RNA–Protein interactions for RNA: YPL084W

BRO1, Transcript of Cytoplasmic class E vacuolar protein sorting (VPS) factor, yeastyeast

Gene BRO1, Length 2,535 nt, Biotype protein coding, Subcellular localisation Cellular bud .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
BRO1YPL084W PGM1P33401 570 aaKnown RBP3.31□□□□□ -1.88
BRO1YPL084W BAP2P38084 609 aa3.31□□□□□ -1.88
BRO1YPL084W YDL124WQ07551 312 aaKnown RBP3.31□□□□□ -1.88
BRO1YPL084W HBN1Q96VH4 193 aa3.31□□□□□ -1.88
BRO1YPL084W SNF5P18480 905 aa3.3□□□□□ -1.88
BRO1YPL084W SLA2P33338 968 aa3.3□□□□□ -1.88
BRO1YPL084W SPC42P36094 363 aa3.3□□□□□ -1.88
BRO1YPL084W BET3P36149 193 aa3.3□□□□□ -1.88
BRO1YPL084W GUS1P46655 708 aaKnown RBP RIP-Chip data3.3□□□□□ -1.88not detected
BRO1YPL084W RTA1P53047 317 aa3.3□□□□□ -1.88
BRO1YPL084W TPO2P53283 614 aa3.3□□□□□ -1.88
BRO1YPL084W YLR125WQ12138 136 aa3.3□□□□□ -1.88
BRO1YPL084W YLR122CQ12312 125 aa3.3□□□□□ -1.88
BRO1YPL084W THI4P32318 326 aa3.3□□□□□ -1.88
BRO1YPL084W RRP14P36080 434 aaKnown RBP3.3□□□□□ -1.88
BRO1YPL084W CCZ1P38273 704 aa3.3□□□□□ -1.88
BRO1YPL084W SAH1P39954 449 aaKnown RBP3.3□□□□□ -1.88
BRO1YPL084W OYE3P41816 400 aaPredicted RBP3.3□□□□□ -1.88
BRO1YPL084W YGR130CP53278 816 aa3.3□□□□□ -1.88
BRO1YPL084W NPL3Q01560 414 aaKnown RBP RIP-Chip data3.3□□□□□ -1.88not detected
BRO1YPL084W SRP1Q02821 542 aaKnown RBP3.3□□□□□ -1.88
BRO1YPL084W RGA2Q06407 1009 aa3.3□□□□□ -1.88
BRO1YPL084W TRE1Q08919 783 aa3.3□□□□□ -1.88
BRO1YPL084W YPR071WQ12346 211 aa3.3□□□□□ -1.88
BRO1YPL084W TOP3P13099 656 aa3.29□□□□□ -1.88
BRO1YPL084W MSB1P21339 1137 aaKnown RBP3.29□□□□□ -1.88
BRO1YPL084W PRO1P32264 428 aa3.29□□□□□ -1.88
BRO1YPL084W MDL2P33311 773 aa3.29□□□□□ -1.88
BRO1YPL084W KAE1P36132 386 aa3.29□□□□□ -1.88
BRO1YPL084W RSB1Q08417 382 aa3.29□□□□□ -1.88
BRO1YPL084W ADE8P04161 214 aa3.29□□□□□ -1.88
BRO1YPL084W YKL151CP36059 337 aa3.29□□□□□ -1.88
BRO1YPL084W YRO2P38079 344 aa3.29□□□□□ -1.88
BRO1YPL084W PIK1P39104 1066 aa3.29□□□□□ -1.88
BRO1YPL084W NBA1Q08229 501 aaKnown RBP3.29□□□□□ -1.88
BRO1YPL084W BI4P03879 638 aa3.28□□□□□ -1.88
BRO1YPL084W TOM70P07213 617 aaKnown RBP3.28□□□□□ -1.88
BRO1YPL084W SRO9P25567 434 aaKnown RBP3.28□□□□□ -1.88
BRO1YPL084W PTC7P38797 343 aa3.28□□□□□ -1.88
BRO1YPL084W PEX7P39108 375 aa3.28□□□□□ -1.88
BRO1YPL084W DOS2P54858 310 aa3.28□□□□□ -1.88
BRO1YPL084W HRQ1Q05549 1077 aa3.28□□□□□ -1.88
BRO1YPL084W NSI1Q12457 570 aa3.28□□□□□ -1.88
BRO1YPL084W THS1P04801 734 aaKnown RBP3.28□□□□□ -1.88
BRO1YPL084W AIM26P32858 118 aa3.28□□□□□ -1.88
BRO1YPL084W SIT1P39980 628 aa3.28□□□□□ -1.88
BRO1YPL084W GTS1P40956 396 aa3.28□□□□□ -1.88
BRO1YPL084W HSV2P50079 448 aaPredicted RBP3.28□□□□□ -1.88
BRO1YPL084W RSC58Q07979 502 aa3.28□□□□□ -1.88
BRO1YPL084W MSD1P15179 658 aaKnown RBP3.27□□□□□ -1.89
BRO1YPL084W CDC12P32468 407 aaKnown RBP3.27□□□□□ -1.89
BRO1YPL084W DOM34P33309 386 aa3.27□□□□□ -1.89
BRO1YPL084W CYC7P00045 113 aa3.27□□□□□ -1.89
BRO1YPL084W GCD1P09032 578 aaPredicted RBP3.27□□□□□ -1.89
BRO1YPL084W MNN1P39106 762 aa3.27□□□□□ -1.89
BRO1YPL084W UBP6P43593 499 aaKnown RBP3.27□□□□□ -1.89
BRO1YPL084W CCT8P47079 568 aaKnown RBP3.27□□□□□ -1.89
BRO1YPL084W SSY1Q03770 852 aa3.27□□□□□ -1.89
BRO1YPL084W LCD1Q04377 747 aa3.27□□□□□ -1.89
BRO1YPL084W PET10P36139 283 aa3.26□□□□□ -1.89
BRO1YPL084W ERT1P38140 529 aa3.26□□□□□ -1.89
BRO1YPL084W MTC3P53077 123 aa3.26□□□□□ -1.89
BRO1YPL084W POB3Q04636 552 aaKnown RBP3.26□□□□□ -1.89
BRO1YPL084W MDM38Q08179 573 aa3.26□□□□□ -1.89
BRO1YPL084W SVS1Q12254 260 aa3.26□□□□□ -1.89
BRO1YPL084W TRP3P00937 484 aa3.26□□□□□ -1.89
BRO1YPL084W NPP1P25353 742 aa3.26□□□□□ -1.89
BRO1YPL084W AFR1P33304 620 aa3.26□□□□□ -1.89
BRO1YPL084W MAP1Q01662 387 aaKnown RBP RIP-Chip data3.26□□□□□ -1.89not detected
BRO1YPL084W ACE2P21192 770 aa3.25□□□□□ -1.89
BRO1YPL084W ADP1P25371 1049 aa3.25□□□□□ -1.89
BRO1YPL084W FPR3P38911 411 aaKnown RBP3.25□□□□□ -1.89
BRO1YPL084W GDH3P39708 457 aa3.25□□□□□ -1.89
BRO1YPL084W TOK1P40310 691 aa3.25□□□□□ -1.89
BRO1YPL084W SPS1P08458 490 aa3.25□□□□□ -1.89
BRO1YPL084W MSH2P25847 964 aa3.25□□□□□ -1.89
BRO1YPL084W SCT1P32784 759 aa3.25□□□□□ -1.89
BRO1YPL084W REC104P33323 182 aa3.25□□□□□ -1.89
BRO1YPL084W RFC5P38251 354 aa3.25□□□□□ -1.89
BRO1YPL084W RRT14P40470 206 aa3.25□□□□□ -1.89
BRO1YPL084W SDH1Q00711 640 aa3.25□□□□□ -1.89
BRO1YPL084W SRT1Q03175 343 aa3.25□□□□□ -1.89
BRO1YPL084W BUL2Q03758 920 aaKnown RBP3.25□□□□□ -1.89
BRO1YPL084W YLL058WQ12198 575 aa3.25□□□□□ -1.89
BRO1YPL084W PHR1P05066 565 aaKnown RBP RIP-Chip data3.24□□□□□ -1.89 RIP-Chip
BRO1YPL084W TSL1P38427 1098 aaKnown RBP3.24□□□□□ -1.89
BRO1YPL084W GIC1P38785 314 aa3.24□□□□□ -1.89
BRO1YPL084W MAL11P53048 616 aa3.24□□□□□ -1.89
BRO1YPL084W ATG13Q06628 738 aa3.24□□□□□ -1.89
BRO1YPL084W MED7Q08278 222 aa3.24□□□□□ -1.89
BRO1YPL084W NPP2P39997 493 aa3.24□□□□□ -1.89
BRO1YPL084W SEC26P41810 973 aaKnown RBP3.24□□□□□ -1.89
BRO1YPL084W LSB3P43603 459 aaKnown RBP3.24□□□□□ -1.89
BRO1YPL084W CCM1P48237 864 aaPredicted RBP3.24□□□□□ -1.89
BRO1YPL084W HFM1P51979 1187 aa3.24□□□□□ -1.89
BRO1YPL084W ALG2P43636 503 aa3.23□□□□□ -1.89
BRO1YPL084W GYP7P48365 746 aa3.23□□□□□ -1.89
BRO1YPL084W SFB2P53953 876 aa3.23□□□□□ -1.89
BRO1YPL084W MTC5Q03897 1148 aa3.23□□□□□ -1.89
BRO1YPL084W YPR196WQ06595 470 aa3.23□□□□□ -1.89
Retrieved 100 of 5,963 RNA–protein pairs in 10.6 ms