RNA–Protein interactions for RNA: YCL001W

RER1, Transcript of Protein involved in retention of membrane proteins, yeastyeast

Gene RER1, Length 567 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RER1YCL001W SLD2P34252 453 aa6.83□□□□□ -1.32
RER1YCL001W PIK1P39104 1066 aa6.83□□□□□ -1.32
RER1YCL001W MET10P39692 1035 aa6.83□□□□□ -1.32
RER1YCL001W SIW14P53965 281 aa6.83□□□□□ -1.32
RER1YCL001W ROD1Q02805 837 aa6.83□□□□□ -1.32
RER1YCL001W RAD2P07276 1031 aa6.82□□□□□ -1.32
RER1YCL001W YDR132CQ03900 495 aa6.82□□□□□ -1.32
RER1YCL001W SPO21Q12411 609 aa6.82□□□□□ -1.32
RER1YCL001W MLP2P40457 1679 aa6.81□□□□□ -1.32
RER1YCL001W CYC8P14922 966 aa6.81□□□□□ -1.32
RER1YCL001W SEC26P41810 973 aaKnown RBP6.81□□□□□ -1.32
RER1YCL001W RAT1Q02792 1006 aaKnown RBP6.81□□□□□ -1.32
RER1YCL001W MMS1Q06211 1407 aa6.81□□□□□ -1.32
RER1YCL001W ULS1Q08562 1619 aa6.8□□□□□ -1.32
RER1YCL001W MKK2P32491 506 aa6.8□□□□□ -1.32
RER1YCL001W GNP1P48813 663 aa6.8□□□□□ -1.32
RER1YCL001W HXT13P39924 564 aa6.79□□□□□ -1.32
RER1YCL001W RPS26AP39938 119 aaKnown RBP6.79□□□□□ -1.32
RER1YCL001W RPS26BP39939 119 aaKnown RBP6.79□□□□□ -1.32
RER1YCL001W HNT2P49775 206 aa6.79□□□□□ -1.32
RER1YCL001W HXT17P53631 564 aa6.79□□□□□ -1.32
RER1YCL001W HXT15P54854 567 aa6.79□□□□□ -1.32
RER1YCL001W SGD1Q06132 899 aa6.79□□□□□ -1.32
RER1YCL001W RSB1Q08417 382 aa6.79□□□□□ -1.32
RER1YCL001W NUP170P38181 1502 aa6.79□□□□□ -1.32
RER1YCL001W IRC20Q06554 1556 aa6.78□□□□□ -1.32
RER1YCL001W SPO14P36126 1683 aa6.78□□□□□ -1.32
RER1YCL001W SEC8P32855 1065 aa6.78□□□□□ -1.32
RER1YCL001W MGE1P38523 228 aa6.78□□□□□ -1.32
RER1YCL001W GDB1Q06625 1536 aa6.77□□□□□ -1.33
RER1YCL001W PRE10P21242 288 aaKnown RBP RIP-Chip data6.77□□□□□ -1.33not detected
RER1YCL001W PUF4P25339 888 aaKnown RBP RIP-Chip data6.77□□□□□ -1.33not detected
RER1YCL001W ABZ1P37254 787 aaPredicted RBP6.77□□□□□ -1.33
RER1YCL001W RGD1P38339 666 aa6.77□□□□□ -1.33
RER1YCL001W YOR352WQ08816 343 aa6.77□□□□□ -1.33
RER1YCL001W PDR15Q04182 1529 aaKnown RBP6.76□□□□□ -1.33
RER1YCL001W YLR358CO13565 187 aa6.76□□□□□ -1.33
RER1YCL001W LAM1P38851 1228 aa6.76□□□□□ -1.33
RER1YCL001W POL32P47110 350 aa6.76□□□□□ -1.33
RER1YCL001W CLU1Q03690 1277 aaKnown RBP6.76□□□□□ -1.33
RER1YCL001W CYC1P00044 109 aaPredicted RBP6.75□□□□□ -1.33
RER1YCL001W MCM2P29469 868 aa6.75□□□□□ -1.33
RER1YCL001W MEF2P39677 819 aa6.75□□□□□ -1.33
RER1YCL001W YJR107WP47145 328 aa6.75□□□□□ -1.33
RER1YCL001W GCN5Q03330 439 aa6.75□□□□□ -1.33
RER1YCL001W MRL1Q06815 381 aa6.75□□□□□ -1.33
RER1YCL001W TRM3Q07527 1436 aa6.75□□□□□ -1.33
RER1YCL001W IQG1Q12280 1495 aa6.74□□□□□ -1.33
RER1YCL001W SYP1P25623 870 aaKnown RBP6.74□□□□□ -1.33
RER1YCL001W GCR1P07261 785 aa6.73□□□□□ -1.33
RER1YCL001W ATE1P16639 503 aa6.73□□□□□ -1.33
RER1YCL001W DBP5P20449 482 aaKnown RBP6.73□□□□□ -1.33
RER1YCL001W YFL054CP43549 646 aa6.73□□□□□ -1.33
RER1YCL001W CNN1P43618 361 aa6.73□□□□□ -1.33
RER1YCL001W SPT20P50875 604 aa6.73□□□□□ -1.33
RER1YCL001W BUD3P25558 1636 aa6.72□□□□□ -1.33
RER1YCL001W NUP157P40064 1391 aaKnown RBP6.72□□□□□ -1.33
RER1YCL001W YER152CP10356 443 aa6.72□□□□□ -1.33
RER1YCL001W RRP15Q06511 250 aaPredicted RBP6.72□□□□□ -1.33
RER1YCL001W DNF2Q12675 1612 aa6.72□□□□□ -1.33
RER1YCL001W PDR10P51533 1564 aa6.71□□□□□ -1.34
RER1YCL001W CTS1P29029 562 aa6.71□□□□□ -1.34
RER1YCL001W MLS1P30952 554 aa6.71□□□□□ -1.34
RER1YCL001W RFC5P38251 354 aa6.71□□□□□ -1.34
RER1YCL001W RSM24Q03976 319 aa6.71□□□□□ -1.34
RER1YCL001W SPR28Q04921 423 aa6.71□□□□□ -1.34
RER1YCL001W FYV10P40492 516 aa6.7□□□□□ -1.34
RER1YCL001W MPH1P40562 993 aa6.7□□□□□ -1.34
RER1YCL001W PLB2Q03674 706 aa6.7□□□□□ -1.34
RER1YCL001W ROT1Q03691 256 aa6.7□□□□□ -1.34
RER1YCL001W GIS1Q03833 894 aa6.7□□□□□ -1.34
RER1YCL001W DUS4Q06063 367 aa6.7□□□□□ -1.34
RER1YCL001W DOP1Q03921 1698 aa6.7□□□□□ -1.34
RER1YCL001W CAT8P39113 1433 aa6.69□□□□□ -1.34
RER1YCL001W DOM34P33309 386 aa6.69□□□□□ -1.34
RER1YCL001W TAT2P38967 592 aa6.69□□□□□ -1.34
RER1YCL001W GSF2Q04697 403 aaKnown RBP6.69□□□□□ -1.34
RER1YCL001W ESF1Q06344 628 aaKnown RBP6.69□□□□□ -1.34
RER1YCL001W RIB2Q12362 591 aaKnown RBP6.69□□□□□ -1.34
RER1YCL001W GAL10P04397 699 aa6.68□□□□□ -1.34
RER1YCL001W SRM1P21827 482 aa6.68□□□□□ -1.34
RER1YCL001W SHM2P37291 469 aaKnown RBP6.68□□□□□ -1.34
RER1YCL001W GEA1P47102 1408 aaPredicted RBP6.67□□□□□ -1.34
RER1YCL001W CMP2P14747 604 aa6.67□□□□□ -1.34
RER1YCL001W ATG13Q06628 738 aa6.67□□□□□ -1.34
RER1YCL001W SVS1Q12254 260 aa6.67□□□□□ -1.34
RER1YCL001W KIN2P13186 1147 aaKnown RBP6.66□□□□□ -1.34
RER1YCL001W RER2P35196 286 aa6.66□□□□□ -1.34
RER1YCL001W MPT5P39016 859 aaKnown RBP RIP-Chip data6.66□□□□□ -1.34not detected
RER1YCL001W YML020WQ03722 664 aa6.66□□□□□ -1.34
RER1YCL001W SIZ1Q04195 904 aa6.66□□□□□ -1.34
RER1YCL001W TY3B-GQ99315 1547 aa6.66□□□□□ -1.34
RER1YCL001W RAD27P26793 382 aa6.65□□□□□ -1.34
RER1YCL001W TIF35Q04067 274 aaKnown RBP6.65□□□□□ -1.34
RER1YCL001W NOP8Q08287 484 aaPredicted RBP6.65□□□□□ -1.34
RER1YCL001W RTT10Q08924 1013 aa6.65□□□□□ -1.34
RER1YCL001W BAS1P22035 811 aa6.64□□□□□ -1.35
RER1YCL001W CDC20P26309 610 aa6.64□□□□□ -1.35
RER1YCL001W HEM3P28789 327 aa6.64□□□□□ -1.35
RER1YCL001W MAP1Q01662 387 aaKnown RBP RIP-Chip data6.64□□□□□ -1.35not detected
Retrieved 100 of 5,963 RNA–protein pairs in 9.2 ms