RNA–Protein interactions for RNA: YNL132W

KRE33, Transcript of Protein required for biogenesis of the small ribosomal subunit, yeast

Gene KRE33, Length 3,171 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
KRE33	YNL132W	MDM36	Q06820	579 aa		2.68	□□□□□ -1.98
KRE33	YNL132W	YPR097W	Q06839	1073 aa		2.68	□□□□□ -1.98
KRE33	YNL132W	THI73	Q07904	523 aa		2.68	□□□□□ -1.98
KRE33	YNL132W	RSC58	Q07979	502 aa		2.68	□□□□□ -1.98
KRE33	YNL132W	ETT1	Q08421	412 aa	Known RBP	2.68	□□□□□ -1.98
KRE33	YNL132W	TRE2	Q08693	809 aa		2.68	□□□□□ -1.98
KRE33	YNL132W	TRS33	Q99394	268 aa		2.68	□□□□□ -1.98
KRE33	YNL132W	PRT1	P06103	763 aa	Known RBP	2.68	□□□□□ -1.98
KRE33	YNL132W	PHO4	P07270	312 aa	Known RBP	2.68	□□□□□ -1.98
KRE33	YNL132W	PRP5	P21372	849 aa	Predicted RBP	2.68	□□□□□ -1.98
KRE33	YNL132W	NAM7	P30771	971 aa	Known RBP	2.68	□□□□□ -1.98
KRE33	YNL132W	PLC1	P32383	869 aa		2.68	□□□□□ -1.98
KRE33	YNL132W	ORC2	P32833	620 aa		2.68	□□□□□ -1.98
KRE33	YNL132W	SPF1	P39986	1215 aa	Known RBP	2.68	□□□□□ -1.98
KRE33	YNL132W	PCL7	P40186	285 aa		2.68	□□□□□ -1.98
KRE33	YNL132W	CCM1	P48237	864 aa	Predicted RBP	2.68	□□□□□ -1.98
KRE33	YNL132W	MNP1	P53163	194 aa	Predicted RBP	2.68	□□□□□ -1.98
KRE33	YNL132W	HST1	P53685	503 aa		2.68	□□□□□ -1.98
KRE33	YNL132W	NIS1	P53939	407 aa		2.68	□□□□□ -1.98
KRE33	YNL132W	REX2	P54964	269 aa	Known RBP	2.68	□□□□□ -1.98
KRE33	YNL132W	YLH47	Q06493	454 aa		2.68	□□□□□ -1.98
KRE33	YNL132W	MCP2	Q06567	569 aa		2.68	□□□□□ -1.98
KRE33	YNL132W	OPI10	Q08202	246 aa		2.68	□□□□□ -1.98
KRE33	YNL132W	APC2	Q12440	853 aa		2.68	□□□□□ -1.98
KRE33	YNL132W	NUP192	P47054	1683 aa		2.67	□□□□□ -1.98
KRE33	YNL132W	SPO16	P17122	198 aa		2.67	□□□□□ -1.98
KRE33	YNL132W	SRO9	P25567	434 aa	Known RBP	2.67	□□□□□ -1.98
KRE33	YNL132W	GUT1	P32190	709 aa		2.67	□□□□□ -1.98
KRE33	YNL132W	EUG1	P32474	517 aa		2.67	□□□□□ -1.98
KRE33	YNL132W	PRP40	P33203	583 aa	Known RBP	2.67	□□□□□ -1.98
KRE33	YNL132W	BUD27	P43573	796 aa	Known RBP RIP-Chip data	2.67	□□□□□ -1.98	not detected
KRE33	YNL132W	CNN1	P43618	361 aa		2.67	□□□□□ -1.98
KRE33	YNL132W	MSB3	P48566	633 aa	Predicted RBP	2.67	□□□□□ -1.98
KRE33	YNL132W	DBP9	Q06218	594 aa	Known RBP	2.67	□□□□□ -1.98
KRE33	YNL132W	ESC2	Q06340	456 aa		2.67	□□□□□ -1.98
KRE33	YNL132W	SMF3	Q12078	473 aa	Predicted RBP	2.67	□□□□□ -1.98
KRE33	YNL132W	RKM4	Q12504	494 aa		2.67	□□□□□ -1.98
KRE33	YNL132W	TRP5	P00931	707 aa	Known RBP	2.67	□□□□□ -1.98
KRE33	YNL132W	RED1	P14291	827 aa		2.67	□□□□□ -1.98
KRE33	YNL132W	CYC8	P14922	966 aa		2.67	□□□□□ -1.98
KRE33	YNL132W	PET123	P17558	318 aa		2.67	□□□□□ -1.98
KRE33	YNL132W	MSH3	P25336	1018 aa		2.67	□□□□□ -1.98
KRE33	YNL132W	NIC96	P34077	839 aa		2.67	□□□□□ -1.98
KRE33	YNL132W	MAC1	P35192	417 aa		2.67	□□□□□ -1.98
KRE33	YNL132W	KTR4	P38131	464 aa		2.67	□□□□□ -1.98
KRE33	YNL132W	BCD1	P38772	366 aa		2.67	□□□□□ -1.98
KRE33	YNL132W	GEM1	P39722	662 aa		2.67	□□□□□ -1.98
KRE33	YNL132W	ARB1	P40024	610 aa	Known RBP	2.67	□□□□□ -1.98
KRE33	YNL132W	FMP10	P40098	244 aa		2.67	□□□□□ -1.98
KRE33	YNL132W	HXT8	P40886	569 aa		2.67	□□□□□ -1.98
KRE33	YNL132W	OCA1	P50946	238 aa	Predicted RBP	2.67	□□□□□ -1.98
KRE33	YNL132W	YLR287C	Q05881	355 aa		2.67	□□□□□ -1.98
KRE33	YNL132W	FAL1	Q12099	399 aa	Known RBP	2.67	□□□□□ -1.98
KRE33	YNL132W	RRP6	Q12149	733 aa	Known RBP	2.67	□□□□□ -1.98
KRE33	YNL132W	PHM7	Q12252	991 aa		2.67	□□□□□ -1.98
KRE33	YNL132W	CAN1	P04817	590 aa		2.67	□□□□□ -1.98
KRE33	YNL132W	MRP7	P12687	371 aa		2.67	□□□□□ -1.98
KRE33	YNL132W	RET1	P22276	1149 aa	Known RBP	2.67	□□□□□ -1.98
KRE33	YNL132W	DAL80	P26343	269 aa		2.67	□□□□□ -1.98
KRE33	YNL132W	LYP1	P32487	611 aa		2.67	□□□□□ -1.98
KRE33	YNL132W	ISF1	P32488	338 aa		2.67	□□□□□ -1.98
KRE33	YNL132W	GCD6	P32501	712 aa	Known RBP	2.67	□□□□□ -1.98
KRE33	YNL132W	HSP78	P33416	811 aa		2.67	□□□□□ -1.98
KRE33	YNL132W	YKL069W	P36088	180 aa		2.67	□□□□□ -1.98
KRE33	YNL132W	CCL1	P37366	393 aa		2.67	□□□□□ -1.98
KRE33	YNL132W	GGA2	P38817	585 aa	Known RBP	2.67	□□□□□ -1.98
KRE33	YNL132W	SPC72	P39723	622 aa		2.67	□□□□□ -1.98
KRE33	YNL132W	PSY2	P40164	858 aa		2.67	□□□□□ -1.98
KRE33	YNL132W	GCD10	P41814	478 aa		2.67	□□□□□ -1.98
KRE33	YNL132W	ZIM17	P42844	174 aa		2.67	□□□□□ -1.98
KRE33	YNL132W	AGX1	P43567	385 aa		2.67	□□□□□ -1.98
KRE33	YNL132W	RET2	P43621	546 aa		2.67	□□□□□ -1.98
KRE33	YNL132W	NNF2	P53253	936 aa		2.67	□□□□□ -1.98
KRE33	YNL132W	SNZ1	Q03148	297 aa		2.67	□□□□□ -1.98
KRE33	YNL132W	TRS120	Q04183	1289 aa		2.67	□□□□□ -1.98
KRE33	YNL132W	SPO75	Q07798	868 aa		2.67	□□□□□ -1.98
KRE33	YNL132W	GPI13	Q07830	1017 aa		2.67	□□□□□ -1.98
KRE33	YNL132W	TFC8	Q12308	588 aa		2.67	□□□□□ -1.98
KRE33	YNL132W	NOP56	Q12460	504 aa	Known RBP RIP-Chip data	2.67	□□□□□ -1.98	not detected
KRE33	YNL132W	RAD9	P14737	1309 aa		2.67	□□□□□ -1.98
KRE33	YNL132W	SSK22	P25390	1331 aa	Predicted RBP	2.67	□□□□□ -1.98
KRE33	YNL132W	ROM2	P51862	1356 aa	Known RBP	2.67	□□□□□ -1.98
KRE33	YNL132W	CCP1	P00431	361 aa		2.66	□□□□□ -1.98
KRE33	YNL132W	HMG1	P12683	1054 aa		2.66	□□□□□ -1.98
KRE33	YNL132W	PMS1	P14242	873 aa		2.66	□□□□□ -1.98
KRE33	YNL132W	IMP2'	P32351	346 aa		2.66	□□□□□ -1.98
KRE33	YNL132W	RAD17	P48581	401 aa		2.66	□□□□□ -1.98
KRE33	YNL132W	RNR4	P49723	345 aa	Known RBP	2.66	□□□□□ -1.98
KRE33	YNL132W	SDA1	P53313	767 aa	Known RBP	2.66	□□□□□ -1.98
KRE33	YNL132W	YNL050C	P53952	270 aa		2.66	□□□□□ -1.98
KRE33	YNL132W	SMD2	Q06217	110 aa	Known RBP	2.66	□□□□□ -1.98
KRE33	YNL132W	CSR1	Q06705	408 aa	Known RBP	2.66	□□□□□ -1.98
KRE33	YNL132W	OXR1	Q08952	273 aa		2.66	□□□□□ -1.98
KRE33	YNL132W	MCD1	Q12158	566 aa		2.66	□□□□□ -1.98
KRE33	YNL132W	MCM16	Q12262	181 aa		2.66	□□□□□ -1.98
KRE33	YNL132W	SPO21	Q12411	609 aa		2.66	□□□□□ -1.98
KRE33	YNL132W	RRP36	Q12481	300 aa	Predicted RBP	2.66	□□□□□ -1.98
KRE33	YNL132W	TY4B-H	P0C2J7	1802 aa		2.66	□□□□□ -1.98
KRE33	YNL132W	TY4B-J	P47024	1803 aa		2.66	□□□□□ -1.98
KRE33	YNL132W	RSF2	P46974	1380 aa		2.66	□□□□□ -1.98

Retrieved 100 of 5,963 RNA–protein pairs in 80.9 ms