RNA–Protein interactions for RNA: tF(GAA)D

tF(GAA)D, Transcript of Phenylalanine tRNA (tRNA-Phe), predicted by tRNAscan-SE analysis, yeastyeast

Gene tF(GAA)D, Length 73 nt, Biotype tRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
tF(GAA)DtF(GAA)D STB3Q12427 513 aa3.56□□□□□ -1.84
tF(GAA)DtF(GAA)D ILV1P00927 576 aaKnown RBP3.55□□□□□ -1.84
tF(GAA)DtF(GAA)D MET6P05694 767 aaKnown RBP3.55□□□□□ -1.84
tF(GAA)DtF(GAA)D SCP160P06105 1222 aaKnown RBP RIP-Chip data3.55□□□□□ -1.84not detected
tF(GAA)DtF(GAA)D DED1P06634 604 aaKnown RBP3.55□□□□□ -1.84
tF(GAA)DtF(GAA)D CIT2P08679 460 aa3.55□□□□□ -1.84
tF(GAA)DtF(GAA)D HCA4P20448 770 aaKnown RBP3.55□□□□□ -1.84
tF(GAA)DtF(GAA)D ESS1P22696 170 aa3.55□□□□□ -1.84
tF(GAA)DtF(GAA)D PEX28P38848 579 aa3.55□□□□□ -1.84
tF(GAA)DtF(GAA)D ESL1P40456 1118 aa3.55□□□□□ -1.84
tF(GAA)DtF(GAA)D MOB1P40484 314 aa3.55□□□□□ -1.84
tF(GAA)DtF(GAA)D KRI1P42846 591 aaKnown RBP3.55□□□□□ -1.84
tF(GAA)DtF(GAA)D YFL052WP43551 465 aa3.55□□□□□ -1.84
tF(GAA)DtF(GAA)D ORC4P54791 529 aa3.55□□□□□ -1.84
tF(GAA)DtF(GAA)D AIM33Q04516 312 aa3.55□□□□□ -1.84
tF(GAA)DtF(GAA)D HCR1Q05775 265 aaKnown RBP3.55□□□□□ -1.84
tF(GAA)DtF(GAA)D WHI4Q07655 649 aaKnown RBP3.55□□□□□ -1.84
tF(GAA)DtF(GAA)D MNL2Q12205 849 aa3.55□□□□□ -1.84
tF(GAA)DtF(GAA)D RRD2Q12461 358 aa3.55□□□□□ -1.84
tF(GAA)DtF(GAA)D TRP2P00899 507 aaKnown RBP3.54□□□□□ -1.84
tF(GAA)DtF(GAA)D SUP45P12385 437 aaKnown RBP3.54□□□□□ -1.84
tF(GAA)DtF(GAA)D WHI2P12611 486 aa3.54□□□□□ -1.84
tF(GAA)DtF(GAA)D APE1P14904 514 aa3.54□□□□□ -1.84
tF(GAA)DtF(GAA)D RNR3P21672 869 aaKnown RBP3.54□□□□□ -1.84
tF(GAA)DtF(GAA)D RAM1P22007 431 aa3.54□□□□□ -1.84
tF(GAA)DtF(GAA)D SIS2P36024 562 aa3.54□□□□□ -1.84
tF(GAA)DtF(GAA)D CCL1P37366 393 aa3.54□□□□□ -1.84
tF(GAA)DtF(GAA)D PTC4P38089 393 aa3.54□□□□□ -1.84
tF(GAA)DtF(GAA)D UBX7P38349 436 aa3.54□□□□□ -1.84
tF(GAA)DtF(GAA)D YHL026CP38740 315 aa3.54□□□□□ -1.84
tF(GAA)DtF(GAA)D AKR1P39010 764 aa3.54□□□□□ -1.84
tF(GAA)DtF(GAA)D LAM5P43560 674 aa3.54□□□□□ -1.84
tF(GAA)DtF(GAA)D DIP5P53388 608 aa3.54□□□□□ -1.84
tF(GAA)DtF(GAA)D BNI5P53890 448 aaKnown RBP3.54□□□□□ -1.84
tF(GAA)DtF(GAA)D SPP1Q03012 353 aa3.54□□□□□ -1.84
tF(GAA)DtF(GAA)D OYE2Q03558 400 aaKnown RBP3.54□□□□□ -1.84
tF(GAA)DtF(GAA)D NOC3Q07896 663 aaPredicted RBP3.54□□□□□ -1.84
tF(GAA)DtF(GAA)D ESC8Q08119 714 aa3.54□□□□□ -1.84
tF(GAA)DtF(GAA)D PCD1Q12524 340 aa3.54□□□□□ -1.84
tF(GAA)DtF(GAA)D MYO1P08964 1928 aa3.53□□□□□ -1.84
tF(GAA)DtF(GAA)D PGK1P00560 416 aaKnown RBP3.53□□□□□ -1.84
tF(GAA)DtF(GAA)D CDC16P09798 840 aa3.53□□□□□ -1.84
tF(GAA)DtF(GAA)D PDE1P22434 369 aa3.53□□□□□ -1.84
tF(GAA)DtF(GAA)D PEP3P27801 918 aa3.53□□□□□ -1.84
tF(GAA)DtF(GAA)D MRPL7P36519 292 aa3.53□□□□□ -1.84
tF(GAA)DtF(GAA)D AAP1P37898 856 aaKnown RBP3.53□□□□□ -1.84
tF(GAA)DtF(GAA)D STB5P38699 743 aa3.53□□□□□ -1.84
tF(GAA)DtF(GAA)D YHR202WP38887 602 aa3.53□□□□□ -1.84
tF(GAA)DtF(GAA)D MMF1P40185 145 aaKnown RBP3.53□□□□□ -1.84
tF(GAA)DtF(GAA)D EPL1P43572 832 aa3.53□□□□□ -1.84
tF(GAA)DtF(GAA)D FAA4P47912 694 aaKnown RBP3.53□□□□□ -1.84
tF(GAA)DtF(GAA)D YOR022CQ12204 715 aa3.53□□□□□ -1.84
tF(GAA)DtF(GAA)D PKH2Q12236 1081 aaKnown RBP3.53□□□□□ -1.84
tF(GAA)DtF(GAA)D HIF1Q12373 385 aa3.53□□□□□ -1.84
tF(GAA)DtF(GAA)D SPE1P08432 466 aa3.52□□□□□ -1.85
tF(GAA)DtF(GAA)D TIF1P10081 395 aaKnown RBP3.52□□□□□ -1.85
tF(GAA)DtF(GAA)D MAS1P10507 462 aa3.52□□□□□ -1.85
tF(GAA)DtF(GAA)D CLN3P13365 580 aa3.52□□□□□ -1.85
tF(GAA)DtF(GAA)D MAK11P20484 414 aaKnown RBP3.52□□□□□ -1.85
tF(GAA)DtF(GAA)D ADE2P21264 571 aaKnown RBP3.52□□□□□ -1.85
tF(GAA)DtF(GAA)D GSY1P23337 708 aa3.52□□□□□ -1.85
tF(GAA)DtF(GAA)D SGF29P25554 259 aa3.52□□□□□ -1.85
tF(GAA)DtF(GAA)D EFT1P32324 842 aaKnown RBP3.52□□□□□ -1.85
tF(GAA)DtF(GAA)D RME1P32338 300 aaKnown RBP3.52□□□□□ -1.85
tF(GAA)DtF(GAA)D PGM1P33401 570 aaKnown RBP3.52□□□□□ -1.85
tF(GAA)DtF(GAA)D SAS3P34218 831 aa3.52□□□□□ -1.85
tF(GAA)DtF(GAA)D ATG19P35193 415 aa3.52□□□□□ -1.85
tF(GAA)DtF(GAA)D HEL1P36113 551 aa3.52□□□□□ -1.85
tF(GAA)DtF(GAA)D RXT2P38255 430 aa3.52□□□□□ -1.85
tF(GAA)DtF(GAA)D ULP2P40537 1034 aaPredicted RBP3.52□□□□□ -1.85
tF(GAA)DtF(GAA)D VID28P40547 921 aa3.52□□□□□ -1.85
tF(GAA)DtF(GAA)D CIT3P43635 486 aa3.52□□□□□ -1.85
tF(GAA)DtF(GAA)D DSE4P53753 1117 aa3.52□□□□□ -1.85
tF(GAA)DtF(GAA)D CNM67P53865 581 aaKnown RBP3.52□□□□□ -1.85
tF(GAA)DtF(GAA)D YDR090CQ03193 310 aa3.52□□□□□ -1.85
tF(GAA)DtF(GAA)D PML39Q03760 334 aa3.52□□□□□ -1.85
tF(GAA)DtF(GAA)D CSM3Q04659 317 aa3.52□□□□□ -1.85
tF(GAA)DtF(GAA)D PHM6Q05637 104 aa3.52□□□□□ -1.85
tF(GAA)DtF(GAA)D MRI1Q06489 411 aaKnown RBP3.52□□□□□ -1.85
tF(GAA)DtF(GAA)D YLH47Q06493 454 aa3.52□□□□□ -1.85
tF(GAA)DtF(GAA)D SMC5Q08204 1093 aa3.52□□□□□ -1.85
tF(GAA)DtF(GAA)D RPL40AP0CH08 128 aaKnown RBP3.51□□□□□ -1.85
tF(GAA)DtF(GAA)D RPL40BP0CH09 128 aaKnown RBP3.51□□□□□ -1.85
tF(GAA)DtF(GAA)D TPM1P17536 199 aaKnown RBP3.51□□□□□ -1.85
tF(GAA)DtF(GAA)D MCM3P24279 971 aaKnown RBP3.51□□□□□ -1.85
tF(GAA)DtF(GAA)D BUD2P33314 1104 aa3.51□□□□□ -1.85
tF(GAA)DtF(GAA)D ARP1P38696 384 aa3.51□□□□□ -1.85
tF(GAA)DtF(GAA)D GAA1P39012 614 aa3.51□□□□□ -1.85
tF(GAA)DtF(GAA)D CCT3P39077 534 aaKnown RBP3.51□□□□□ -1.85
tF(GAA)DtF(GAA)D GPD2P41911 440 aaKnown RBP3.51□□□□□ -1.85
tF(GAA)DtF(GAA)D AVT1P47082 602 aa3.51□□□□□ -1.85
tF(GAA)DtF(GAA)D TAM41P53230 385 aa3.51□□□□□ -1.85
tF(GAA)DtF(GAA)D ARP5P53946 755 aa3.51□□□□□ -1.85
tF(GAA)DtF(GAA)D GDE1Q02979 1223 aa3.51□□□□□ -1.85
tF(GAA)DtF(GAA)D DOT1Q04089 582 aaKnown RBP3.51□□□□□ -1.85
tF(GAA)DtF(GAA)D YML083CQ04526 418 aa3.51□□□□□ -1.85
tF(GAA)DtF(GAA)D MFB1Q04922 465 aa3.51□□□□□ -1.85
tF(GAA)DtF(GAA)D PEX19Q07418 342 aa3.51□□□□□ -1.85
tF(GAA)DtF(GAA)D MRN1Q08925 612 aaKnown RBP RIP-Chip data3.51□□□□□ -1.85not detected
tF(GAA)DtF(GAA)D HFI1Q12060 488 aa3.51□□□□□ -1.85
Retrieved 100 of 5,963 RNA–protein pairs in 11.5 ms