RNA–Protein interactions for RNA: YML001W

YPT7, Transcript of Rab family GTPase, yeast

Gene YPT7, Length 627 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YPT7	YML001W	SPT7	P35177	1332 aa		4.87	□□□□□ -1.63
YPT7	YML001W	DED1	P06634	604 aa	Known RBP	4.86	□□□□□ -1.63
YPT7	YML001W	KIP1	P28742	1111 aa		4.86	□□□□□ -1.63
YPT7	YML001W	MKK2	P32491	506 aa		4.85	□□□□□ -1.63
YPT7	YML001W	SEC8	P32855	1065 aa		4.85	□□□□□ -1.63
YPT7	YML001W	BAP2	P38084	609 aa		4.85	□□□□□ -1.63
YPT7	YML001W	PAF1	P38351	445 aa		4.85	□□□□□ -1.63
YPT7	YML001W	UBP5	P39944	805 aa		4.85	□□□□□ -1.63
YPT7	YML001W	RAT1	Q02792	1006 aa	Known RBP	4.85	□□□□□ -1.63
YPT7	YML001W	RSC58	Q07979	502 aa		4.85	□□□□□ -1.63
YPT7	YML001W	RCL1	Q08096	367 aa	Predicted RBP	4.85	□□□□□ -1.63
YPT7	YML001W	YRF1-1	P0CX20	1796 aa		4.84	□□□□□ -1.63
YPT7	YML001W	YRF1-5	P0CX21	1796 aa		4.84	□□□□□ -1.63
YPT7	YML001W	YRF1-8	P0CX22	1796 aa		4.84	□□□□□ -1.63
YPT7	YML001W	GCN2	P15442	1659 aa		4.84	□□□□□ -1.63
YPT7	YML001W	ASF1	P32447	279 aa		4.84	□□□□□ -1.63
YPT7	YML001W	GPB2	P39717	880 aa		4.84	□□□□□ -1.63
YPT7	YML001W	RPN3	P40016	523 aa	Known RBP	4.84	□□□□□ -1.63
YPT7	YML001W	ESF1	Q06344	628 aa	Known RBP	4.84	□□□□□ -1.63
YPT7	YML001W	MRL1	Q06815	381 aa		4.84	□□□□□ -1.63
YPT7	YML001W	YPL260W	Q08977	551 aa		4.84	□□□□□ -1.63
YPT7	YML001W	IQG1	Q12280	1495 aa		4.83	□□□□□ -1.64
YPT7	YML001W	COQ4	O13525	335 aa		4.83	□□□□□ -1.64
YPT7	YML001W	GCR1	P07261	785 aa		4.83	□□□□□ -1.64
YPT7	YML001W	SNF5	P18480	905 aa		4.83	□□□□□ -1.64
YPT7	YML001W	ENP1	P38333	483 aa	Known RBP	4.83	□□□□□ -1.64
YPT7	YML001W	AIM26	P32858	118 aa		4.82	□□□□□ -1.64
YPT7	YML001W	THI80	P35202	319 aa		4.82	□□□□□ -1.64
YPT7	YML001W	ETP1	P38748	585 aa	Known RBP	4.82	□□□□□ -1.64
YPT7	YML001W	TNA1	P53322	534 aa		4.82	□□□□□ -1.64
YPT7	YML001W	MRPL22	P53881	309 aa		4.82	□□□□□ -1.64
YPT7	YML001W	HOS3	Q02959	697 aa	Known RBP	4.82	□□□□□ -1.64
YPT7	YML001W	RMD1	Q03441	430 aa		4.82	□□□□□ -1.64
YPT7	YML001W	SPO21	Q12411	609 aa		4.82	□□□□□ -1.64
YPT7	YML001W	AIM44	Q99299	758 aa		4.82	□□□□□ -1.64
YPT7	YML001W	PRP6	P19735	899 aa	Predicted RBP	4.81	□□□□□ -1.64
YPT7	YML001W	SYP1	P25623	870 aa	Known RBP	4.81	□□□□□ -1.64
YPT7	YML001W	CCZ1	P38273	704 aa		4.81	□□□□□ -1.64
YPT7	YML001W	RGD1	P38339	666 aa		4.81	□□□□□ -1.64
YPT7	YML001W	PIK1	P39104	1066 aa		4.81	□□□□□ -1.64
YPT7	YML001W	NBA1	Q08229	501 aa	Known RBP	4.81	□□□□□ -1.64
YPT7	YML001W	PDR12	Q02785	1511 aa		4.81	□□□□□ -1.64
YPT7	YML001W	BNR1	P40450	1375 aa		4.8	□□□□□ -1.64
YPT7	YML001W	SEC3	P33332	1336 aa	Known RBP	4.8	□□□□□ -1.64
YPT7	YML001W	DBP5	P20449	482 aa	Known RBP	4.8	□□□□□ -1.64
YPT7	YML001W	CNN1	P43618	361 aa		4.8	□□□□□ -1.64
YPT7	YML001W	ENV11	P53246	860 aa		4.8	□□□□□ -1.64
YPT7	YML001W	UBP3	Q01477	912 aa	Known RBP RIP-Chip data	4.8	□□□□□ -1.64	not detected
YPT7	YML001W	SPS1	P08458	490 aa		4.79	□□□□□ -1.64
YPT7	YML001W	DUT1	P33317	147 aa		4.79	□□□□□ -1.64
YPT7	YML001W	TAF5	P38129	798 aa		4.79	□□□□□ -1.64
YPT7	YML001W	MPH1	P40562	993 aa		4.79	□□□□□ -1.64
YPT7	YML001W	FOL2	P51601	243 aa	Known RBP	4.79	□□□□□ -1.64
YPT7	YML001W	RTT10	Q08924	1013 aa		4.79	□□□□□ -1.64
YPT7	YML001W	MMS1	Q06211	1407 aa		4.79	□□□□□ -1.64
YPT7	YML001W	YSP2	Q06681	1438 aa		4.79	□□□□□ -1.64
YPT7	YML001W	RER2	P35196	286 aa		4.78	□□□□□ -1.64
YPT7	YML001W	AIM3	P38266	947 aa	Known RBP	4.78	□□□□□ -1.64
YPT7	YML001W	YFL054C	P43549	646 aa		4.78	□□□□□ -1.64
YPT7	YML001W	RIM8	P53179	542 aa		4.78	□□□□□ -1.64
YPT7	YML001W	SNO2	P53823	222 aa		4.78	□□□□□ -1.64
YPT7	YML001W	OYE2	Q03558	400 aa	Known RBP	4.78	□□□□□ -1.64
YPT7	YML001W	YOR093C	Q12275	1648 aa		4.78	□□□□□ -1.64
YPT7	YML001W	SOD2	P00447	233 aa		4.77	□□□□□ -1.65
YPT7	YML001W	YER152C	P10356	443 aa		4.77	□□□□□ -1.65
YPT7	YML001W	PUF4	P25339	888 aa	Known RBP RIP-Chip data	4.77	□□□□□ -1.65	not detected
YPT7	YML001W	MLS1	P30952	554 aa		4.77	□□□□□ -1.65
YPT7	YML001W	ABZ1	P37254	787 aa	Predicted RBP	4.77	□□□□□ -1.65
YPT7	YML001W	SEC26	P41810	973 aa	Known RBP	4.77	□□□□□ -1.65
YPT7	YML001W	MET5	P47169	1442 aa		4.77	□□□□□ -1.65
YPT7	YML001W	YCR015C	P25616	317 aa		4.76	□□□□□ -1.65
YPT7	YML001W	PEP7	P32609	515 aa		4.76	□□□□□ -1.65
YPT7	YML001W	HNT2	P49775	206 aa		4.76	□□□□□ -1.65
YPT7	YML001W	YDR132C	Q03900	495 aa		4.76	□□□□□ -1.65
YPT7	YML001W	TIF35	Q04067	274 aa	Known RBP	4.76	□□□□□ -1.65
YPT7	YML001W	ESC8	Q08119	714 aa		4.76	□□□□□ -1.65
YPT7	YML001W	EEB1	Q02891	456 aa		4.75	□□□□□ -1.65
YPT7	YML001W	YPL277C	Q08989	487 aa		4.75	□□□□□ -1.65
YPT7	YML001W	TMA46	Q12000	345 aa	Known RBP	4.75	□□□□□ -1.65
YPT7	YML001W	CHC1	P22137	1653 aa	Known RBP	4.74	□□□□□ -1.65
YPT7	YML001W	LTE1	P07866	1435 aa		4.74	□□□□□ -1.65
YPT7	YML001W	RPS13	P05756	151 aa	Known RBP	4.74	□□□□□ -1.65
YPT7	YML001W	CDC34	P14682	295 aa		4.74	□□□□□ -1.65
YPT7	YML001W	RAD27	P26793	382 aa		4.74	□□□□□ -1.65
YPT7	YML001W	FLR1	P38124	548 aa		4.74	□□□□□ -1.65
YPT7	YML001W	TAF1	P46677	1066 aa		4.74	□□□□□ -1.65
YPT7	YML001W	RSB1	Q08417	382 aa		4.74	□□□□□ -1.65
YPT7	YML001W	GNT1	Q12096	491 aa		4.74	□□□□□ -1.65
YPT7	YML001W	RIB2	Q12362	591 aa	Known RBP	4.74	□□□□□ -1.65
YPT7	YML001W	MHP1	P43638	1398 aa		4.74	□□□□□ -1.65
YPT7	YML001W	DOP1	Q03921	1698 aa		4.73	□□□□□ -1.65
YPT7	YML001W	TRP2	P00899	507 aa	Known RBP	4.73	□□□□□ -1.65
YPT7	YML001W	PET112	P33893	541 aa		4.73	□□□□□ -1.65
YPT7	YML001W	FUN12	P39730	1002 aa	Known RBP	4.73	□□□□□ -1.65
YPT7	YML001W	LYP1	P32487	611 aa		4.72	□□□□□ -1.65
YPT7	YML001W	MNR2	P35724	969 aa		4.72	□□□□□ -1.65
YPT7	YML001W	PDS5	Q04264	1277 aa		4.72	□□□□□ -1.65
YPT7	YML001W	SGD1	Q06132	899 aa		4.72	□□□□□ -1.65
YPT7	YML001W	ATG13	Q06628	738 aa		4.72	□□□□□ -1.65
YPT7	YML001W	DRS2	P39524	1355 aa		4.72	□□□□□ -1.65

Retrieved 100 of 5,963 RNA–protein pairs in 171.1 ms