RNA–Protein interactions for RNA: YDR188W

CCT6, Transcript of Subunit of the cytosolic chaperonin Cct ring complex, yeast

Gene CCT6, Length 1,641 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CCT6	YDR188W	ERP3	Q12403	225 aa		13.86	□□□□□ -0.19
CCT6	YDR188W	TKL1	P23254	680 aa	Known RBP	13.86	□□□□□ -0.19
CCT6	YDR188W	PSO2	P30620	661 aa		13.86	□□□□□ -0.19
CCT6	YDR188W	REG2	P38232	338 aa		13.86	□□□□□ -0.19
CCT6	YDR188W	YGL039W	P53183	348 aa	Known RBP	13.86	□□□□□ -0.19
CCT6	YDR188W	SRD1	P09007	221 aa		13.85	□□□□□ -0.19
CCT6	YDR188W	OM45	P16547	393 aa		13.85	□□□□□ -0.19
CCT6	YDR188W	ZPR1	P53303	486 aa	Known RBP	13.85	□□□□□ -0.19
CCT6	YDR188W	DUS4	Q06063	367 aa		13.85	□□□□□ -0.19
CCT6	YDR188W	YPL216W	Q08964	1102 aa		13.85	□□□□□ -0.19
CCT6	YDR188W	TY3A-G	Q12173	290 aa		13.85	□□□□□ -0.19
CCT6	YDR188W	TY3A-I	Q99219	290 aa		13.85	□□□□□ -0.19
CCT6	YDR188W	YKL091C	P33324	310 aa	Known RBP	13.84	□□□□□ -0.19
CCT6	YDR188W	EBP2	P36049	427 aa	Known RBP	13.84	□□□□□ -0.19
CCT6	YDR188W	VPS29	P38759	282 aa		13.84	□□□□□ -0.19
CCT6	YDR188W	MGA2	P40578	1113 aa		13.84	□□□□□ -0.19
CCT6	YDR188W	UBP15	P50101	1230 aa		13.84	□□□□□ -0.19
CCT6	YDR188W	MRC1	P25588	1096 aa		13.83	□□□□□ -0.2
CCT6	YDR188W	ETP1	P38748	585 aa	Known RBP	13.83	□□□□□ -0.2
CCT6	YDR188W	ULP2	P40537	1034 aa	Predicted RBP	13.83	□□□□□ -0.2
CCT6	YDR188W	EBS1	Q03466	884 aa	Known RBP	13.83	□□□□□ -0.2
CCT6	YDR188W	SEC8	P32855	1065 aa		13.82	□□□□□ -0.2
CCT6	YDR188W	SAP190	P36123	1033 aa		13.82	□□□□□ -0.2
CCT6	YDR188W	RPN3	P40016	523 aa	Known RBP	13.82	□□□□□ -0.2
CCT6	YDR188W	ATG1	P53104	897 aa		13.82	□□□□□ -0.2
CCT6	YDR188W	SEC5	P89102	971 aa		13.82	□□□□□ -0.2
CCT6	YDR188W	PRP22	P24384	1145 aa	Known RBP	13.82	□□□□□ -0.2
CCT6	YDR188W	SPT8	P38915	602 aa		13.82	□□□□□ -0.2
CCT6	YDR188W	MSH3	P25336	1018 aa		13.81	□□□□□ -0.2
CCT6	YDR188W	MOT2	P34909	587 aa	Known RBP	13.81	□□□□□ -0.2
CCT6	YDR188W	YET1	P35723	206 aa		13.81	□□□□□ -0.2
CCT6	YDR188W	AIP1	P46680	615 aa	Known RBP	13.81	□□□□□ -0.2
CCT6	YDR188W	YOL075C	Q08234	1294 aa		13.81	□□□□□ -0.2
CCT6	YDR188W	TIF6	Q12522	245 aa	Known RBP	13.81	□□□□□ -0.2
CCT6	YDR188W	CDC48	P25694	835 aa	Known RBP	13.8	□□□□□ -0.2
CCT6	YDR188W	HMF1	P40037	129 aa	Known RBP	13.8	□□□□□ -0.2
CCT6	YDR188W	FIS1	P40515	155 aa		13.8	□□□□□ -0.2
CCT6	YDR188W	YFL034W	P43564	1073 aa		13.8	□□□□□ -0.2
CCT6	YDR188W	TFC4	P33339	1025 aa		13.79	□□□□□ -0.2
CCT6	YDR188W	CYC8	P14922	966 aa		13.79	□□□□□ -0.2
CCT6	YDR188W	TOS3	P43637	560 aa		13.79	□□□□□ -0.2
CCT6	YDR188W	YDL057W	Q07379	328 aa		13.79	□□□□□ -0.2
CCT6	YDR188W	YAP7	Q08182	245 aa		13.79	□□□□□ -0.2
CCT6	YDR188W	MSC6	Q08818	692 aa	Known RBP	13.79	□□□□□ -0.2
CCT6	YDR188W	BIM1	P40013	344 aa		13.78	□□□□□ -0.2
CCT6	YDR188W	FYV8	P46949	817 aa	Known RBP	13.78	□□□□□ -0.2
CCT6	YDR188W	TOF1	P53840	1238 aa		13.78	□□□□□ -0.2
CCT6	YDR188W	VPS75	P53853	264 aa		13.78	□□□□□ -0.2
CCT6	YDR188W	NCS2	P53923	493 aa	Predicted RBP	13.78	□□□□□ -0.2
CCT6	YDR188W	YLR225C	Q05948	407 aa	Known RBP	13.78	□□□□□ -0.2
CCT6	YDR188W	YDR461C-A	Q2V2P7	80 aa		13.78	□□□□□ -0.2
CCT6	YDR188W	TCP1	P12612	559 aa	Known RBP	13.77	□□□□□ -0.21
CCT6	YDR188W	ATG19	P35193	415 aa		13.77	□□□□□ -0.21
CCT6	YDR188W	DBP7	P36120	742 aa	Known RBP	13.77	□□□□□ -0.21
CCT6	YDR188W	TVP38	P36164	337 aa		13.77	□□□□□ -0.21
CCT6	YDR188W	CTM1	P38818	585 aa		13.77	□□□□□ -0.21
CCT6	YDR188W	HUL4	P40985	892 aa		13.77	□□□□□ -0.21
CCT6	YDR188W	VPS53	P47061	822 aa		13.77	□□□□□ -0.21
CCT6	YDR188W	PDC1	P06169	563 aa	Known RBP	13.76	□□□□□ -0.21
CCT6	YDR188W	RGT1	P32862	1170 aa		13.76	□□□□□ -0.21
CCT6	YDR188W	NBP1	P52919	319 aa	Predicted RBP	13.76	□□□□□ -0.21
CCT6	YDR188W	YMR321C	Q04898	105 aa		13.76	□□□□□ -0.21
CCT6	YDR188W	MAK16	P10962	306 aa	Predicted RBP	13.75	□□□□□ -0.21
CCT6	YDR188W	SEC65	P29478	273 aa		13.75	□□□□□ -0.21
CCT6	YDR188W	MRF1	P30775	413 aa	Predicted RBP	13.75	□□□□□ -0.21
CCT6	YDR188W	PGM2	P37012	569 aa	Known RBP	13.75	□□□□□ -0.21
CCT6	YDR188W	YPL277C	Q08989	487 aa		13.75	□□□□□ -0.21
CCT6	YDR188W	PCK1	P10963	549 aa		13.75	□□□□□ -0.21
CCT6	YDR188W	DBP5	P20449	482 aa	Known RBP	13.75	□□□□□ -0.21
CCT6	YDR188W	DAL7	P21826	554 aa		13.75	□□□□□ -0.21
CCT6	YDR188W	RPC53	P25441	422 aa		13.75	□□□□□ -0.21
CCT6	YDR188W	SPO75	Q07798	868 aa		13.75	□□□□□ -0.21
CCT6	YDR188W	SMC5	Q08204	1093 aa		13.75	□□□□□ -0.21
CCT6	YDR188W	MET7	Q08645	548 aa		13.75	□□□□□ -0.21
CCT6	YDR188W	TCO89	Q08921	799 aa		13.75	□□□□□ -0.21
CCT6	YDR188W	YLL058W	Q12198	575 aa		13.75	□□□□□ -0.21
CCT6	YDR188W	MED1	Q12321	566 aa		13.75	□□□□□ -0.21
CCT6	YDR188W	TRM11	Q12463	433 aa		13.75	□□□□□ -0.21
CCT6	YDR188W	RPS6A	P0CX37	236 aa	Known RBP	13.74	□□□□□ -0.21
CCT6	YDR188W	RPS6B	P0CX38	236 aa	Predicted RBP	13.74	□□□□□ -0.21
CCT6	YDR188W	PHO13	P19881	312 aa		13.74	□□□□□ -0.21
CCT6	YDR188W	RPC25	P35718	212 aa		13.74	□□□□□ -0.21
CCT6	YDR188W	UBP13	P38187	747 aa		13.74	□□□□□ -0.21
CCT6	YDR188W	LEO1	P38439	464 aa		13.74	□□□□□ -0.21
CCT6	YDR188W	MIP6	P38760	659 aa	Known RBP	13.74	□□□□□ -0.21
CCT6	YDR188W	VID30	P53076	958 aa		13.74	□□□□□ -0.21
CCT6	YDR188W	GPI13	Q07830	1017 aa		13.74	□□□□□ -0.21
CCT6	YDR188W	NCR1	Q12200	1170 aa		13.74	□□□□□ -0.21
CCT6	YDR188W	YUR1	P26725	428 aa		13.73	□□□□□ -0.21
CCT6	YDR188W	MFT1	P33441	392 aa	Known RBP	13.73	□□□□□ -0.21
CCT6	YDR188W	MXR1	P40029	184 aa		13.73	□□□□□ -0.21
CCT6	YDR188W	RPS7B	P48164	190 aa	Known RBP	13.73	□□□□□ -0.21
CCT6	YDR188W	CCM1	P48237	864 aa	Predicted RBP	13.73	□□□□□ -0.21
CCT6	YDR188W	COG4	Q06096	861 aa		13.73	□□□□□ -0.21
CCT6	YDR188W	PRE10	P21242	288 aa	Known RBP RIP-Chip data	13.72	□□□□□ -0.21	not detected
CCT6	YDR188W	TRK2	P28584	889 aa		13.72	□□□□□ -0.21
CCT6	YDR188W	YEL025C	P39991	1188 aa		13.72	□□□□□ -0.21
CCT6	YDR188W	MDR1	P53258	950 aa		13.72	□□□□□ -0.21
CCT6	YDR188W	ARK1	P53974	638 aa		13.72	□□□□□ -0.21
CCT6	YDR188W	NOC3	Q07896	663 aa	Predicted RBP	13.72	□□□□□ -0.21

Retrieved 100 of 5,963 RNA–protein pairs in 16.1 ms