RNA–Protein interactions for RNA: YMR309C

NIP1, Transcript of eIF3c subunit of the eukaryotic translation initiation factor 3 (eIF3), yeastyeast

Gene NIP1, Length 2,439 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NIP1YMR309C SIW14P53965 281 aa1.1□□□□□ -2.23
NIP1YMR309C MKK2P32491 506 aa1.1□□□□□ -2.23
NIP1YMR309C RPT1P33299 467 aaKnown RBP1.1□□□□□ -2.23
NIP1YMR309C CUE2P36075 443 aaKnown RBP1.1□□□□□ -2.23
NIP1YMR309C PPX1P38698 397 aa1.1□□□□□ -2.23
NIP1YMR309C STU2P46675 888 aa1.1□□□□□ -2.23
NIP1YMR309C RAT1Q02792 1006 aaKnown RBP1.1□□□□□ -2.23
NIP1YMR309C ROD1Q02805 837 aa1.1□□□□□ -2.23
NIP1YMR309C TMN2Q04562 672 aa1.1□□□□□ -2.23
NIP1YMR309C MSC6Q08818 692 aaKnown RBP1.1□□□□□ -2.23
NIP1YMR309C AFT2Q08957 416 aa1.1□□□□□ -2.23
NIP1YMR309C KCS1Q12494 1050 aa1.1□□□□□ -2.23
NIP1YMR309C MET4P32389 672 aa1.09□□□□□ -2.23
NIP1YMR309C POA1P38218 177 aa1.09□□□□□ -2.23
NIP1YMR309C MGE1P38523 228 aa1.09□□□□□ -2.23
NIP1YMR309C FAA3P39002 694 aa1.09□□□□□ -2.23
NIP1YMR309C HXT13P39924 564 aa1.09□□□□□ -2.23
NIP1YMR309C MRPS18P42847 217 aa1.09□□□□□ -2.23
NIP1YMR309C BUL1P48524 976 aa1.09□□□□□ -2.23
NIP1YMR309C GNP1P48813 663 aa1.09□□□□□ -2.23
NIP1YMR309C HXT17P53631 564 aa1.09□□□□□ -2.23
NIP1YMR309C HXT15P54854 567 aa1.09□□□□□ -2.23
NIP1YMR309C LAS17Q12446 633 aa1.09□□□□□ -2.23
NIP1YMR309C DBP5P20449 482 aaKnown RBP1.09□□□□□ -2.24
NIP1YMR309C BAS1P22035 811 aa1.09□□□□□ -2.24
NIP1YMR309C SYP1P25623 870 aaKnown RBP1.09□□□□□ -2.24
NIP1YMR309C EFT1P32324 842 aaKnown RBP1.09□□□□□ -2.24
NIP1YMR309C IPL1P38991 367 aa1.09□□□□□ -2.24
NIP1YMR309C MPH1P40562 993 aa1.09□□□□□ -2.24
NIP1YMR309C CNN1P43618 361 aa1.09□□□□□ -2.24
NIP1YMR309C HFM1P51979 1187 aa1.09□□□□□ -2.24
NIP1YMR309C OMS1Q06668 471 aa1.09□□□□□ -2.24
NIP1YMR309C IRC10Q08118 586 aa1.09□□□□□ -2.24
NIP1YMR309C YOL073CQ08232 322 aa1.09□□□□□ -2.24
NIP1YMR309C MCD1Q12158 566 aa1.09□□□□□ -2.24
NIP1YMR309C NDJ1Q12366 352 aa1.09□□□□□ -2.24
NIP1YMR309C BI4P03879 638 aa1.08□□□□□ -2.24
NIP1YMR309C THS1P04801 734 aaKnown RBP1.08□□□□□ -2.24
NIP1YMR309C RAD27P26793 382 aa1.08□□□□□ -2.24
NIP1YMR309C MLS1P30952 554 aa1.08□□□□□ -2.24
NIP1YMR309C SEC8P32855 1065 aa1.08□□□□□ -2.24
NIP1YMR309C SLA2P33338 968 aa1.08□□□□□ -2.24
NIP1YMR309C UGA2P38067 497 aa1.08□□□□□ -2.24
NIP1YMR309C KTR4P38131 464 aa1.08□□□□□ -2.24
NIP1YMR309C GEM1P39722 662 aa1.08□□□□□ -2.24
NIP1YMR309C ZRG8P40021 1076 aa1.08□□□□□ -2.24
NIP1YMR309C MRL1Q06815 381 aa1.08□□□□□ -2.24
NIP1YMR309C YLR040CQ07988 224 aa1.08□□□□□ -2.24
NIP1YMR309C MCH5Q08777 521 aa1.08□□□□□ -2.24
NIP1YMR309C GUP2Q08929 609 aa1.08□□□□□ -2.24
NIP1YMR309C ACM1Q08981 209 aa1.08□□□□□ -2.24
NIP1YMR309C RPS26AP39938 119 aaKnown RBP1.08□□□□□ -2.24
NIP1YMR309C RPS26BP39939 119 aaKnown RBP1.08□□□□□ -2.24
NIP1YMR309C URM1P40554 99 aaPredicted RBP1.08□□□□□ -2.24
NIP1YMR309C POL32P47110 350 aa1.08□□□□□ -2.24
NIP1YMR309C MTC3P53077 123 aa1.08□□□□□ -2.24
NIP1YMR309C NCS6P53088 359 aa1.08□□□□□ -2.24
NIP1YMR309C GNT1Q12096 491 aa1.08□□□□□ -2.24
NIP1YMR309C WHI5Q12416 295 aa1.08□□□□□ -2.24
NIP1YMR309C RPL11AP0C0W9 174 aaKnown RBP1.07□□□□□ -2.24
NIP1YMR309C MCM7P38132 845 aa1.07□□□□□ -2.24
NIP1YMR309C YAP1801P38856 637 aa1.07□□□□□ -2.24
NIP1YMR309C PNT1P38969 423 aa1.07□□□□□ -2.24
NIP1YMR309C MXR1P40029 184 aa1.07□□□□□ -2.24
NIP1YMR309C STB4P50104 949 aa1.07□□□□□ -2.24
NIP1YMR309C CDA1Q06702 301 aa1.07□□□□□ -2.24
NIP1YMR309C XYL2Q07993 356 aa1.07□□□□□ -2.24
NIP1YMR309C ACF2Q12168 779 aa1.07□□□□□ -2.24
NIP1YMR309C NPC2Q12408 173 aa1.07□□□□□ -2.24
NIP1YMR309C RPL11BQ3E757 174 aaPredicted RBP1.07□□□□□ -2.24
NIP1YMR309C SPE1P08432 466 aa1.07□□□□□ -2.24
NIP1YMR309C DBP2P24783 546 aaKnown RBP1.07□□□□□ -2.24
NIP1YMR309C ERG4P25340 473 aa1.07□□□□□ -2.24
NIP1YMR309C KAR4P25583 335 aa1.07□□□□□ -2.24
NIP1YMR309C MCM2P29469 868 aa1.07□□□□□ -2.24
NIP1YMR309C SUL1P38359 859 aa1.07□□□□□ -2.24
NIP1YMR309C YGR122WP53272 402 aa1.07□□□□□ -2.24
NIP1YMR309C TIM44Q01852 431 aa1.07□□□□□ -2.24
NIP1YMR309C YLL058WQ12198 575 aa1.07□□□□□ -2.24
NIP1YMR309C ICT1Q12385 394 aa1.07□□□□□ -2.24
NIP1YMR309C RAD2P07276 1031 aa1.06□□□□□ -2.24
NIP1YMR309C TRP4P07285 380 aaPredicted RBP1.06□□□□□ -2.24
NIP1YMR309C ENA1P13587 1091 aa1.06□□□□□ -2.24
NIP1YMR309C ATG19P35193 415 aa1.06□□□□□ -2.24
NIP1YMR309C MTH1P35198 433 aa1.06□□□□□ -2.24
NIP1YMR309C YGR012WP53206 393 aa1.06□□□□□ -2.24
NIP1YMR309C ENA2Q01896 1091 aa1.06□□□□□ -2.24
NIP1YMR309C TAF7Q05021 590 aa1.06□□□□□ -2.24
NIP1YMR309C OSW2Q12202 724 aa1.06□□□□□ -2.24
NIP1YMR309C ENA5Q12691 1091 aa1.06□□□□□ -2.24
NIP1YMR309C HSF1P10961 833 aa1.06□□□□□ -2.24
NIP1YMR309C YER158CP40095 573 aa1.06□□□□□ -2.24
NIP1YMR309C PSP2P50109 593 aaKnown RBP1.06□□□□□ -2.24
NIP1YMR309C GND2P53319 492 aa1.06□□□□□ -2.24
NIP1YMR309C RNT1Q02555 471 aa1.06□□□□□ -2.24
NIP1YMR309C TIF35Q04067 274 aaKnown RBP1.06□□□□□ -2.24
NIP1YMR309C ESF1Q06344 628 aaKnown RBP1.06□□□□□ -2.24
NIP1YMR309C SPP382Q06411 708 aaPredicted RBP1.06□□□□□ -2.24
NIP1YMR309C MSL5Q12186 476 aaKnown RBP RIP-Chip data1.06□□□□□ -2.24not detected
NIP1YMR309C GCR1P07261 785 aa1.05□□□□□ -2.24
Retrieved 100 of 5,963 RNA–protein pairs in 27.9 ms