RNA–Protein interactions for RNA: YOR106W

VAM3, Transcript of Syntaxin-like vacuolar t-SNARE, yeastyeast

Gene VAM3, Length 852 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VAM3YOR106W OPI10Q08202 246 aa6.93□□□□□ -1.3
VAM3YOR106W RPS13P05756 151 aaKnown RBP6.92□□□□□ -1.3
VAM3YOR106W CMP2P14747 604 aa6.92□□□□□ -1.3
VAM3YOR106W PRI2P20457 528 aa6.92□□□□□ -1.3
VAM3YOR106W AGP1P25376 633 aa6.92□□□□□ -1.3
VAM3YOR106W SIP5P40210 489 aaKnown RBP6.92□□□□□ -1.3
VAM3YOR106W RRT14P40470 206 aa6.92□□□□□ -1.3
VAM3YOR106W SOD2P00447 233 aa6.91□□□□□ -1.3
VAM3YOR106W ACE2P21192 770 aa6.91□□□□□ -1.3
VAM3YOR106W LAM1P38851 1228 aa6.9□□□□□ -1.3
VAM3YOR106W YPL277CQ08989 487 aa6.9□□□□□ -1.3
VAM3YOR106W ROT1Q03691 256 aa6.89□□□□□ -1.31
VAM3YOR106W RIB2Q12362 591 aaKnown RBP6.89□□□□□ -1.31
VAM3YOR106W GAL10P04397 699 aa6.88□□□□□ -1.31
VAM3YOR106W TOD6P34219 525 aa6.88□□□□□ -1.31
VAM3YOR106W SIZ1Q04195 904 aa6.88□□□□□ -1.31
VAM3YOR106W VTS1Q08831 523 aaKnown RBP RIP-Chip data6.88□□□□□ -1.31not detected
VAM3YOR106W THI80P35202 319 aa6.87□□□□□ -1.31
VAM3YOR106W YKL069WP36088 180 aa6.87□□□□□ -1.31
VAM3YOR106W MEF2P39677 819 aa6.87□□□□□ -1.31
VAM3YOR106W SPT20P50875 604 aa6.87□□□□□ -1.31
VAM3YOR106W SHE9Q04172 456 aa6.87□□□□□ -1.31
VAM3YOR106W VBA5P36172 582 aa6.86□□□□□ -1.31
VAM3YOR106W MBP1P39678 833 aa6.86□□□□□ -1.31
VAM3YOR106W HFM1P51979 1187 aa6.86□□□□□ -1.31
VAM3YOR106W PBP1P53297 722 aaKnown RBP6.86□□□□□ -1.31
VAM3YOR106W GCN5Q03330 439 aa6.86□□□□□ -1.31
VAM3YOR106W SAH1P39954 449 aaKnown RBP6.85□□□□□ -1.31
VAM3YOR106W SRP1Q02821 542 aaKnown RBP6.85□□□□□ -1.31
VAM3YOR106W MSC2Q03455 724 aa6.85□□□□□ -1.31
VAM3YOR106W YDR132CQ03900 495 aa6.85□□□□□ -1.31
VAM3YOR106W TDA5Q06417 326 aaKnown RBP6.85□□□□□ -1.31
VAM3YOR106W WRS1Q12109 432 aaKnown RBP6.85□□□□□ -1.31
VAM3YOR106W YLL058WQ12198 575 aa6.85□□□□□ -1.31
VAM3YOR106W OSW2Q12202 724 aa6.85□□□□□ -1.31
VAM3YOR106W SRM1P21827 482 aa6.84□□□□□ -1.31
VAM3YOR106W MRP8P35719 219 aa6.84□□□□□ -1.31
VAM3YOR106W PLB2Q03674 706 aa6.84□□□□□ -1.31
VAM3YOR106W HRQ1Q05549 1077 aa6.84□□□□□ -1.31
VAM3YOR106W RXT3Q07458 294 aa6.83□□□□□ -1.32
VAM3YOR106W ESC8Q08119 714 aa6.83□□□□□ -1.32
VAM3YOR106W MDM38Q08179 573 aa6.83□□□□□ -1.32
VAM3YOR106W SPF1P39986 1215 aaKnown RBP6.82□□□□□ -1.32
VAM3YOR106W MTC3P53077 123 aa6.82□□□□□ -1.32
VAM3YOR106W GTF1P53260 183 aaPredicted RBP6.82□□□□□ -1.32
VAM3YOR106W DUS3Q06053 668 aaKnown RBP6.82□□□□□ -1.32
VAM3YOR106W YLR358CO13565 187 aa6.81□□□□□ -1.32
VAM3YOR106W YKL222CP35995 705 aa6.81□□□□□ -1.32
VAM3YOR106W YKL151CP36059 337 aa6.81□□□□□ -1.32
VAM3YOR106W GPB1Q08886 897 aa6.81□□□□□ -1.32
VAM3YOR106W ENA1P13587 1091 aa6.8□□□□□ -1.32
VAM3YOR106W PPH3P32345 308 aa6.8□□□□□ -1.32
VAM3YOR106W PBY1P38254 753 aa6.8□□□□□ -1.32
VAM3YOR106W IRR1P40541 1150 aa6.8□□□□□ -1.32
VAM3YOR106W TPO2P53283 614 aa6.8□□□□□ -1.32
VAM3YOR106W ENA2Q01896 1091 aa6.8□□□□□ -1.32
VAM3YOR106W SRT1Q03175 343 aa6.8□□□□□ -1.32
VAM3YOR106W DUS4Q06063 367 aa6.8□□□□□ -1.32
VAM3YOR106W YDR306CQ06640 478 aa6.8□□□□□ -1.32
VAM3YOR106W ENA5Q12691 1091 aa6.8□□□□□ -1.32
VAM3YOR106W CDC12P32468 407 aaKnown RBP6.79□□□□□ -1.32
VAM3YOR106W FLR1P38124 548 aa6.79□□□□□ -1.32
VAM3YOR106W YAP1801P38856 637 aa6.79□□□□□ -1.32
VAM3YOR106W ZRG8P40021 1076 aa6.79□□□□□ -1.32
VAM3YOR106W XYL2Q07993 356 aa6.79□□□□□ -1.32
VAM3YOR106W SSF2Q12153 453 aaPredicted RBP6.79□□□□□ -1.32
VAM3YOR106W PRE10P21242 288 aaKnown RBP RIP-Chip data6.78□□□□□ -1.32not detected
VAM3YOR106W FUN30P31380 1131 aa6.78□□□□□ -1.32
VAM3YOR106W DOM34P33309 386 aa6.78□□□□□ -1.32
VAM3YOR106W GIC1P38785 314 aa6.78□□□□□ -1.32
VAM3YOR106W ACK1Q07622 623 aaPredicted RBP6.78□□□□□ -1.32
VAM3YOR106W PRP9P19736 530 aaKnown RBP6.77□□□□□ -1.33
VAM3YOR106W YCR015CP25616 317 aa6.77□□□□□ -1.33
VAM3YOR106W AAR2P32357 355 aaPredicted RBP6.77□□□□□ -1.33
VAM3YOR106W MND2P40577 368 aa6.77□□□□□ -1.33
VAM3YOR106W GUS1P46655 708 aaKnown RBP RIP-Chip data6.77□□□□□ -1.33not detected
VAM3YOR106W GRX1P25373 110 aaKnown RBP6.76□□□□□ -1.33
VAM3YOR106W POA1P38218 177 aa6.76□□□□□ -1.33
VAM3YOR106W GIP4P39732 760 aa6.76□□□□□ -1.33
VAM3YOR106W GCV2P49095 1034 aa6.76□□□□□ -1.33
VAM3YOR106W EMC1P25574 760 aa6.75□□□□□ -1.33
VAM3YOR106W CDC20P26309 610 aa6.75□□□□□ -1.33
VAM3YOR106W STE5P32917 917 aa6.75□□□□□ -1.33
VAM3YOR106W ECM21P38167 1117 aaKnown RBP6.75□□□□□ -1.33
VAM3YOR106W YBR184WP38299 523 aa6.75□□□□□ -1.33
VAM3YOR106W TAF1P46677 1066 aa6.75□□□□□ -1.33
VAM3YOR106W YGR012WP53206 393 aa6.75□□□□□ -1.33
VAM3YOR106W NAN1Q02931 896 aaKnown RBP6.75□□□□□ -1.33
VAM3YOR106W CLU1Q03690 1277 aaKnown RBP6.75□□□□□ -1.33
VAM3YOR106W YAP6Q03935 383 aa6.75□□□□□ -1.33
VAM3YOR106W RPP2AP05319 106 aaKnown RBP6.74□□□□□ -1.33
VAM3YOR106W SRP101P32916 621 aa6.74□□□□□ -1.33
VAM3YOR106W TAT2P38967 592 aa6.74□□□□□ -1.33
VAM3YOR106W PSP2P50109 593 aaKnown RBP6.74□□□□□ -1.33
VAM3YOR106W YPR196WQ06595 470 aa6.74□□□□□ -1.33
VAM3YOR106W TPO1Q07824 586 aa6.74□□□□□ -1.33
VAM3YOR106W HMI1Q12039 706 aa6.74□□□□□ -1.33
VAM3YOR106W ADE8P04161 214 aa6.73□□□□□ -1.33
VAM3YOR106W CDC6P09119 513 aa6.73□□□□□ -1.33
VAM3YOR106W YER158CP40095 573 aa6.73□□□□□ -1.33
Retrieved 100 of 5,963 RNA–protein pairs in 11.9 ms