RNA–Protein interactions for RNA: YLR440C

SEC39, Transcript of Component of the Dsl1p tethering complex, yeastyeast

Gene SEC39, Length 2,130 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC39YLR440C ROX1P25042 368 aa5.41□□□□□ -1.54
SEC39YLR440C SFA1P32771 386 aa5.41□□□□□ -1.54
SEC39YLR440C RRP1P35178 278 aaPredicted RBP5.41□□□□□ -1.54
SEC39YLR440C APD1P38281 316 aa5.41□□□□□ -1.54
SEC39YLR440C YHR131CP38835 850 aa5.41□□□□□ -1.54
SEC39YLR440C RTS1P38903 757 aa5.41□□□□□ -1.54
SEC39YLR440C ESL1P40456 1118 aa5.41□□□□□ -1.54
SEC39YLR440C RSM7P47150 247 aa5.41□□□□□ -1.54
SEC39YLR440C GIM3P53900 129 aa5.41□□□□□ -1.54
SEC39YLR440C NOP15P53927 220 aaPredicted RBP5.41□□□□□ -1.54
SEC39YLR440C LAP2Q10740 671 aa5.41□□□□□ -1.54
SEC39YLR440C ATP4P05626 244 aa5.41□□□□□ -1.54
SEC39YLR440C OCA4P25366 362 aa5.41□□□□□ -1.54
SEC39YLR440C RSC6P25632 483 aa5.41□□□□□ -1.54
SEC39YLR440C YEL043WP32618 956 aa5.41□□□□□ -1.54
SEC39YLR440C RSM22P36056 628 aa5.41□□□□□ -1.54
SEC39YLR440C REI1P38344 393 aaPredicted RBP5.41□□□□□ -1.54
SEC39YLR440C ALD5P40047 520 aaKnown RBP5.41□□□□□ -1.54
SEC39YLR440C RRN5Q02983 363 aa5.41□□□□□ -1.54
SEC39YLR440C VPS60Q03390 229 aa5.41□□□□□ -1.54
SEC39YLR440C RRP17Q04031 235 aaPredicted RBP5.41□□□□□ -1.54
SEC39YLR440C RSC3Q06639 885 aa5.41□□□□□ -1.54
SEC39YLR440C REC8Q12188 680 aa5.41□□□□□ -1.54
SEC39YLR440C PIF1P07271 859 aa5.4□□□□□ -1.54
SEC39YLR440C REC107P21651 314 aa5.4□□□□□ -1.54
SEC39YLR440C GFD2P25370 566 aaKnown RBP5.4□□□□□ -1.54
SEC39YLR440C SRO9P25567 434 aaKnown RBP5.4□□□□□ -1.54
SEC39YLR440C SSH4P32343 579 aa5.4□□□□□ -1.54
SEC39YLR440C VMA8P32610 256 aaKnown RBP5.4□□□□□ -1.54
SEC39YLR440C RIB7P33312 244 aa5.4□□□□□ -1.54
SEC39YLR440C TEF4P36008 412 aaKnown RBP5.4□□□□□ -1.54
SEC39YLR440C MAK5P38112 773 aaPredicted RBP5.4□□□□□ -1.54
SEC39YLR440C SAP1P39955 897 aaKnown RBP5.4□□□□□ -1.54
SEC39YLR440C MNT3P40549 630 aa5.4□□□□□ -1.54
SEC39YLR440C RPN11P43588 306 aaKnown RBP5.4□□□□□ -1.54
SEC39YLR440C RIM21P48565 533 aa5.4□□□□□ -1.54
SEC39YLR440C NCS2P53923 493 aaPredicted RBP5.4□□□□□ -1.54
SEC39YLR440C LSO2Q3E772 92 aaKnown RBP5.4□□□□□ -1.54
SEC39YLR440C MET6P05694 767 aaKnown RBP5.39□□□□□ -1.55
SEC39YLR440C RPS3P05750 240 aaKnown RBP5.39□□□□□ -1.55
SEC39YLR440C PGI1P12709 554 aaKnown RBP5.39□□□□□ -1.55
SEC39YLR440C TRM1P15565 570 aaKnown RBP5.39□□□□□ -1.55
SEC39YLR440C PWP1P21304 576 aaKnown RBP5.39□□□□□ -1.55
SEC39YLR440C YME2P32843 850 aa5.39□□□□□ -1.55
SEC39YLR440C YKL222CP35995 705 aa5.39□□□□□ -1.55
SEC39YLR440C RGA1P39083 1007 aa5.39□□□□□ -1.55
SEC39YLR440C VAC8P39968 578 aa5.39□□□□□ -1.55
SEC39YLR440C RIO2P40160 425 aaKnown RBP5.39□□□□□ -1.55
SEC39YLR440C YIL166CP40445 542 aa5.39□□□□□ -1.55
SEC39YLR440C PHB1P40961 287 aa5.39□□□□□ -1.55
SEC39YLR440C SPR3P41901 512 aa5.39□□□□□ -1.55
SEC39YLR440C GCD14P46959 383 aaPredicted RBP5.39□□□□□ -1.55
SEC39YLR440C MSB3P48566 633 aaPredicted RBP5.39□□□□□ -1.55
SEC39YLR440C ARO80Q04052 950 aa5.39□□□□□ -1.55
SEC39YLR440C PSK1P31374 1356 aa5.39□□□□□ -1.55
SEC39YLR440C ADE6P38972 1358 aaKnown RBP5.39□□□□□ -1.55
SEC39YLR440C STF1P01098 86 aa5.39□□□□□ -1.55
SEC39YLR440C PBS2P08018 668 aa5.39□□□□□ -1.55
SEC39YLR440C STI1P15705 589 aaKnown RBP RIP-Chip data5.39□□□□□ -1.55not detected
SEC39YLR440C YRO2P38079 344 aa5.39□□□□□ -1.55
SEC39YLR440C YHB1P39676 399 aaKnown RBP5.39□□□□□ -1.55
SEC39YLR440C DOT5P40553 215 aa5.39□□□□□ -1.55
SEC39YLR440C YJL049WP47048 450 aa5.39□□□□□ -1.55
SEC39YLR440C SNX4P47057 423 aa5.39□□□□□ -1.55
SEC39YLR440C POL32P47110 350 aa5.39□□□□□ -1.55
SEC39YLR440C FOL2P51601 243 aaKnown RBP5.39□□□□□ -1.55
SEC39YLR440C MNP1P53163 194 aaPredicted RBP5.39□□□□□ -1.55
SEC39YLR440C DIP5P53388 608 aa5.39□□□□□ -1.55
SEC39YLR440C SEC5P89102 971 aa5.39□□□□□ -1.55
SEC39YLR440C ULP1Q02724 621 aa5.39□□□□□ -1.55
SEC39YLR440C SND1Q04007 877 aa5.39□□□□□ -1.55
SEC39YLR440C LOT6Q07923 191 aa5.39□□□□□ -1.55
SEC39YLR440C YIG1Q08956 461 aa5.39□□□□□ -1.55
SEC39YLR440C PHM7Q12252 991 aa5.39□□□□□ -1.55
SEC39YLR440C TFC8Q12308 588 aa5.39□□□□□ -1.55
SEC39YLR440C NOT5Q12514 560 aaPredicted RBP5.39□□□□□ -1.55
SEC39YLR440C YRF1-4O13559 1382 aa5.39□□□□□ -1.55
SEC39YLR440C YML133CQ03099 1374 aa5.39□□□□□ -1.55
SEC39YLR440C YLL067CQ07888 1374 aa5.39□□□□□ -1.55
SEC39YLR440C YLL066CQ99208 1374 aa5.39□□□□□ -1.55
SEC39YLR440C TY4B-HP0C2J7 1802 aa5.38□□□□□ -1.55
SEC39YLR440C TY4B-JP47024 1803 aa5.38□□□□□ -1.55
SEC39YLR440C GCD1P09032 578 aaPredicted RBP5.38□□□□□ -1.55
SEC39YLR440C TPS2P31688 896 aaKnown RBP5.38□□□□□ -1.55
SEC39YLR440C ASF2P32448 525 aaPredicted RBP5.38□□□□□ -1.55
SEC39YLR440C TFB1P32776 642 aa5.38□□□□□ -1.55
SEC39YLR440C YKR018CP36114 725 aa5.38□□□□□ -1.55
SEC39YLR440C PBP2P38151 413 aaKnown RBP RIP-Chip data5.38□□□□□ -1.55not detected
SEC39YLR440C CIN4P39110 191 aa5.38□□□□□ -1.55
SEC39YLR440C PCL7P40186 285 aa5.38□□□□□ -1.55
SEC39YLR440C TOK1P40310 691 aa5.38□□□□□ -1.55
SEC39YLR440C NUP85P46673 744 aa5.38□□□□□ -1.55
SEC39YLR440C CEG1Q01159 459 aaPredicted RBP5.38□□□□□ -1.55
SEC39YLR440C YDR090CQ03193 310 aa5.38□□□□□ -1.55
SEC39YLR440C TAF11Q04226 346 aa5.38□□□□□ -1.55
SEC39YLR440C GNT1Q12096 491 aa5.38□□□□□ -1.55
SEC39YLR440C APC11Q12157 165 aa5.38□□□□□ -1.55
SEC39YLR440C SMC6Q12749 1114 aa5.38□□□□□ -1.55
SEC39YLR440C PRS1P32895 427 aaKnown RBP5.38□□□□□ -1.55
SEC39YLR440C CNS1P33313 385 aa5.38□□□□□ -1.55
Retrieved 100 of 5,963 RNA–protein pairs in 64.3 ms