RNA–Protein interactions for RNA: YHR040W

BCD1, Essential protein required for the accumulation of box C/D snoRNA, yeastyeast

Gene BCD1, Length 1,101 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
BCD1YHR040W RMT2Q03305 412 aa4.02□□□□□ -1.77
BCD1YHR040W TDA6Q06466 467 aa4.02□□□□□ -1.77
BCD1YHR040W SSP2Q08646 371 aa4.02□□□□□ -1.77
BCD1YHR040W SLP1Q12232 587 aa4.02□□□□□ -1.77
BCD1YHR040W PHM7Q12252 991 aa4.02□□□□□ -1.77
BCD1YHR040W FLP1P03870 423 aa4.01□□□□□ -1.77
BCD1YHR040W HXK1P04806 485 aaKnown RBP4.01□□□□□ -1.77
BCD1YHR040W CDC16P09798 840 aa4.01□□□□□ -1.77
BCD1YHR040W PCT1P13259 424 aa4.01□□□□□ -1.77
BCD1YHR040W GRX1P25373 110 aaKnown RBP4.01□□□□□ -1.77
BCD1YHR040W YKL133CP36066 463 aa4.01□□□□□ -1.77
BCD1YHR040W UBP12P39538 1254 aa4.01□□□□□ -1.77
BCD1YHR040W TED1P40533 473 aa4.01□□□□□ -1.77
BCD1YHR040W LEM3P42838 414 aa4.01□□□□□ -1.77
BCD1YHR040W JSN1P47135 1091 aaKnown RBP RIP-Chip data4.01□□□□□ -1.77not detected
BCD1YHR040W YJR124CP47159 448 aa4.01□□□□□ -1.77
BCD1YHR040W CTR9P89105 1077 aa4.01□□□□□ -1.77
BCD1YHR040W NKP2Q06162 153 aa4.01□□□□□ -1.77
BCD1YHR040W SOG2Q08817 791 aa4.01□□□□□ -1.77
BCD1YHR040W PHO8P11491 566 aa4□□□□□ -1.77
BCD1YHR040W OSM1P21375 501 aaKnown RBP4□□□□□ -1.77
BCD1YHR040W YFL066CP43538 392 aa4□□□□□ -1.77
BCD1YHR040W MON1P53129 644 aa4□□□□□ -1.77
BCD1YHR040W NAN1Q02931 896 aaKnown RBP4□□□□□ -1.77
BCD1YHR040W YCS4Q06156 1176 aa4□□□□□ -1.77
BCD1YHR040W YDR306CQ06640 478 aa4□□□□□ -1.77
BCD1YHR040W YLR125WQ12138 136 aa4□□□□□ -1.77
BCD1YHR040W PUS1Q12211 544 aaKnown RBP4□□□□□ -1.77
BCD1YHR040W GIN4Q12263 1142 aa4□□□□□ -1.77
BCD1YHR040W GLO4Q12320 285 aa4□□□□□ -1.77
BCD1YHR040W ENT1Q12518 454 aa4□□□□□ -1.77
BCD1YHR040W VAS1P07806 1104 aaKnown RBP3.99□□□□□ -1.77
BCD1YHR040W RNR2P09938 399 aaKnown RBP3.99□□□□□ -1.77
BCD1YHR040W CDC34P14682 295 aa3.99□□□□□ -1.77
BCD1YHR040W SAC7P17121 654 aa3.99□□□□□ -1.77
BCD1YHR040W TFA2P36145 328 aa3.99□□□□□ -1.77
BCD1YHR040W NUP133P36161 1157 aa3.99□□□□□ -1.77
BCD1YHR040W MCX1P38323 520 aaPredicted RBP3.99□□□□□ -1.77
BCD1YHR040W RRM3P38766 723 aa3.99□□□□□ -1.77
BCD1YHR040W PMC1P38929 1173 aaPredicted RBP3.99□□□□□ -1.77
BCD1YHR040W RVS167P39743 482 aaKnown RBP3.99□□□□□ -1.77
BCD1YHR040W FET4P40988 552 aa3.99□□□□□ -1.77
BCD1YHR040W LSB6P42951 607 aa3.99□□□□□ -1.77
BCD1YHR040W NUT1P53114 1132 aa3.99□□□□□ -1.77
BCD1YHR040W YNR065CP53751 1116 aa3.99□□□□□ -1.77
BCD1YHR040W GDE1Q02979 1223 aa3.99□□□□□ -1.77
BCD1YHR040W YMR187CQ03236 431 aa3.99□□□□□ -1.77
BCD1YHR040W BRE1Q07457 700 aaKnown RBP3.99□□□□□ -1.77
BCD1YHR040W ALE1Q08548 619 aa3.99□□□□□ -1.77
BCD1YHR040W MCD1Q12158 566 aa3.99□□□□□ -1.77
BCD1YHR040W YPR053CQ6Q5F3 151 aa3.99□□□□□ -1.77
BCD1YHR040W TY4B-PA0A0B7P3V8 1104 aa3.98□□□□□ -1.77
BCD1YHR040W COBP00163 385 aa3.98□□□□□ -1.77
BCD1YHR040W NPR1P22211 790 aa3.98□□□□□ -1.77
BCD1YHR040W ROX1P25042 368 aa3.98□□□□□ -1.77
BCD1YHR040W MRC1P25588 1096 aa3.98□□□□□ -1.77
BCD1YHR040W MCM5P29496 775 aaKnown RBP3.98□□□□□ -1.77
BCD1YHR040W RAD24P32641 659 aa3.98□□□□□ -1.77
BCD1YHR040W TIM23P32897 222 aa3.98□□□□□ -1.77
BCD1YHR040W MNN4P36044 1178 aa3.98□□□□□ -1.77
BCD1YHR040W PAN5P38787 379 aa3.98□□□□□ -1.77
BCD1YHR040W FAA3P39002 694 aa3.98□□□□□ -1.77
BCD1YHR040W SPF1P39986 1215 aaKnown RBP3.98□□□□□ -1.77
BCD1YHR040W FAA4P47912 694 aaKnown RBP3.98□□□□□ -1.77
BCD1YHR040W MLC1P53141 149 aa3.98□□□□□ -1.77
BCD1YHR040W DSE4P53753 1117 aa3.98□□□□□ -1.77
BCD1YHR040W ADE16P54113 591 aaKnown RBP3.98□□□□□ -1.77
BCD1YHR040W PKH1Q03407 766 aa3.98□□□□□ -1.77
BCD1YHR040W MSH6Q03834 1242 aa3.98□□□□□ -1.77
BCD1YHR040W SPO71Q03868 1245 aa3.98□□□□□ -1.77
BCD1YHR040W MTC5Q03897 1148 aa3.98□□□□□ -1.77
BCD1YHR040W DAL4Q04895 635 aa3.98□□□□□ -1.77
BCD1YHR040W TDA5Q06417 326 aaKnown RBP3.98□□□□□ -1.77
BCD1YHR040W PMT7Q06644 662 aa3.98□□□□□ -1.77
BCD1YHR040W IMH1Q06704 911 aaKnown RBP3.98□□□□□ -1.77
BCD1YHR040W TY4A-HQ6Q5P6 413 aa3.98□□□□□ -1.77
BCD1YHR040W PDR18P53756 1333 aa3.97□□□□□ -1.77
BCD1YHR040W FKS3Q04952 1785 aa3.97□□□□□ -1.77
BCD1YHR040W PRE9P23638 258 aaKnown RBP3.97□□□□□ -1.77
BCD1YHR040W SSD1P24276 1250 aaKnown RBP RIP-Chip data3.97□□□□□ -1.77 RIP-Chip
BCD1YHR040W PRP40P33203 583 aaKnown RBP3.97□□□□□ -1.77
BCD1YHR040W DUR3P33413 735 aa3.97□□□□□ -1.77
BCD1YHR040W MAC1P35192 417 aa3.97□□□□□ -1.77
BCD1YHR040W GRX7P38068 203 aa3.97□□□□□ -1.77
BCD1YHR040W RIM11P38615 370 aa3.97□□□□□ -1.77
BCD1YHR040W OSH3P38713 996 aaKnown RBP3.97□□□□□ -1.77
BCD1YHR040W YEN1P40028 759 aa3.97□□□□□ -1.77
BCD1YHR040W SPO22P40511 975 aa3.97□□□□□ -1.77
BCD1YHR040W MRPS18P42847 217 aa3.97□□□□□ -1.77
BCD1YHR040W TIM54P47045 478 aa3.97□□□□□ -1.77
BCD1YHR040W YGR053CP53234 283 aa3.97□□□□□ -1.77
BCD1YHR040W HAS1Q03532 505 aaKnown RBP3.97□□□□□ -1.77
BCD1YHR040W TOS4Q06266 489 aa3.97□□□□□ -1.77
BCD1YHR040W OPI10Q08202 246 aa3.97□□□□□ -1.77
BCD1YHR040W ETT1Q08421 412 aaKnown RBP3.97□□□□□ -1.77
BCD1YHR040W CMR1Q12510 522 aaKnown RBP3.97□□□□□ -1.77
BCD1YHR040W RRP5Q05022 1729 aaKnown RBP3.97□□□□□ -1.77
BCD1YHR040W TY4B-HP0C2J7 1802 aa3.97□□□□□ -1.77
BCD1YHR040W TY4B-JP47024 1803 aa3.97□□□□□ -1.77
BCD1YHR040W SRM1P21827 482 aa3.96□□□□□ -1.78
Retrieved 100 of 5,963 RNA–protein pairs in 27.7 ms