RNA–Protein interactions for RNA: YPR047W

MSF1, Transcript of Mitochondrial phenylalanyl-tRNA synthetase, yeastyeast

Gene MSF1, Length 1,410 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSF1YPR047W INP52P50942 1183 aa11.57□□□□□ -0.56
MSF1YPR047W YLR407WQ06070 228 aa11.57□□□□□ -0.56
MSF1YPR047W SMC5Q08204 1093 aa11.57□□□□□ -0.56
MSF1YPR047W DAP1Q12091 152 aa11.57□□□□□ -0.56
MSF1YPR047W CDC6P09119 513 aa11.56□□□□□ -0.56
MSF1YPR047W VPS1P21576 704 aaKnown RBP11.56□□□□□ -0.56
MSF1YPR047W BUD2P33314 1104 aa11.56□□□□□ -0.56
MSF1YPR047W SLX1P38324 304 aa11.56□□□□□ -0.56
MSF1YPR047W EAF5P39995 279 aa11.56□□□□□ -0.56
MSF1YPR047W GCV2P49095 1034 aa11.56□□□□□ -0.56
MSF1YPR047W YNR014WP53719 212 aa11.56□□□□□ -0.56
MSF1YPR047W TRS120Q04183 1289 aa11.56□□□□□ -0.56
MSF1YPR047W SLK19Q08581 821 aaKnown RBP11.56□□□□□ -0.56
MSF1YPR047W NCR1Q12200 1170 aa11.56□□□□□ -0.56
MSF1YPR047W HIF1Q12373 385 aa11.56□□□□□ -0.56
MSF1YPR047W ASF1P32447 279 aa11.55□□□□□ -0.56
MSF1YPR047W ATG32P40458 529 aa11.55□□□□□ -0.56
MSF1YPR047W YNL034WP53963 612 aa11.55□□□□□ -0.56
MSF1YPR047W YNL018CP53976 612 aa11.55□□□□□ -0.56
MSF1YPR047W COQ9Q05779 260 aa11.55□□□□□ -0.56
MSF1YPR047W MMR1Q06324 491 aa11.55□□□□□ -0.56
MSF1YPR047W HFI1Q12060 488 aa11.55□□□□□ -0.56
MSF1YPR047W YHL017WP38745 532 aa11.54□□□□□ -0.56
MSF1YPR047W STT3P39007 718 aaKnown RBP11.54□□□□□ -0.56
MSF1YPR047W BUD6P41697 788 aa11.54□□□□□ -0.56
MSF1YPR047W OYE3P41816 400 aaPredicted RBP11.54□□□□□ -0.56
MSF1YPR047W YLR455WQ06188 304 aa11.54□□□□□ -0.56
MSF1YPR047W TIF1P10081 395 aaKnown RBP11.53□□□□□ -0.56
MSF1YPR047W PRP22P24384 1145 aaKnown RBP11.53□□□□□ -0.56
MSF1YPR047W PNG1Q02890 363 aa11.53□□□□□ -0.56
MSF1YPR047W SRD1P09007 221 aa11.52□□□□□ -0.56
MSF1YPR047W RNR2P09938 399 aaKnown RBP11.52□□□□□ -0.56
MSF1YPR047W WHI2P12611 486 aa11.52□□□□□ -0.56
MSF1YPR047W SYN8P31377 255 aa11.52□□□□□ -0.56
MSF1YPR047W APN2P38207 520 aa11.52□□□□□ -0.56
MSF1YPR047W JJJ3P47138 172 aa11.52□□□□□ -0.56
MSF1YPR047W ROD1Q02805 837 aa11.52□□□□□ -0.56
MSF1YPR047W YLH47Q06493 454 aa11.52□□□□□ -0.56
MSF1YPR047W TIP41Q12199 356 aa11.52□□□□□ -0.56
MSF1YPR047W PRC1P00729 532 aa11.52□□□□□ -0.57
MSF1YPR047W HSP82P02829 709 aaKnown RBP11.52□□□□□ -0.57
MSF1YPR047W BUD16P39988 312 aa11.52□□□□□ -0.57
MSF1YPR047W FYV10P40492 516 aa11.52□□□□□ -0.57
MSF1YPR047W YNL134CP53912 376 aaKnown RBP11.52□□□□□ -0.57
MSF1YPR047W SPO71Q03868 1245 aa11.52□□□□□ -0.57
MSF1YPR047W PCD1Q12524 340 aa11.52□□□□□ -0.57
MSF1YPR047W STB5P38699 743 aa11.51□□□□□ -0.57
MSF1YPR047W ENT3P47160 408 aa11.51□□□□□ -0.57
MSF1YPR047W PSK2Q08217 1101 aa11.51□□□□□ -0.57
MSF1YPR047W GET3Q12154 354 aaKnown RBP11.51□□□□□ -0.57
MSF1YPR047W TFC8Q12308 588 aa11.51□□□□□ -0.57
MSF1YPR047W ADE2P21264 571 aaKnown RBP11.5□□□□□ -0.57
MSF1YPR047W ATG19P35193 415 aa11.5□□□□□ -0.57
MSF1YPR047W RDH54P38086 958 aa11.5□□□□□ -0.57
MSF1YPR047W UBX7P38349 436 aa11.5□□□□□ -0.57
MSF1YPR047W YHL026CP38740 315 aa11.5□□□□□ -0.57
MSF1YPR047W FAF1P40546 346 aaPredicted RBP11.5□□□□□ -0.57
MSF1YPR047W CTF18P49956 741 aa11.5□□□□□ -0.57
MSF1YPR047W ALT2P52892 507 aa11.5□□□□□ -0.57
MSF1YPR047W PGA2P53903 129 aa11.5□□□□□ -0.57
MSF1YPR047W RLF2Q12495 606 aa11.5□□□□□ -0.57
MSF1YPR047W SMC6Q12749 1114 aa11.5□□□□□ -0.57
MSF1YPR047W YAP1801P38856 637 aa11.49□□□□□ -0.57
MSF1YPR047W ESL1P40456 1118 aa11.49□□□□□ -0.57
MSF1YPR047W ULP2P40537 1034 aaPredicted RBP11.49□□□□□ -0.57
MSF1YPR047W TPO2P53283 614 aa11.49□□□□□ -0.57
MSF1YPR047W MAP1Q01662 387 aaKnown RBP RIP-Chip data11.49□□□□□ -0.57not detected
MSF1YPR047W NOC3Q07896 663 aaPredicted RBP11.49□□□□□ -0.57
MSF1YPR047W NBL1Q3E7Y6 73 aa11.49□□□□□ -0.57
MSF1YPR047W TCP1P12612 559 aaKnown RBP11.48□□□□□ -0.57
MSF1YPR047W RPN3P40016 523 aaKnown RBP11.48□□□□□ -0.57
MSF1YPR047W SDA1P53313 767 aaKnown RBP11.48□□□□□ -0.57
MSF1YPR047W YOR296WQ08748 1289 aa11.48□□□□□ -0.57
MSF1YPR047W DCS2Q12123 353 aa11.48□□□□□ -0.57
MSF1YPR047W TUF1P02992 437 aaKnown RBP11.47□□□□□ -0.57
MSF1YPR047W ADK2P26364 225 aa11.47□□□□□ -0.57
MSF1YPR047W TMT1P32643 299 aa11.47□□□□□ -0.57
MSF1YPR047W MRPL7P36519 292 aa11.47□□□□□ -0.57
MSF1YPR047W ROG3P43602 733 aa11.47□□□□□ -0.57
MSF1YPR047W FUS2Q05670 677 aa11.47□□□□□ -0.57
MSF1YPR047W LAM5P43560 674 aa11.46□□□□□ -0.57
MSF1YPR047W AVT1P47082 602 aa11.46□□□□□ -0.57
MSF1YPR047W YGR153WP48238 217 aa11.46□□□□□ -0.57
MSF1YPR047W DOT1Q04089 582 aaKnown RBP11.46□□□□□ -0.57
MSF1YPR047W LCD1Q04377 747 aa11.46□□□□□ -0.57
MSF1YPR047W RFS1P38234 210 aaKnown RBP11.45□□□□□ -0.58
MSF1YPR047W YFL052WP43551 465 aa11.45□□□□□ -0.58
MSF1YPR047W NCS2P53923 493 aaPredicted RBP11.45□□□□□ -0.58
MSF1YPR047W EIS1Q05050 843 aaKnown RBP11.45□□□□□ -0.58
MSF1YPR047W FRS2P15625 503 aaKnown RBP11.44□□□□□ -0.58
MSF1YPR047W ALG1P16661 449 aa11.44□□□□□ -0.58
MSF1YPR047W VID30P53076 958 aa11.44□□□□□ -0.58
MSF1YPR047W YGL081WP53156 320 aa11.44□□□□□ -0.58
MSF1YPR047W CBK1P53894 756 aa11.44□□□□□ -0.58
MSF1YPR047W ELG1Q12050 791 aa11.44□□□□□ -0.58
MSF1YPR047W DPH2P32461 534 aa11.43□□□□□ -0.58
MSF1YPR047W CSE2P33308 149 aa11.43□□□□□ -0.58
MSF1YPR047W SIP3P38717 1229 aa11.43□□□□□ -0.58
MSF1YPR047W RTT102P53330 157 aa11.43□□□□□ -0.58
MSF1YPR047W RTC4P53850 401 aa11.43□□□□□ -0.58
Retrieved 100 of 5,963 RNA–protein pairs in 8.1 ms