RNA–Protein interactions for RNA: YLR003C

CMS1, Transcript of Putative subunit of the 90S preribosome processome complex, yeastyeast

Gene CMS1, Length 876 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CMS1YLR003C HXT13P39924 564 aa5.1□□□□□ -1.59
CMS1YLR003C HXT17P53631 564 aa5.1□□□□□ -1.59
CMS1YLR003C HXT15P54854 567 aa5.1□□□□□ -1.59
CMS1YLR003C BI4P03879 638 aa5.09□□□□□ -1.59
CMS1YLR003C DBP5P20449 482 aaKnown RBP5.09□□□□□ -1.59
CMS1YLR003C RPT1P33299 467 aaKnown RBP5.09□□□□□ -1.59
CMS1YLR003C MRPS18P42847 217 aa5.09□□□□□ -1.59
CMS1YLR003C STU2P46675 888 aa5.09□□□□□ -1.59
CMS1YLR003C HFM1P51979 1187 aa5.09□□□□□ -1.59
CMS1YLR003C KCS1Q12494 1050 aa5.09□□□□□ -1.59
CMS1YLR003C ENA1P13587 1091 aa5.08□□□□□ -1.6
CMS1YLR003C PRE9P23638 258 aaKnown RBP5.08□□□□□ -1.6
CMS1YLR003C MXR1P40029 184 aa5.08□□□□□ -1.6
CMS1YLR003C MPH1P40562 993 aa5.08□□□□□ -1.6
CMS1YLR003C QRI1P43123 477 aaKnown RBP5.08□□□□□ -1.6
CMS1YLR003C NPL3Q01560 414 aaKnown RBP RIP-Chip data5.08□□□□□ -1.6not detected
CMS1YLR003C ENA2Q01896 1091 aa5.08□□□□□ -1.6
CMS1YLR003C ACM1Q08981 209 aa5.08□□□□□ -1.6
CMS1YLR003C ENA5Q12691 1091 aa5.08□□□□□ -1.6
CMS1YLR003C GEF1P37020 779 aa5.07□□□□□ -1.6
CMS1YLR003C ENB1Q08299 606 aa5.07□□□□□ -1.6
CMS1YLR003C THS1P04801 734 aaKnown RBP5.06□□□□□ -1.6
CMS1YLR003C GEM1P39722 662 aa5.06□□□□□ -1.6
CMS1YLR003C LGE1Q02796 332 aaKnown RBP5.06□□□□□ -1.6
CMS1YLR003C RPL11AP0C0W9 174 aaKnown RBP5.05□□□□□ -1.6
CMS1YLR003C EFT1P32324 842 aaKnown RBP5.05□□□□□ -1.6
CMS1YLR003C GNP1P48813 663 aa5.05□□□□□ -1.6
CMS1YLR003C TMN2Q04562 672 aa5.05□□□□□ -1.6
CMS1YLR003C YOL073CQ08232 322 aa5.05□□□□□ -1.6
CMS1YLR003C RPL11BQ3E757 174 aaPredicted RBP5.05□□□□□ -1.6
CMS1YLR003C CUE2P36075 443 aaKnown RBP5.04□□□□□ -1.6
CMS1YLR003C THI12P42883 340 aa5.04□□□□□ -1.6
CMS1YLR003C THI5P43534 340 aa5.04□□□□□ -1.6
CMS1YLR003C THI11P47183 340 aa5.04□□□□□ -1.6
CMS1YLR003C YGR122WP53272 402 aa5.04□□□□□ -1.6
CMS1YLR003C MRL1Q06815 381 aa5.04□□□□□ -1.6
CMS1YLR003C THI13Q07748 340 aa5.04□□□□□ -1.6
CMS1YLR003C YLR040CQ07988 224 aa5.04□□□□□ -1.6
CMS1YLR003C MCH5Q08777 521 aa5.04□□□□□ -1.6
CMS1YLR003C MSC6Q08818 692 aaKnown RBP5.04□□□□□ -1.6
CMS1YLR003C SLA2P33338 968 aa5.03□□□□□ -1.6
CMS1YLR003C SUL1P38359 859 aa5.03□□□□□ -1.6
CMS1YLR003C XYL2Q07993 356 aa5.03□□□□□ -1.6
CMS1YLR003C GNT1Q12096 491 aa5.03□□□□□ -1.6
CMS1YLR003C WHI5Q12416 295 aa5.03□□□□□ -1.6
CMS1YLR003C DBP2P24783 546 aaKnown RBP5.02□□□□□ -1.61
CMS1YLR003C STM1P39015 273 aaKnown RBP5.02□□□□□ -1.61
CMS1YLR003C NPC2Q12408 173 aa5.02□□□□□ -1.61
CMS1YLR003C LAS17Q12446 633 aa5.02□□□□□ -1.61
CMS1YLR003C OMS1Q06668 471 aa5.01□□□□□ -1.61
CMS1YLR003C IRC10Q08118 586 aa5.01□□□□□ -1.61
CMS1YLR003C KTR4P38131 464 aa5□□□□□ -1.61
CMS1YLR003C MCM7P38132 845 aa5□□□□□ -1.61
CMS1YLR003C YAP1801P38856 637 aa5□□□□□ -1.61
CMS1YLR003C BUL1P48524 976 aa5□□□□□ -1.61
CMS1YLR003C STB4P50104 949 aa5□□□□□ -1.61
CMS1YLR003C YGR012WP53206 393 aa5□□□□□ -1.61
CMS1YLR003C OSW2Q12202 724 aa5□□□□□ -1.61
CMS1YLR003C RAD2P07276 1031 aa4.99□□□□□ -1.61
CMS1YLR003C TIM44Q01852 431 aa4.99□□□□□ -1.61
CMS1YLR003C GCR1P07261 785 aa4.98□□□□□ -1.61
CMS1YLR003C SPE1P08432 466 aa4.98□□□□□ -1.61
CMS1YLR003C PNT1P38969 423 aa4.98□□□□□ -1.61
CMS1YLR003C MTC3P53077 123 aa4.98□□□□□ -1.61
CMS1YLR003C NCS6P53088 359 aa4.98□□□□□ -1.61
CMS1YLR003C TIF35Q04067 274 aaKnown RBP4.98□□□□□ -1.61
CMS1YLR003C ACF2Q12168 779 aa4.98□□□□□ -1.61
CMS1YLR003C KAR4P25583 335 aa4.97□□□□□ -1.61
CMS1YLR003C SSF1P38789 453 aaPredicted RBP4.97□□□□□ -1.61
CMS1YLR003C PSP2P50109 593 aaKnown RBP4.97□□□□□ -1.61
CMS1YLR003C CDA1Q06702 301 aa4.97□□□□□ -1.61
CMS1YLR003C GUP2Q08929 609 aa4.97□□□□□ -1.61
CMS1YLR003C ERG4P25340 473 aa4.96□□□□□ -1.62
CMS1YLR003C CCC2P38995 1004 aa4.96□□□□□ -1.62
CMS1YLR003C URM1P40554 99 aaPredicted RBP4.96□□□□□ -1.62
CMS1YLR003C SPP382Q06411 708 aaPredicted RBP4.96□□□□□ -1.62
CMS1YLR003C CYC8P14922 966 aa4.95□□□□□ -1.62
CMS1YLR003C RER2P35196 286 aa4.95□□□□□ -1.62
CMS1YLR003C YMR206WQ03695 313 aa4.95□□□□□ -1.62
CMS1YLR003C SRP101P32916 621 aa4.94□□□□□ -1.62
CMS1YLR003C ATG19P35193 415 aa4.94□□□□□ -1.62
CMS1YLR003C HSF1P10961 833 aa4.93□□□□□ -1.62
CMS1YLR003C CAD1P24813 409 aaKnown RBP4.93□□□□□ -1.62
CMS1YLR003C RAD27P26793 382 aa4.93□□□□□ -1.62
CMS1YLR003C TAF7Q05021 590 aa4.93□□□□□ -1.62
CMS1YLR003C NDJ1Q12366 352 aa4.93□□□□□ -1.62
CMS1YLR003C MTH1P35198 433 aa4.92□□□□□ -1.62
CMS1YLR003C RPS26AP39938 119 aaKnown RBP4.92□□□□□ -1.62
CMS1YLR003C RPS26BP39939 119 aaKnown RBP4.92□□□□□ -1.62
CMS1YLR003C YER158CP40095 573 aa4.92□□□□□ -1.62
CMS1YLR003C TRP4P07285 380 aaPredicted RBP4.91□□□□□ -1.62
CMS1YLR003C ECM21P38167 1117 aaKnown RBP4.91□□□□□ -1.62
CMS1YLR003C RNT1Q02555 471 aa4.91□□□□□ -1.62
CMS1YLR003C SEC20P28791 383 aa4.9□□□□□ -1.63
CMS1YLR003C GND2P53319 492 aa4.9□□□□□ -1.63
CMS1YLR003C MUK1Q02866 612 aa4.9□□□□□ -1.63
CMS1YLR003C YLL058WQ12198 575 aa4.9□□□□□ -1.63
CMS1YLR003C SPC42P36094 363 aa4.89□□□□□ -1.63
CMS1YLR003C WHI4Q07655 649 aaKnown RBP4.89□□□□□ -1.63
CMS1YLR003C MDM38Q08179 573 aa4.89□□□□□ -1.63
Retrieved 100 of 5,963 RNA–protein pairs in 51.3 ms