RNA–Protein interactions for RNA: YNL227C

JJJ1, Transcript of Co-chaperone that stimulates the ATPase activity of Ssa1p, yeast

Gene JJJ1, Length 1,773 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
JJJ1	YNL227C	BI4	P03879	638 aa		4.71	□□□□□ -1.66
JJJ1	YNL227C	THS1	P04801	734 aa	Known RBP	4.71	□□□□□ -1.66
JJJ1	YNL227C	CMP2	P14747	604 aa		4.71	□□□□□ -1.66
JJJ1	YNL227C	PAM1	P37304	830 aa	Known RBP	4.71	□□□□□ -1.66
JJJ1	YNL227C	ROT1	Q03691	256 aa		4.71	□□□□□ -1.66
JJJ1	YNL227C	OPI10	Q08202	246 aa		4.71	□□□□□ -1.66
JJJ1	YNL227C	HIR3	P47171	1648 aa		4.71	□□□□□ -1.66
JJJ1	YNL227C	RPS13	P05756	151 aa	Known RBP	4.7	□□□□□ -1.66
JJJ1	YNL227C	PRP6	P19735	899 aa	Predicted RBP	4.7	□□□□□ -1.66
JJJ1	YNL227C	SLA2	P33338	968 aa		4.7	□□□□□ -1.66
JJJ1	YNL227C	SIP5	P40210	489 aa	Known RBP	4.7	□□□□□ -1.66
JJJ1	YNL227C	YPL277C	Q08989	487 aa		4.7	□□□□□ -1.66
JJJ1	YNL227C	MON2	P48563	1636 aa	Predicted RBP	4.7	□□□□□ -1.66
JJJ1	YNL227C	LAM1	P38851	1228 aa		4.7	□□□□□ -1.66
JJJ1	YNL227C	RIM8	P53179	542 aa		4.7	□□□□□ -1.66
JJJ1	YNL227C	ATG13	Q06628	738 aa		4.7	□□□□□ -1.66
JJJ1	YNL227C	VTS1	Q08831	523 aa	Known RBP RIP-Chip data	4.7	□□□□□ -1.66	not detected
JJJ1	YNL227C	ACE2	P21192	770 aa		4.69	□□□□□ -1.66
JJJ1	YNL227C	AGP1	P25376	633 aa		4.69	□□□□□ -1.66
JJJ1	YNL227C	XRN1	P22147	1528 aa	Known RBP	4.69	□□□□□ -1.66
JJJ1	YNL227C	SOD2	P00447	233 aa		4.68	□□□□□ -1.66
JJJ1	YNL227C	GAL10	P04397	699 aa		4.68	□□□□□ -1.66
JJJ1	YNL227C	SBA1	P28707	216 aa	Known RBP	4.68	□□□□□ -1.66
JJJ1	YNL227C	TOD6	P34219	525 aa		4.68	□□□□□ -1.66
JJJ1	YNL227C	THI80	P35202	319 aa		4.68	□□□□□ -1.66
JJJ1	YNL227C	MEF2	P39677	819 aa		4.68	□□□□□ -1.66
JJJ1	YNL227C	MBP1	P39678	833 aa		4.68	□□□□□ -1.66
JJJ1	YNL227C	RRT14	P40470	206 aa		4.68	□□□□□ -1.66
JJJ1	YNL227C	SWR1	Q05471	1514 aa		4.68	□□□□□ -1.66
JJJ1	YNL227C	SPT20	P50875	604 aa		4.68	□□□□□ -1.66
JJJ1	YNL227C	NOP7	P53261	605 aa	Known RBP	4.68	□□□□□ -1.66
JJJ1	YNL227C	PLB2	Q03674	706 aa		4.68	□□□□□ -1.66
JJJ1	YNL227C	SRM1	P21827	482 aa		4.67	□□□□□ -1.66
JJJ1	YNL227C	YKL069W	P36088	180 aa		4.67	□□□□□ -1.66
JJJ1	YNL227C	VBA5	P36172	582 aa		4.67	□□□□□ -1.66
JJJ1	YNL227C	RIB2	Q12362	591 aa	Known RBP	4.67	□□□□□ -1.66
JJJ1	YNL227C	SAH1	P39954	449 aa	Known RBP	4.66	□□□□□ -1.66
JJJ1	YNL227C	HFM1	P51979	1187 aa		4.66	□□□□□ -1.66
JJJ1	YNL227C	GCN5	Q03330	439 aa		4.66	□□□□□ -1.66
JJJ1	YNL227C	GTF1	P53260	183 aa	Predicted RBP	4.65	□□□□□ -1.66
JJJ1	YNL227C	WRS1	Q12109	432 aa	Known RBP	4.65	□□□□□ -1.66
JJJ1	YNL227C	OSW2	Q12202	724 aa		4.65	□□□□□ -1.66
JJJ1	YNL227C	MTC3	P53077	123 aa		4.65	□□□□□ -1.67
JJJ1	YNL227C	PBP1	P53297	722 aa	Known RBP	4.65	□□□□□ -1.67
JJJ1	YNL227C	MSC2	Q03455	724 aa		4.65	□□□□□ -1.67
JJJ1	YNL227C	SHE9	Q04172	456 aa		4.65	□□□□□ -1.67
JJJ1	YNL227C	HRQ1	Q05549	1077 aa		4.65	□□□□□ -1.67
JJJ1	YNL227C	TDA5	Q06417	326 aa	Known RBP	4.65	□□□□□ -1.67
JJJ1	YNL227C	YKL151C	P36059	337 aa		4.64	□□□□□ -1.67
JJJ1	YNL227C	SRP1	Q02821	542 aa	Known RBP	4.64	□□□□□ -1.67
JJJ1	YNL227C	DUS3	Q06053	668 aa	Known RBP	4.64	□□□□□ -1.67
JJJ1	YNL227C	ESC8	Q08119	714 aa		4.64	□□□□□ -1.67
JJJ1	YNL227C	ENA1	P13587	1091 aa		4.63	□□□□□ -1.67
JJJ1	YNL227C	ENA2	Q01896	1091 aa		4.63	□□□□□ -1.67
JJJ1	YNL227C	YDR132C	Q03900	495 aa		4.63	□□□□□ -1.67
JJJ1	YNL227C	SIZ1	Q04195	904 aa		4.63	□□□□□ -1.67
JJJ1	YNL227C	RXT3	Q07458	294 aa		4.63	□□□□□ -1.67
JJJ1	YNL227C	MDM38	Q08179	573 aa		4.63	□□□□□ -1.67
JJJ1	YNL227C	ENA5	Q12691	1091 aa		4.63	□□□□□ -1.67
JJJ1	YNL227C	REV3	P14284	1504 aa		4.63	□□□□□ -1.67
JJJ1	YNL227C	YLR358C	O13565	187 aa		4.63	□□□□□ -1.67
JJJ1	YNL227C	MRP8	P35719	219 aa		4.63	□□□□□ -1.67
JJJ1	YNL227C	YKL222C	P35995	705 aa		4.63	□□□□□ -1.67
JJJ1	YNL227C	SPF1	P39986	1215 aa	Known RBP	4.63	□□□□□ -1.67
JJJ1	YNL227C	GCV2	P49095	1034 aa		4.63	□□□□□ -1.67
JJJ1	YNL227C	DUS4	Q06063	367 aa		4.63	□□□□□ -1.67
JJJ1	YNL227C	YDR306C	Q06640	478 aa		4.63	□□□□□ -1.67
JJJ1	YNL227C	XYL2	Q07993	356 aa		4.63	□□□□□ -1.67
JJJ1	YNL227C	GPB1	Q08886	897 aa		4.63	□□□□□ -1.67
JJJ1	YNL227C	ZRG8	P40021	1076 aa		4.62	□□□□□ -1.67
JJJ1	YNL227C	YLL058W	Q12198	575 aa		4.62	□□□□□ -1.67
JJJ1	YNL227C	PRE10	P21242	288 aa	Known RBP RIP-Chip data	4.61	□□□□□ -1.67	not detected
JJJ1	YNL227C	FLR1	P38124	548 aa		4.61	□□□□□ -1.67
JJJ1	YNL227C	PBY1	P38254	753 aa		4.61	□□□□□ -1.67
JJJ1	YNL227C	YAP1801	P38856	637 aa		4.61	□□□□□ -1.67
JJJ1	YNL227C	TAF1	P46677	1066 aa		4.61	□□□□□ -1.67
JJJ1	YNL227C	SRT1	Q03175	343 aa		4.61	□□□□□ -1.67
JJJ1	YNL227C	ACK1	Q07622	623 aa	Predicted RBP	4.61	□□□□□ -1.67
JJJ1	YNL227C	GRX1	P25373	110 aa	Known RBP	4.6	□□□□□ -1.67
JJJ1	YNL227C	PPH3	P32345	308 aa		4.6	□□□□□ -1.67
JJJ1	YNL227C	AAR2	P32357	355 aa	Predicted RBP	4.6	□□□□□ -1.67
JJJ1	YNL227C	YBR184W	P38299	523 aa		4.6	□□□□□ -1.67
JJJ1	YNL227C	GIP4	P39732	760 aa		4.6	□□□□□ -1.67
JJJ1	YNL227C	IRR1	P40541	1150 aa		4.6	□□□□□ -1.67
JJJ1	YNL227C	THO2	P53552	1597 aa	Known RBP	4.6	□□□□□ -1.67
JJJ1	YNL227C	GIC1	P38785	314 aa		4.6	□□□□□ -1.67
JJJ1	YNL227C	SIN3	P22579	1536 aa		4.59	□□□□□ -1.67
JJJ1	YNL227C	YCR015C	P25616	317 aa		4.59	□□□□□ -1.67
JJJ1	YNL227C	CDC20	P26309	610 aa		4.59	□□□□□ -1.67
JJJ1	YNL227C	FUN30	P31380	1131 aa		4.59	□□□□□ -1.67
JJJ1	YNL227C	CDC12	P32468	407 aa	Known RBP	4.59	□□□□□ -1.67
JJJ1	YNL227C	STE5	P32917	917 aa		4.59	□□□□□ -1.67
JJJ1	YNL227C	POA1	P38218	177 aa		4.59	□□□□□ -1.67
JJJ1	YNL227C	MND2	P40577	368 aa		4.59	□□□□□ -1.67
JJJ1	YNL227C	SSF2	Q12153	453 aa	Predicted RBP	4.59	□□□□□ -1.67
JJJ1	YNL227C	TAF2	P23255	1407 aa		4.59	□□□□□ -1.67
JJJ1	YNL227C	ADE8	P04161	214 aa		4.58	□□□□□ -1.68
JJJ1	YNL227C	EMC1	P25574	760 aa		4.58	□□□□□ -1.68
JJJ1	YNL227C	DOM34	P33309	386 aa		4.58	□□□□□ -1.68
JJJ1	YNL227C	ECM21	P38167	1117 aa	Known RBP	4.58	□□□□□ -1.68

Retrieved 100 of 5,963 RNA–protein pairs in 45.1 ms