■□□□ 1.98
Retrieved 100 of 76,532 protein–RNA pairs in 34 ms