RNA–Protein interactions for RNA: YDR182W

CDC1, Transcript of Putative lipid phosphatase of the endoplasmic reticulum, yeast

Gene CDC1, Length 1,476 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CDC1	YDR182W	YML020W	Q03722	664 aa		7.3	□□□□□ -1.24
CDC1	YDR182W	EMI2	Q04409	500 aa	Known RBP	7.3	□□□□□ -1.24
CDC1	YDR182W	TRL1	P09880	827 aa	Known RBP	7.29	□□□□□ -1.24
CDC1	YDR182W	SEC61	P32915	480 aa		7.29	□□□□□ -1.24
CDC1	YDR182W	SAS3	P34218	831 aa		7.29	□□□□□ -1.24
CDC1	YDR182W	POA1	P38218	177 aa		7.29	□□□□□ -1.24
CDC1	YDR182W	YGL138C	P53122	345 aa		7.29	□□□□□ -1.24
CDC1	YDR182W	NCR1	Q12200	1170 aa		7.29	□□□□□ -1.24
CDC1	YDR182W	PGK1	P00560	416 aa	Known RBP	7.28	□□□□□ -1.24
CDC1	YDR182W	VPS1	P21576	704 aa	Known RBP	7.28	□□□□□ -1.24
CDC1	YDR182W	MSS51	P32335	436 aa		7.28	□□□□□ -1.24
CDC1	YDR182W	BMH2	P34730	273 aa	Known RBP	7.28	□□□□□ -1.24
CDC1	YDR182W	DID4	P36108	232 aa		7.28	□□□□□ -1.24
CDC1	YDR182W	DRE2	P36152	348 aa		7.28	□□□□□ -1.24
CDC1	YDR182W	RPN10	P38886	268 aa	Known RBP	7.28	□□□□□ -1.24
CDC1	YDR182W	GAA1	P39012	614 aa		7.28	□□□□□ -1.24
CDC1	YDR182W	SPO74	P45819	413 aa		7.28	□□□□□ -1.24
CDC1	YDR182W	YKE2	P52553	114 aa		7.28	□□□□□ -1.24
CDC1	YDR182W	ZPR1	P53303	486 aa	Known RBP	7.28	□□□□□ -1.24
CDC1	YDR182W	DIP5	P53388	608 aa		7.28	□□□□□ -1.24
CDC1	YDR182W	DSE4	P53753	1117 aa		7.28	□□□□□ -1.24
CDC1	YDR182W	GDE1	Q02979	1223 aa		7.28	□□□□□ -1.24
CDC1	YDR182W	YDR090C	Q03193	310 aa		7.28	□□□□□ -1.24
CDC1	YDR182W	MATALPHA2	P0CY08	210 aa		7.27	□□□□□ -1.25
CDC1	YDR182W	HMLALPHA2	P0CY09	210 aa		7.27	□□□□□ -1.25
CDC1	YDR182W	UBC1	P21734	215 aa	Known RBP	7.27	□□□□□ -1.25
CDC1	YDR182W	FUB1	P25659	250 aa		7.27	□□□□□ -1.25
CDC1	YDR182W	DSF2	P38213	736 aa		7.27	□□□□□ -1.25
CDC1	YDR182W	FMP10	P40098	244 aa		7.27	□□□□□ -1.25
CDC1	YDR182W	GPD2	P41911	440 aa	Known RBP	7.27	□□□□□ -1.25
CDC1	YDR182W	ACF4	P47129	309 aa		7.27	□□□□□ -1.25
CDC1	YDR182W	ENT3	P47160	408 aa		7.27	□□□□□ -1.25
CDC1	YDR182W	PHM6	Q05637	104 aa		7.27	□□□□□ -1.25
CDC1	YDR182W	COX6	P00427	148 aa		7.26	□□□□□ -1.25
CDC1	YDR182W	SUP45	P12385	437 aa	Known RBP	7.26	□□□□□ -1.25
CDC1	YDR182W	BRE2	P43132	505 aa		7.26	□□□□□ -1.25
CDC1	YDR182W	YGR035C	P53222	116 aa		7.26	□□□□□ -1.25
CDC1	YDR182W	MDR1	P53258	950 aa		7.26	□□□□□ -1.25
CDC1	YDR182W	TPO2	P53283	614 aa		7.26	□□□□□ -1.25
CDC1	YDR182W	CUS1	Q02554	436 aa	Predicted RBP	7.26	□□□□□ -1.25
CDC1	YDR182W	CDC6	P09119	513 aa		7.25	□□□□□ -1.25
CDC1	YDR182W	GSY1	P23337	708 aa		7.25	□□□□□ -1.25
CDC1	YDR182W	SRO9	P25567	434 aa	Known RBP	7.25	□□□□□ -1.25
CDC1	YDR182W	URK1	P27515	501 aa		7.25	□□□□□ -1.25
CDC1	YDR182W	SUV3	P32580	737 aa		7.25	□□□□□ -1.25
CDC1	YDR182W	RAD54	P32863	898 aa		7.25	□□□□□ -1.25
CDC1	YDR182W	PGM1	P33401	570 aa	Known RBP	7.25	□□□□□ -1.25
CDC1	YDR182W	INP52	P50942	1183 aa		7.25	□□□□□ -1.25
CDC1	YDR182W	CNM67	P53865	581 aa	Known RBP	7.25	□□□□□ -1.25
CDC1	YDR182W	MUK1	Q02866	612 aa		7.25	□□□□□ -1.25
CDC1	YDR182W	CSM3	Q04659	317 aa		7.25	□□□□□ -1.25
CDC1	YDR182W	AIR2	Q12476	344 aa	Known RBP	7.25	□□□□□ -1.25
CDC1	YDR182W	DED1	P06634	604 aa	Known RBP	7.24	□□□□□ -1.25
CDC1	YDR182W	SPT2	P06843	333 aa	Predicted RBP	7.24	□□□□□ -1.25
CDC1	YDR182W	RME1	P32338	300 aa	Known RBP	7.24	□□□□□ -1.25
CDC1	YDR182W	KIC1	P38692	1080 aa		7.24	□□□□□ -1.25
CDC1	YDR182W	TFG1	P41895	735 aa	Predicted RBP	7.24	□□□□□ -1.25
CDC1	YDR182W	NAF1	P53919	492 aa	Known RBP	7.24	□□□□□ -1.25
CDC1	YDR182W	MFM1	Q02783	413 aa		7.24	□□□□□ -1.25
CDC1	YDR182W	PNG1	Q02890	363 aa		7.24	□□□□□ -1.25
CDC1	YDR182W	TRS120	Q04183	1289 aa		7.24	□□□□□ -1.25
CDC1	YDR182W	MAG2	Q06436	670 aa	Known RBP	7.24	□□□□□ -1.25
CDC1	YDR182W	CLN3	P13365	580 aa		7.24	□□□□□ -1.25
CDC1	YDR182W	OPY1	P38271	328 aa		7.24	□□□□□ -1.25
CDC1	YDR182W	ULP2	P40537	1034 aa	Predicted RBP	7.24	□□□□□ -1.25
CDC1	YDR182W	OPT1	P40897	799 aa		7.24	□□□□□ -1.25
CDC1	YDR182W	RET3	P53600	189 aa		7.24	□□□□□ -1.25
CDC1	YDR182W	PRC1	P00729	532 aa		7.23	□□□□□ -1.25
CDC1	YDR182W	EFT1	P32324	842 aa	Known RBP	7.23	□□□□□ -1.25
CDC1	YDR182W	EAF5	P39995	279 aa		7.23	□□□□□ -1.25
CDC1	YDR182W	ATG32	P40458	529 aa		7.23	□□□□□ -1.25
CDC1	YDR182W	GCV2	P49095	1034 aa		7.23	□□□□□ -1.25
CDC1	YDR182W	MET13	P53128	600 aa		7.23	□□□□□ -1.25
CDC1	YDR182W	SKY1	Q03656	742 aa		7.23	□□□□□ -1.25
CDC1	YDR182W	PML39	Q03760	334 aa		7.23	□□□□□ -1.25
CDC1	YDR182W	YLR407W	Q06070	228 aa		7.23	□□□□□ -1.25
CDC1	YDR182W	MSD1	P15179	658 aa	Known RBP	7.22	□□□□□ -1.25
CDC1	YDR182W	THR4	P16120	514 aa	Known RBP	7.22	□□□□□ -1.25
CDC1	YDR182W	FIS1	P40515	155 aa		7.22	□□□□□ -1.25
CDC1	YDR182W	FAF1	P40546	346 aa	Predicted RBP	7.22	□□□□□ -1.25
CDC1	YDR182W	BUD6	P41697	788 aa		7.22	□□□□□ -1.25
CDC1	YDR182W	CTF18	P49956	741 aa		7.22	□□□□□ -1.25
CDC1	YDR182W	HEH2	Q03281	663 aa		7.22	□□□□□ -1.25
CDC1	YDR182W	YLH47	Q06493	454 aa		7.22	□□□□□ -1.25
CDC1	YDR182W	SLK19	Q08581	821 aa	Known RBP	7.22	□□□□□ -1.25
CDC1	YDR182W	HSP82	P02829	709 aa	Known RBP	7.21	□□□□□ -1.26
CDC1	YDR182W	IDI1	P15496	288 aa		7.21	□□□□□ -1.26
CDC1	YDR182W	SLX1	P38324	304 aa		7.21	□□□□□ -1.26
CDC1	YDR182W	STT3	P39007	718 aa	Known RBP	7.21	□□□□□ -1.26
CDC1	YDR182W	YGL081W	P53156	320 aa		7.21	□□□□□ -1.26
CDC1	YDR182W	PGA2	P53903	129 aa		7.21	□□□□□ -1.26
CDC1	YDR182W	COQ9	Q05779	260 aa		7.21	□□□□□ -1.26
CDC1	YDR182W	SMC5	Q08204	1093 aa		7.21	□□□□□ -1.26
CDC1	YDR182W	DAP1	Q12091	152 aa		7.21	□□□□□ -1.26
CDC1	YDR182W	CEX1	Q12453	761 aa		7.21	□□□□□ -1.26
CDC1	YDR182W	RLF2	Q12495	606 aa		7.21	□□□□□ -1.26
CDC1	YDR182W	TUF1	P02992	437 aa	Known RBP	7.2	□□□□□ -1.26
CDC1	YDR182W	SRD1	P09007	221 aa		7.2	□□□□□ -1.26
CDC1	YDR182W	AVT1	P47082	602 aa		7.2	□□□□□ -1.26
CDC1	YDR182W	YNL034W	P53963	612 aa		7.2	□□□□□ -1.26

Retrieved 100 of 5,963 RNA–protein pairs in 13 ms