RNA–Protein interactions for RNA: YMR308C

PSE1, Transcript of Karyopherin/importin that interacts with the nuclear pore complex, yeastyeast

Gene PSE1, Length 3,270 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PSE1YMR308C VMA8P32610 256 aaKnown RBP5.34□□□□□ -1.55
PSE1YMR308C MPT5P39016 859 aaKnown RBP RIP-Chip data5.34□□□□□ -1.55not detected
PSE1YMR308C JJJ2P46997 583 aa5.34□□□□□ -1.55
PSE1YMR308C ESC2Q06340 456 aa5.34□□□□□ -1.55
PSE1YMR308C YOL036WQ08206 761 aa5.34□□□□□ -1.55
PSE1YMR308C BUD7Q08754 746 aa5.34□□□□□ -1.55
PSE1YMR308C NOT5Q12514 560 aaPredicted RBP5.34□□□□□ -1.55
PSE1YMR308C HSP60P19882 572 aaKnown RBP5.33□□□□□ -1.56
PSE1YMR308C STE13P33894 931 aa5.33□□□□□ -1.56
PSE1YMR308C DED81P38707 554 aaKnown RBP5.33□□□□□ -1.56
PSE1YMR308C ORM1P53224 222 aa5.33□□□□□ -1.56
PSE1YMR308C PLP1Q04004 230 aa5.33□□□□□ -1.56
PSE1YMR308C CRN1Q06440 651 aa5.33□□□□□ -1.56
PSE1YMR308C ACF2Q12168 779 aa5.33□□□□□ -1.56
PSE1YMR308C ADF1Q2V2Q1 113 aa5.33□□□□□ -1.56
PSE1YMR308C ADE8P04161 214 aa5.33□□□□□ -1.56
PSE1YMR308C MET4P32389 672 aa5.33□□□□□ -1.56
PSE1YMR308C SLA1P32790 1244 aa5.33□□□□□ -1.56
PSE1YMR308C CNS1P33313 385 aa5.33□□□□□ -1.56
PSE1YMR308C GDT1P38301 280 aaPredicted RBP5.33□□□□□ -1.56
PSE1YMR308C SET1P38827 1080 aaKnown RBP5.33□□□□□ -1.56
PSE1YMR308C VPS70P47161 811 aa5.33□□□□□ -1.56
PSE1YMR308C NSE5Q03718 556 aa5.33□□□□□ -1.56
PSE1YMR308C LSO2Q3E772 92 aaKnown RBP5.33□□□□□ -1.56
PSE1YMR308C PDR18P53756 1333 aa5.33□□□□□ -1.56
PSE1YMR308C VPS3P23643 1011 aa5.33□□□□□ -1.56
PSE1YMR308C ALG3P38179 458 aa5.33□□□□□ -1.56
PSE1YMR308C YHR131CP38835 850 aa5.33□□□□□ -1.56
PSE1YMR308C NOP16P40007 231 aaKnown RBP5.33□□□□□ -1.56
PSE1YMR308C PKP1P40530 394 aa5.33□□□□□ -1.56
PSE1YMR308C INA22P40576 216 aa5.33□□□□□ -1.56
PSE1YMR308C PHB1P40961 287 aa5.33□□□□□ -1.56
PSE1YMR308C UTP22P53254 1237 aaPredicted RBP5.33□□□□□ -1.56
PSE1YMR308C MCP2Q06567 569 aa5.33□□□□□ -1.56
PSE1YMR308C TOP2P06786 1428 aaKnown RBP5.32□□□□□ -1.56
PSE1YMR308C CLB3P24870 427 aa5.32□□□□□ -1.56
PSE1YMR308C MRC1P25588 1096 aa5.32□□□□□ -1.56
PSE1YMR308C SRB4P32569 687 aa5.32□□□□□ -1.56
PSE1YMR308C YME2P32843 850 aa5.32□□□□□ -1.56
PSE1YMR308C YKL050CP35736 922 aa5.32□□□□□ -1.56
PSE1YMR308C SAK1P38990 1142 aa5.32□□□□□ -1.56
PSE1YMR308C GEM1P39722 662 aa5.32□□□□□ -1.56
PSE1YMR308C HUL4P40985 892 aa5.32□□□□□ -1.56
PSE1YMR308C YGL242CP53066 181 aa5.32□□□□□ -1.56
PSE1YMR308C RPL34AP87262 121 aaPredicted RBP5.32□□□□□ -1.56
PSE1YMR308C SPN1Q06505 410 aaPredicted RBP5.32□□□□□ -1.56
PSE1YMR308C VAM6Q07468 1049 aa5.32□□□□□ -1.56
PSE1YMR308C MSH2P25847 964 aa5.32□□□□□ -1.56
PSE1YMR308C YKT6P36015 200 aaKnown RBP5.32□□□□□ -1.56
PSE1YMR308C AIM10P39965 576 aaKnown RBP5.32□□□□□ -1.56
PSE1YMR308C NUP84P52891 726 aa5.32□□□□□ -1.56
PSE1YMR308C MNP1P53163 194 aaPredicted RBP5.32□□□□□ -1.56
PSE1YMR308C TLG2Q08144 397 aa5.32□□□□□ -1.56
PSE1YMR308C LAP2Q10740 671 aa5.32□□□□□ -1.56
PSE1YMR308C TFC8Q12308 588 aa5.32□□□□□ -1.56
PSE1YMR308C MED4Q12343 284 aa5.32□□□□□ -1.56
PSE1YMR308C SSC1P0CS90 654 aaKnown RBP5.31□□□□□ -1.56
PSE1YMR308C KGD2P19262 463 aaPredicted RBP5.31□□□□□ -1.56
PSE1YMR308C MCM2P29469 868 aa5.31□□□□□ -1.56
PSE1YMR308C LYP1P32487 611 aa5.31□□□□□ -1.56
PSE1YMR308C MRP8P35719 219 aa5.31□□□□□ -1.56
PSE1YMR308C PCL7P40186 285 aa5.31□□□□□ -1.56
PSE1YMR308C LOC1P43586 204 aaPredicted RBP5.31□□□□□ -1.56
PSE1YMR308C STU2P46675 888 aa5.31□□□□□ -1.56
PSE1YMR308C LYS4P49367 693 aaPredicted RBP5.31□□□□□ -1.56
PSE1YMR308C BET4Q00618 327 aa5.31□□□□□ -1.56
PSE1YMR308C RPM2Q02773 1202 aa5.31□□□□□ -1.56
PSE1YMR308C YML083CQ04526 418 aa5.31□□□□□ -1.56
PSE1YMR308C SML1Q04964 104 aa5.31□□□□□ -1.56
PSE1YMR308C DCS1Q06151 350 aa5.31□□□□□ -1.56
PSE1YMR308C VPS36Q06696 566 aa5.31□□□□□ -1.56
PSE1YMR308C REX3Q12090 404 aa5.31□□□□□ -1.56
PSE1YMR308C NTG1P31378 399 aa5.31□□□□□ -1.56
PSE1YMR308C ISM1P48526 1002 aa5.31□□□□□ -1.56
PSE1YMR308C YGR266WP53326 701 aa5.31□□□□□ -1.56
PSE1YMR308C TGL2P54857 326 aa5.31□□□□□ -1.56
PSE1YMR308C SND1Q04007 877 aa5.31□□□□□ -1.56
PSE1YMR308C CDC53Q12018 815 aaKnown RBP5.31□□□□□ -1.56
PSE1YMR308C YKL068W-AQ3E826 78 aa5.31□□□□□ -1.56
PSE1YMR308C RPS3P05750 240 aaKnown RBP5.31□□□□□ -1.56
PSE1YMR308C ERG12P07277 443 aa5.31□□□□□ -1.56
PSE1YMR308C ZRG8P40021 1076 aa5.31□□□□□ -1.56
PSE1YMR308C SYF1Q04048 859 aaPredicted RBP5.31□□□□□ -1.56
PSE1YMR308C SSN2P38931 1420 aa5.31□□□□□ -1.56
PSE1YMR308C NCP1P16603 691 aaKnown RBP5.3□□□□□ -1.56
PSE1YMR308C BOI1P38041 980 aaKnown RBP5.3□□□□□ -1.56
PSE1YMR308C TIF5P38431 405 aaKnown RBP5.3□□□□□ -1.56
PSE1YMR308C RIO2P40160 425 aaKnown RBP5.3□□□□□ -1.56
PSE1YMR308C YIL166CP40445 542 aa5.3□□□□□ -1.56
PSE1YMR308C SBE2P42223 864 aaKnown RBP5.3□□□□□ -1.56
PSE1YMR308C URB2P47108 1174 aa5.3□□□□□ -1.56
PSE1YMR308C MPS2P53159 387 aa5.3□□□□□ -1.56
PSE1YMR308C PHO92Q06390 306 aa5.3□□□□□ -1.56
PSE1YMR308C RSC58Q07979 502 aa5.3□□□□□ -1.56
PSE1YMR308C CDC37P06101 506 aaKnown RBP5.3□□□□□ -1.56
PSE1YMR308C PRP6P19735 899 aaPredicted RBP5.3□□□□□ -1.56
PSE1YMR308C ICL1P28240 557 aaPredicted RBP5.3□□□□□ -1.56
PSE1YMR308C YKR018CP36114 725 aa5.3□□□□□ -1.56
PSE1YMR308C VPS51P36116 164 aa5.3□□□□□ -1.56
PSE1YMR308C YER137CP40083 148 aaKnown RBP5.3□□□□□ -1.56
Retrieved 100 of 5,963 RNA–protein pairs in 111.9 ms