RNA–Protein interactions for RNA: YER012W

PRE1, Transcript of Beta 4 subunit of the 20S proteasome, yeastyeast

Gene PRE1, Length 597 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRE1YER012W ESC2Q06340 456 aa5.51□□□□□ -1.53
PRE1YER012W ACM1Q08981 209 aa5.51□□□□□ -1.53
PRE1YER012W TY1B-DR4Q07793 1604 aa5.51□□□□□ -1.53
PRE1YER012W CDC6P09119 513 aa5.5□□□□□ -1.53
PRE1YER012W CDC34P14682 295 aa5.5□□□□□ -1.53
PRE1YER012W LYP1P32487 611 aa5.5□□□□□ -1.53
PRE1YER012W SLA2P33338 968 aa5.5□□□□□ -1.53
PRE1YER012W YGL176CP46945 554 aa5.5□□□□□ -1.53
PRE1YER012W HFM1P51979 1187 aa5.5□□□□□ -1.53
PRE1YER012W TYW3P53177 273 aa5.5□□□□□ -1.53
PRE1YER012W YAP6Q03935 383 aa5.5□□□□□ -1.53
PRE1YER012W RXT3Q07458 294 aa5.5□□□□□ -1.53
PRE1YER012W ACK1Q07622 623 aaPredicted RBP5.5□□□□□ -1.53
PRE1YER012W XYL2Q07993 356 aa5.5□□□□□ -1.53
PRE1YER012W LST4P34239 828 aa5.49□□□□□ -1.53
PRE1YER012W PNT1P38969 423 aa5.49□□□□□ -1.53
PRE1YER012W TMA46Q12000 345 aaKnown RBP5.49□□□□□ -1.53
PRE1YER012W EMC1P25574 760 aa5.48□□□□□ -1.53
PRE1YER012W ATG13Q06628 738 aa5.48□□□□□ -1.53
PRE1YER012W SIP5P40210 489 aaKnown RBP5.47□□□□□ -1.53
PRE1YER012W MCM6P53091 1017 aaKnown RBP5.47□□□□□ -1.53
PRE1YER012W RMD1Q03441 430 aa5.47□□□□□ -1.53
PRE1YER012W MSC2Q03455 724 aa5.47□□□□□ -1.53
PRE1YER012W TUB2P02557 457 aaKnown RBP5.46□□□□□ -1.54
PRE1YER012W ASF1P32447 279 aa5.46□□□□□ -1.54
PRE1YER012W FAA4P47912 694 aaKnown RBP5.46□□□□□ -1.54
PRE1YER012W SIZ1Q04195 904 aa5.46□□□□□ -1.54
PRE1YER012W ENA1P13587 1091 aa5.45□□□□□ -1.54
PRE1YER012W ABD1P32783 436 aaPredicted RBP5.45□□□□□ -1.54
PRE1YER012W YKL107WP34251 309 aa5.45□□□□□ -1.54
PRE1YER012W GEM1P39722 662 aa5.45□□□□□ -1.54
PRE1YER012W MTC3P53077 123 aa5.45□□□□□ -1.54
PRE1YER012W PBP1P53297 722 aaKnown RBP5.45□□□□□ -1.54
PRE1YER012W ENA2Q01896 1091 aa5.45□□□□□ -1.54
PRE1YER012W ENA5Q12691 1091 aa5.45□□□□□ -1.54
PRE1YER012W DOM34P33309 386 aa5.44□□□□□ -1.54
PRE1YER012W YKL151CP36059 337 aa5.44□□□□□ -1.54
PRE1YER012W VPS62P53285 467 aa5.44□□□□□ -1.54
PRE1YER012W YLR224WQ05947 369 aa5.44□□□□□ -1.54
PRE1YER012W HMI1Q12039 706 aa5.44□□□□□ -1.54
PRE1YER012W MET10P39692 1035 aa5.43□□□□□ -1.54
PRE1YER012W ZRG8P40021 1076 aa5.43□□□□□ -1.54
PRE1YER012W MND2P40577 368 aa5.43□□□□□ -1.54
PRE1YER012W PHO23P50947 330 aa5.43□□□□□ -1.54
PRE1YER012W HRQ1Q05549 1077 aa5.43□□□□□ -1.54
PRE1YER012W RKM4Q12504 494 aa5.43□□□□□ -1.54
PRE1YER012W HCM1P25364 564 aa5.42□□□□□ -1.54
PRE1YER012W RRT14P40470 206 aa5.42□□□□□ -1.54
PRE1YER012W GDE1Q02979 1223 aa5.42□□□□□ -1.54
PRE1YER012W TPO1Q07824 586 aa5.42□□□□□ -1.54
PRE1YER012W PLB1P39105 664 aa5.41□□□□□ -1.54
PRE1YER012W SPO20Q04359 397 aa5.41□□□□□ -1.54
PRE1YER012W MBP1P39678 833 aa5.4□□□□□ -1.54
PRE1YER012W MNN10P50108 393 aaKnown RBP5.4□□□□□ -1.54
PRE1YER012W SRP101P32916 621 aa5.39□□□□□ -1.55
PRE1YER012W MNR2P35724 969 aa5.39□□□□□ -1.55
PRE1YER012W POA1P38218 177 aa5.39□□□□□ -1.55
PRE1YER012W YAP1801P38856 637 aa5.39□□□□□ -1.55
PRE1YER012W YGR053CP53234 283 aa5.39□□□□□ -1.55
PRE1YER012W SUN4P53616 420 aa5.39□□□□□ -1.55
PRE1YER012W MDM38Q08179 573 aa5.39□□□□□ -1.55
PRE1YER012W OSW2Q12202 724 aa5.39□□□□□ -1.55
PRE1YER012W TCB3Q03640 1545 aaKnown RBP5.38□□□□□ -1.55
PRE1YER012W THS1P04801 734 aaKnown RBP5.38□□□□□ -1.55
PRE1YER012W TRM2P33753 639 aa5.38□□□□□ -1.55
PRE1YER012W NPP2P39997 493 aa5.38□□□□□ -1.55
PRE1YER012W GSF2Q04697 403 aaKnown RBP5.38□□□□□ -1.55
PRE1YER012W PNS1Q12412 539 aa5.38□□□□□ -1.55
PRE1YER012W PRI2P20457 528 aa5.37□□□□□ -1.55
PRE1YER012W GIC1P38785 314 aa5.37□□□□□ -1.55
PRE1YER012W SAH1P39954 449 aaKnown RBP5.37□□□□□ -1.55
PRE1YER012W ADY3Q07732 790 aa5.37□□□□□ -1.55
PRE1YER012W NOP12Q08208 459 aaKnown RBP5.37□□□□□ -1.55
PRE1YER012W FAL1Q12099 399 aaKnown RBP5.37□□□□□ -1.55
PRE1YER012W NTO1Q12311 748 aa5.37□□□□□ -1.55
PRE1YER012W KOG1P38873 1557 aa5.37□□□□□ -1.55
PRE1YER012W STE11P23561 717 aa5.36□□□□□ -1.55
PRE1YER012W SLI1P53304 468 aa5.36□□□□□ -1.55
PRE1YER012W CWC24P53769 259 aa5.36□□□□□ -1.55
PRE1YER012W PUS9Q12069 462 aa5.36□□□□□ -1.55
PRE1YER012W YKL069WP36088 180 aa5.35□□□□□ -1.55
PRE1YER012W MET12P46151 657 aa5.35□□□□□ -1.55
PRE1YER012W MSE1P48525 536 aa5.35□□□□□ -1.55
PRE1YER012W YGR012WP53206 393 aa5.35□□□□□ -1.55
PRE1YER012W SFB2P53953 876 aa5.35□□□□□ -1.55
PRE1YER012W SRT1Q03175 343 aa5.35□□□□□ -1.55
PRE1YER012W JIP5Q06214 492 aaPredicted RBP5.35□□□□□ -1.55
PRE1YER012W CDA1Q06702 301 aa5.35□□□□□ -1.55
PRE1YER012W WHI4Q07655 649 aaKnown RBP5.35□□□□□ -1.55
PRE1YER012W MAD1P40957 749 aa5.34□□□□□ -1.55
PRE1YER012W SGS1P35187 1447 aa5.33□□□□□ -1.56
PRE1YER012W HIS5P07172 385 aa5.33□□□□□ -1.56
PRE1YER012W PIN4P34217 668 aaKnown RBP RIP-Chip data5.33□□□□□ -1.56not detected
PRE1YER012W ECM21P38167 1117 aaKnown RBP5.33□□□□□ -1.56
PRE1YER012W PMA1P05030 918 aaKnown RBP5.32□□□□□ -1.56
PRE1YER012W SPE1P08432 466 aa5.32□□□□□ -1.56
PRE1YER012W AIM21P40563 679 aa5.32□□□□□ -1.56
PRE1YER012W KIN4Q01919 800 aa5.32□□□□□ -1.56
PRE1YER012W VPS16Q03308 798 aa5.32□□□□□ -1.56
PRE1YER012W DUS3Q06053 668 aaKnown RBP5.32□□□□□ -1.56
Retrieved 100 of 5,963 RNA–protein pairs in 24.4 ms