RNA–Protein interactions for RNA: YPL139C

UME1, Transcript of Component of both the Rpd3S and Rpd3L histone deacetylase complexes, yeastyeast

Gene UME1, Length 1,383 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UME1YPL139C RPC31P17890 251 aa8.21□□□□□ -1.1
UME1YPL139C PWP2P25635 923 aaKnown RBP8.21□□□□□ -1.1
UME1YPL139C CLB5P30283 435 aa8.21□□□□□ -1.1
UME1YPL139C DUR3P33413 735 aa8.21□□□□□ -1.1
UME1YPL139C GPD2P41911 440 aaKnown RBP8.21□□□□□ -1.1
UME1YPL139C SGM1P47166 707 aa8.21□□□□□ -1.1
UME1YPL139C MSC2Q03455 724 aa8.21□□□□□ -1.1
UME1YPL139C YLL058WQ12198 575 aa8.21□□□□□ -1.1
UME1YPL139C ILV1P00927 576 aaKnown RBP8.2□□□□□ -1.1
UME1YPL139C ORC6P38826 435 aa8.2□□□□□ -1.1
UME1YPL139C BNI5P53890 448 aaKnown RBP8.2□□□□□ -1.1
UME1YPL139C GPI13Q07830 1017 aa8.2□□□□□ -1.1
UME1YPL139C UBR2Q07963 1872 aa8.2□□□□□ -1.1
UME1YPL139C ATG32P40458 529 aa8.19□□□□□ -1.1
UME1YPL139C FOL2P51601 243 aaKnown RBP8.19□□□□□ -1.1
UME1YPL139C DSE4P53753 1117 aa8.19□□□□□ -1.1
UME1YPL139C CRD1Q07560 283 aa8.19□□□□□ -1.1
UME1YPL139C DCS2Q12123 353 aa8.19□□□□□ -1.1
UME1YPL139C SES1P07284 462 aaKnown RBP8.18□□□□□ -1.1
UME1YPL139C RNR2P09938 399 aaKnown RBP8.18□□□□□ -1.1
UME1YPL139C SUP45P12385 437 aaKnown RBP8.18□□□□□ -1.1
UME1YPL139C TVP38P36164 337 aa8.18□□□□□ -1.1
UME1YPL139C RET3P53600 189 aa8.18□□□□□ -1.1
UME1YPL139C NAF1P53919 492 aaKnown RBP8.18□□□□□ -1.1
UME1YPL139C TRS120Q04183 1289 aa8.18□□□□□ -1.1
UME1YPL139C GYP1Q08484 637 aa8.18□□□□□ -1.1
UME1YPL139C PGK1P00560 416 aaKnown RBP8.17□□□□□ -1.1
UME1YPL139C HEM1P09950 548 aaPredicted RBP8.17□□□□□ -1.1
UME1YPL139C SNA3P14359 133 aa8.17□□□□□ -1.1
UME1YPL139C CBP3P21560 335 aa8.17□□□□□ -1.1
UME1YPL139C RAM1P22007 431 aa8.17□□□□□ -1.1
UME1YPL139C SUV3P32580 737 aa8.17□□□□□ -1.1
UME1YPL139C OPY1P38271 328 aa8.17□□□□□ -1.1
UME1YPL139C STT3P39007 718 aaKnown RBP8.17□□□□□ -1.1
UME1YPL139C ULP2P40537 1034 aaPredicted RBP8.17□□□□□ -1.1
UME1YPL139C GET3Q12154 354 aaKnown RBP8.17□□□□□ -1.1
UME1YPL139C CPA2P03965 1118 aaKnown RBP8.16□□□□□ -1.1
UME1YPL139C SMY2P32909 740 aaKnown RBP8.16□□□□□ -1.1
UME1YPL139C SIS2P36024 562 aa8.16□□□□□ -1.1
UME1YPL139C NPA3P47122 385 aa8.16□□□□□ -1.1
UME1YPL139C YGR153WP48238 217 aa8.16□□□□□ -1.1
UME1YPL139C RLF2Q12495 606 aa8.16□□□□□ -1.1
UME1YPL139C PTC5Q12511 572 aa8.16□□□□□ -1.1
UME1YPL139C HSP82P02829 709 aaKnown RBP8.15□□□□□ -1.1
UME1YPL139C DED1P06634 604 aaKnown RBP8.15□□□□□ -1.1
UME1YPL139C PRP22P24384 1145 aaKnown RBP8.15□□□□□ -1.1
UME1YPL139C SRO9P25567 434 aaKnown RBP8.15□□□□□ -1.1
UME1YPL139C IRE1P32361 1115 aa8.15□□□□□ -1.1
UME1YPL139C SAS3P34218 831 aa8.15□□□□□ -1.1
UME1YPL139C YHL017WP38745 532 aa8.15□□□□□ -1.1
UME1YPL139C YEL025CP39991 1188 aa8.15□□□□□ -1.1
UME1YPL139C HMF1P40037 129 aaKnown RBP8.15□□□□□ -1.1
UME1YPL139C BUD6P41697 788 aa8.15□□□□□ -1.1
UME1YPL139C DMA2P53924 522 aa8.15□□□□□ -1.1
UME1YPL139C MFM1Q02783 413 aa8.15□□□□□ -1.1
UME1YPL139C EAR1Q03212 550 aa8.15□□□□□ -1.1
UME1YPL139C PHM6Q05637 104 aa8.15□□□□□ -1.1
UME1YPL139C RIF1P29539 1916 aa8.15□□□□□ -1.1
UME1YPL139C CDC48P25694 835 aaKnown RBP8.14□□□□□ -1.11
UME1YPL139C BRL1P38770 471 aa8.14□□□□□ -1.11
UME1YPL139C PSP2P50109 593 aaKnown RBP8.14□□□□□ -1.11
UME1YPL139C VPS20Q04272 221 aa8.14□□□□□ -1.11
UME1YPL139C SLK19Q08581 821 aaKnown RBP8.14□□□□□ -1.11
UME1YPL139C CLN3P13365 580 aa8.13□□□□□ -1.11
UME1YPL139C THR4P16120 514 aaKnown RBP8.13□□□□□ -1.11
UME1YPL139C GSY1P23337 708 aa8.13□□□□□ -1.11
UME1YPL139C FIS1P40515 155 aa8.13□□□□□ -1.11
UME1YPL139C ZPR1P53303 486 aaKnown RBP8.13□□□□□ -1.11
UME1YPL139C RPL19AP0CX82 189 aaKnown RBP8.12□□□□□ -1.11
UME1YPL139C RPL19BP0CX83 189 aaPredicted RBP8.12□□□□□ -1.11
UME1YPL139C PGM1P33401 570 aaKnown RBP8.12□□□□□ -1.11
UME1YPL139C RFC5P38251 354 aa8.12□□□□□ -1.11
UME1YPL139C PGA2P53903 129 aa8.12□□□□□ -1.11
UME1YPL139C CUS1Q02554 436 aaPredicted RBP8.12□□□□□ -1.11
UME1YPL139C ADY4Q05955 493 aa8.12□□□□□ -1.11
UME1YPL139C ELG1Q12050 791 aa8.12□□□□□ -1.11
UME1YPL139C YPL150WQ12152 901 aa8.12□□□□□ -1.11
UME1YPL139C CEX1Q12453 761 aa8.12□□□□□ -1.11
UME1YPL139C TUF1P02992 437 aaKnown RBP8.11□□□□□ -1.11
UME1YPL139C YEL076C-AP0CX16 216 aa8.11□□□□□ -1.11
UME1YPL139C YLR464WP0CX17 216 aa8.11□□□□□ -1.11
UME1YPL139C MBR1P23493 339 aa8.11□□□□□ -1.11
UME1YPL139C URA1P28272 314 aaPredicted RBP8.11□□□□□ -1.11
UME1YPL139C RME1P32338 300 aaKnown RBP8.11□□□□□ -1.11
UME1YPL139C POA1P38218 177 aa8.11□□□□□ -1.11
UME1YPL139C ERC1P38767 581 aa8.11□□□□□ -1.11
UME1YPL139C YEL076CP39971 216 aa8.11□□□□□ -1.11
UME1YPL139C JHD1P40034 492 aa8.11□□□□□ -1.11
UME1YPL139C HUL5P53119 910 aa8.11□□□□□ -1.11
UME1YPL139C YML020WQ03722 664 aa8.11□□□□□ -1.11
UME1YPL139C CSM3Q04659 317 aa8.11□□□□□ -1.11
UME1YPL139C SVF1Q05515 481 aa8.11□□□□□ -1.11
UME1YPL139C COQ9Q05779 260 aa8.11□□□□□ -1.11
UME1YPL139C UBC1P21734 215 aaKnown RBP8.1□□□□□ -1.11
UME1YPL139C GBP2P25555 427 aaKnown RBP RIP-Chip data8.1□□□□□ -1.11not detected
UME1YPL139C GAR1P28007 205 aaKnown RBP8.1□□□□□ -1.11
UME1YPL139C EFT1P32324 842 aaKnown RBP8.1□□□□□ -1.11
UME1YPL139C MSS51P32335 436 aa8.1□□□□□ -1.11
UME1YPL139C MSC7P38694 644 aa8.1□□□□□ -1.11
UME1YPL139C PIH1P38768 344 aa8.1□□□□□ -1.11
Retrieved 100 of 5,963 RNA–protein pairs in 71.1 ms