RNA–Protein interactions for RNA: YKL057C

NUP120, Transcript of Subunit of the Nup84p subcomplex of the nuclear pore complex (NPC), yeast

Gene NUP120, Length 3,114 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NUP120	YKL057C	MCA1	Q08601	432 aa		3.07	□□□□□ -1.92
NUP120	YKL057C	TRE1	Q08919	783 aa		3.07	□□□□□ -1.92
NUP120	YKL057C	MDL2	P33311	773 aa		3.06	□□□□□ -1.92
NUP120	YKL057C	NMD2	P38798	1089 aa	Known RBP	3.06	□□□□□ -1.92
NUP120	YKL057C	FPR3	P38911	411 aa	Known RBP	3.06	□□□□□ -1.92
NUP120	YKL057C	ICP55	P40051	511 aa		3.06	□□□□□ -1.92
NUP120	YKL057C	SPT20	P50875	604 aa		3.06	□□□□□ -1.92
NUP120	YKL057C	AGP1	P25376	633 aa		3.06	□□□□□ -1.92
NUP120	YKL057C	SAF1	P38352	637 aa		3.06	□□□□□ -1.92
NUP120	YKL057C	MSC7	P38694	644 aa		3.06	□□□□□ -1.92
NUP120	YKL057C	YER158C	P40095	573 aa		3.06	□□□□□ -1.92
NUP120	YKL057C	VTS1	Q08831	523 aa	Known RBP RIP-Chip data	3.06	□□□□□ -1.92	not detected
NUP120	YKL057C	PBP2	P38151	413 aa	Known RBP RIP-Chip data	3.06	□□□□□ -1.92	not detected
NUP120	YKL057C	JSN1	P47135	1091 aa	Known RBP RIP-Chip data	3.06	□□□□□ -1.92	not detected
NUP120	YKL057C	YBP2	P53169	641 aa		3.06	□□□□□ -1.92
NUP120	YKL057C	YPL277C	Q08989	487 aa		3.06	□□□□□ -1.92
NUP120	YKL057C	RAD53	P22216	821 aa		3.05	□□□□□ -1.92
NUP120	YKL057C	SFA1	P32771	386 aa		3.05	□□□□□ -1.92
NUP120	YKL057C	TIM23	P32897	222 aa		3.05	□□□□□ -1.92
NUP120	YKL057C	SRP101	P32916	621 aa		3.05	□□□□□ -1.92
NUP120	YKL057C	POA1	P38218	177 aa		3.05	□□□□□ -1.92
NUP120	YKL057C	ETP1	P38748	585 aa	Known RBP	3.05	□□□□□ -1.92
NUP120	YKL057C	POL5	P39985	1022 aa	Known RBP	3.05	□□□□□ -1.92
NUP120	YKL057C	SPF1	P39986	1215 aa	Known RBP	3.05	□□□□□ -1.92
NUP120	YKL057C	TAN1	P53072	289 aa	Predicted RBP	3.05	□□□□□ -1.92
NUP120	YKL057C	TOS4	Q06266	489 aa		3.05	□□□□□ -1.92
NUP120	YKL057C	PER1	P25625	357 aa		3.05	□□□□□ -1.92
NUP120	YKL057C	YBR238C	P38330	731 aa	Known RBP	3.05	□□□□□ -1.92
NUP120	YKL057C	RIM11	P38615	370 aa		3.05	□□□□□ -1.92
NUP120	YKL057C	ZRG8	P40021	1076 aa		3.05	□□□□□ -1.92
NUP120	YKL057C	BUD9	P53226	547 aa		3.05	□□□□□ -1.92
NUP120	YKL057C	SDA1	P53313	767 aa	Known RBP	3.05	□□□□□ -1.92
NUP120	YKL057C	RKM2	Q03942	479 aa		3.05	□□□□□ -1.92
NUP120	YKL057C	RRP15	Q06511	250 aa	Predicted RBP	3.05	□□□□□ -1.92
NUP120	YKL057C	SSF2	Q12153	453 aa	Predicted RBP	3.05	□□□□□ -1.92
NUP120	YKL057C	RAD18	P10862	487 aa		3.04	□□□□□ -1.92
NUP120	YKL057C	YSC84	P32793	468 aa		3.04	□□□□□ -1.92
NUP120	YKL057C	DUR3	P33413	735 aa		3.04	□□□□□ -1.92
NUP120	YKL057C	SSY1	Q03770	852 aa		3.04	□□□□□ -1.92
NUP120	YKL057C	RSC3	Q06639	885 aa		3.04	□□□□□ -1.92
NUP120	YKL057C	FMP25	Q08023	583 aa		3.04	□□□□□ -1.92
NUP120	YKL057C	TY1A-NL1	Q12391	440 aa	Known RBP	3.04	□□□□□ -1.92
NUP120	YKL057C	MCX1	P38323	520 aa	Predicted RBP	3.04	□□□□□ -1.92
NUP120	YKL057C	ROT1	Q03691	256 aa		3.04	□□□□□ -1.92
NUP120	YKL057C	DIF1	O13577	133 aa		3.04	□□□□□ -1.92
NUP120	YKL057C	COB	P00163	385 aa		3.04	□□□□□ -1.92
NUP120	YKL057C	FAP7	Q12055	197 aa	Predicted RBP	3.04	□□□□□ -1.92
NUP120	YKL057C	YER152C	P10356	443 aa		3.03	□□□□□ -1.92
NUP120	YKL057C	NGG1	P32494	702 aa		3.03	□□□□□ -1.92
NUP120	YKL057C	GRX7	P38068	203 aa		3.03	□□□□□ -1.92
NUP120	YKL057C	CHZ1	P40019	153 aa	Predicted RBP	3.03	□□□□□ -1.92
NUP120	YKL057C	YIL108W	P40483	696 aa	Known RBP	3.03	□□□□□ -1.92
NUP120	YKL057C	CCM1	P48237	864 aa	Predicted RBP	3.03	□□□□□ -1.92
NUP120	YKL057C	ARI1	P53111	347 aa	Known RBP	3.03	□□□□□ -1.92
NUP120	YKL057C	PBP1	P53297	722 aa	Known RBP	3.03	□□□□□ -1.92
NUP120	YKL057C	CTR9	P89105	1077 aa		3.03	□□□□□ -1.92
NUP120	YKL057C	YKL069W	P36088	180 aa		3.03	□□□□□ -1.92
NUP120	YKL057C	UGA2	P38067	497 aa		3.03	□□□□□ -1.92
NUP120	YKL057C	ENT3	P47160	408 aa		3.03	□□□□□ -1.92
NUP120	YKL057C	REH1	Q06709	432 aa		3.03	□□□□□ -1.92
NUP120	YKL057C	MAG2	Q06436	670 aa	Known RBP	3.02	□□□□□ -1.93
NUP120	YKL057C	ACM1	Q08981	209 aa		3.02	□□□□□ -1.93
NUP120	YKL057C	APT2	P36973	181 aa		3.02	□□□□□ -1.93
NUP120	YKL057C	CRP1	P38845	465 aa	Known RBP	3.02	□□□□□ -1.93
NUP120	YKL057C	RSP5	P39940	809 aa	Known RBP	3.02	□□□□□ -1.93
NUP120	YKL057C	SGO1	Q08490	590 aa		3.02	□□□□□ -1.93
NUP120	YKL057C	PIK1	P39104	1066 aa		3.01	□□□□□ -1.93
NUP120	YKL057C	ALG2	P43636	503 aa		3.01	□□□□□ -1.93
NUP120	YKL057C	MTR3	P48240	250 aa	Predicted RBP	3.01	□□□□□ -1.93
NUP120	YKL057C	ZDS1	P50111	915 aa	Known RBP	3.01	□□□□□ -1.93
NUP120	YKL057C	AI3	P03877	415 aa		3.01	□□□□□ -1.93
NUP120	YKL057C	TYS1	P36421	394 aa	Known RBP	3.01	□□□□□ -1.93
NUP120	YKL057C	PZF1	P39933	429 aa		3.01	□□□□□ -1.93
NUP120	YKL057C	NPY1	P53164	384 aa		3.01	□□□□□ -1.93
NUP120	YKL057C	TFB2	Q02939	513 aa		3.01	□□□□□ -1.93
NUP120	YKL057C	REC104	P33323	182 aa		3	□□□□□ -1.93
NUP120	YKL057C	KTR2	P33550	425 aa		3	□□□□□ -1.93
NUP120	YKL057C	DAM1	P53267	343 aa		3	□□□□□ -1.93
NUP120	YKL057C	UTP14	Q04500	899 aa	Known RBP	3	□□□□□ -1.93
NUP120	YKL057C	YDR215C	Q12240	137 aa		3	□□□□□ -1.93
NUP120	YKL057C	SRO9	P25567	434 aa	Known RBP	3	□□□□□ -1.93
NUP120	YKL057C	RPL8B	P29453	256 aa	Known RBP	3	□□□□□ -1.93
NUP120	YKL057C	PEX6	P33760	1030 aa		3	□□□□□ -1.93
NUP120	YKL057C	NOG1	Q02892	647 aa	Known RBP	3	□□□□□ -1.93
NUP120	YKL057C	YVC1	Q12324	675 aa		3	□□□□□ -1.93
NUP120	YKL057C	SWM1	Q12379	170 aa		3	□□□□□ -1.93
NUP120	YKL057C	NOT3	P06102	836 aa	Known RBP	2.99	□□□□□ -1.93
NUP120	YKL057C	MPH2	P0CD99	609 aa		2.99	□□□□□ -1.93
NUP120	YKL057C	HSF1	P10961	833 aa		2.99	□□□□□ -1.93
NUP120	YKL057C	DAL7	P21826	554 aa		2.99	□□□□□ -1.93
NUP120	YKL057C	SED4	P25365	1065 aa		2.99	□□□□□ -1.93
NUP120	YKL057C	ALG12	P53730	551 aa		2.99	□□□□□ -1.93
NUP120	YKL057C	EEB1	Q02891	456 aa		2.99	□□□□□ -1.93
NUP120	YKL057C	RSC58	Q07979	502 aa		2.99	□□□□□ -1.93
NUP120	YKL057C	ERR1	P0CX10	437 aa		2.99	□□□□□ -1.93
NUP120	YKL057C	ERR2	P0CX11	437 aa		2.99	□□□□□ -1.93
NUP120	YKL057C	CDC48	P25694	835 aa	Known RBP	2.99	□□□□□ -1.93
NUP120	YKL057C	BDF2	Q07442	638 aa		2.99	□□□□□ -1.93
NUP120	YKL057C	NYV1	Q12255	253 aa		2.99	□□□□□ -1.93
NUP120	YKL057C	BI4	P03879	638 aa		2.98	□□□□□ -1.93

Retrieved 100 of 5,963 RNA–protein pairs in 18.6 ms