RNA–Protein interactions for RNA: YBR275C

RIF1, Transcript of Protein that binds to the Rap1p C-terminus, yeastyeast

Gene RIF1, Length 5,751 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RIF1YBR275C DAK2P43550 591 aa3.12□□□□□ -1.91
RIF1YBR275C TOM22P49334 152 aa3.12□□□□□ -1.91
RIF1YBR275C BUL2Q03758 920 aaKnown RBP3.12□□□□□ -1.91
RIF1YBR275C YDR179W-AQ03983 463 aa3.12□□□□□ -1.91
RIF1YBR275C ECM38Q05902 660 aaPredicted RBP3.12□□□□□ -1.91
RIF1YBR275C SUB2Q07478 446 aaKnown RBP3.12□□□□□ -1.91
RIF1YBR275C ACK1Q07622 623 aaPredicted RBP3.12□□□□□ -1.91
RIF1YBR275C ADY3Q07732 790 aa3.12□□□□□ -1.91
RIF1YBR275C YAH1Q12184 172 aaKnown RBP3.12□□□□□ -1.91
RIF1YBR275C PTC5Q12511 572 aa3.12□□□□□ -1.91
RIF1YBR275C PMS1P14242 873 aa3.12□□□□□ -1.91
RIF1YBR275C HPR1P17629 752 aaKnown RBP3.12□□□□□ -1.91
RIF1YBR275C YCL042WP25572 119 aa3.12□□□□□ -1.91
RIF1YBR275C CRM1P30822 1084 aaKnown RBP3.12□□□□□ -1.91
RIF1YBR275C PTH2P34222 208 aa3.12□□□□□ -1.91
RIF1YBR275C ADD66P36040 267 aa3.12□□□□□ -1.91
RIF1YBR275C CCT2P39076 527 aaKnown RBP3.12□□□□□ -1.91
RIF1YBR275C BUD8P41698 603 aa3.12□□□□□ -1.91
RIF1YBR275C SPO74P45819 413 aa3.12□□□□□ -1.91
RIF1YBR275C VID30P53076 958 aa3.12□□□□□ -1.91
RIF1YBR275C ATG9Q12142 997 aa3.12□□□□□ -1.91
RIF1YBR275C PCA1P38360 1216 aa3.11□□□□□ -1.91
RIF1YBR275C SMC2P38989 1170 aaKnown RBP3.11□□□□□ -1.91
RIF1YBR275C RPA34P47006 233 aaPredicted RBP3.11□□□□□ -1.91
RIF1YBR275C LOH1P47055 219 aa3.11□□□□□ -1.91
RIF1YBR275C VPS25P47142 202 aa3.11□□□□□ -1.91
RIF1YBR275C ZPR1P53303 486 aaKnown RBP3.11□□□□□ -1.91
RIF1YBR275C NEW1Q08972 1196 aaKnown RBP3.11□□□□□ -1.91
RIF1YBR275C RGS2Q99188 309 aa3.11□□□□□ -1.91
RIF1YBR275C SIR3P06701 978 aa3.11□□□□□ -1.91
RIF1YBR275C SUV3P32580 737 aa3.11□□□□□ -1.91
RIF1YBR275C CNS1P33313 385 aa3.11□□□□□ -1.91
RIF1YBR275C CIC1P38779 376 aaKnown RBP3.11□□□□□ -1.91
RIF1YBR275C ACS1Q01574 713 aa3.11□□□□□ -1.91
RIF1YBR275C YPQ2Q06328 317 aa3.11□□□□□ -1.91
RIF1YBR275C DBP10Q12389 995 aaKnown RBP3.11□□□□□ -1.91
RIF1YBR275C HEM1P09950 548 aaPredicted RBP3.11□□□□□ -1.91
RIF1YBR275C NUD1P32336 851 aa3.11□□□□□ -1.91
RIF1YBR275C COY1P34237 679 aa3.11□□□□□ -1.91
RIF1YBR275C NTR2P36118 322 aaPredicted RBP3.11□□□□□ -1.91
RIF1YBR275C INP52P50942 1183 aa3.11□□□□□ -1.91
RIF1YBR275C PCL10P53124 433 aa3.11□□□□□ -1.91
RIF1YBR275C NOP13P53883 403 aaKnown RBP RIP-Chip data3.11□□□□□ -1.91not detected
RIF1YBR275C YPL260WQ08977 551 aa3.11□□□□□ -1.91
RIF1YBR275C NOP58Q12499 511 aaKnown RBP3.11□□□□□ -1.91
RIF1YBR275C PCK1P10963 549 aa3.11□□□□□ -1.91
RIF1YBR275C RPO26P20435 155 aa3.11□□□□□ -1.91
RIF1YBR275C NUP1P20676 1076 aa3.11□□□□□ -1.91
RIF1YBR275C KCC4P25389 1037 aa3.11□□□□□ -1.91
RIF1YBR275C GLN1P32288 370 aaKnown RBP3.11□□□□□ -1.91
RIF1YBR275C ISW1P38144 1129 aa3.11□□□□□ -1.91
RIF1YBR275C IRC6P43615 237 aa3.11□□□□□ -1.91
RIF1YBR275C ALT1P52893 592 aa3.11□□□□□ -1.91
RIF1YBR275C NCS6P53088 359 aa3.11□□□□□ -1.91
RIF1YBR275C BET4Q00618 327 aa3.11□□□□□ -1.91
RIF1YBR275C PEX29Q03370 554 aa3.11□□□□□ -1.91
RIF1YBR275C RKM2Q03942 479 aa3.11□□□□□ -1.91
RIF1YBR275C ENT2Q05785 613 aa3.11□□□□□ -1.91
RIF1YBR275C CSC1Q06538 782 aa3.11□□□□□ -1.91
RIF1YBR275C RPS8AP0CX39 200 aaKnown RBP3.1□□□□□ -1.91
RIF1YBR275C RPS8BP0CX40 200 aaKnown RBP3.1□□□□□ -1.91
RIF1YBR275C PRP6P19735 899 aaPredicted RBP3.1□□□□□ -1.91
RIF1YBR275C ICL1P28240 557 aaPredicted RBP3.1□□□□□ -1.91
RIF1YBR275C MRF1P30775 413 aaPredicted RBP3.1□□□□□ -1.91
RIF1YBR275C SYN8P31377 255 aa3.1□□□□□ -1.91
RIF1YBR275C GCD11P32481 527 aaKnown RBP3.1□□□□□ -1.91
RIF1YBR275C OLA1P38219 394 aaKnown RBP3.1□□□□□ -1.91
RIF1YBR275C IAH1P41734 238 aa3.1□□□□□ -1.91
RIF1YBR275C VPS62P53285 467 aa3.1□□□□□ -1.91
RIF1YBR275C UGO1Q03327 502 aa3.1□□□□□ -1.91
RIF1YBR275C YPR097WQ06839 1073 aa3.1□□□□□ -1.91
RIF1YBR275C COR1P07256 457 aa3.1□□□□□ -1.91
RIF1YBR275C PUT3P25502 979 aaPredicted RBP3.1□□□□□ -1.91
RIF1YBR275C MRPL7P36519 292 aa3.1□□□□□ -1.91
RIF1YBR275C PAM1P37304 830 aaKnown RBP3.1□□□□□ -1.91
RIF1YBR275C AKR1P39010 764 aa3.1□□□□□ -1.91
RIF1YBR275C JHD1P40034 492 aa3.1□□□□□ -1.91
RIF1YBR275C NDC80P40460 691 aa3.1□□□□□ -1.91
RIF1YBR275C LAM5P43560 674 aa3.1□□□□□ -1.91
RIF1YBR275C STU2P46675 888 aa3.1□□□□□ -1.91
RIF1YBR275C TRF5P48561 642 aaKnown RBP3.1□□□□□ -1.91
RIF1YBR275C MAL11P53048 616 aa3.1□□□□□ -1.91
RIF1YBR275C TAM41P53230 385 aa3.1□□□□□ -1.91
RIF1YBR275C VPS16Q03308 798 aa3.1□□□□□ -1.91
RIF1YBR275C YPR078CQ06813 372 aa3.1□□□□□ -1.91
RIF1YBR275C REC8Q12188 680 aa3.1□□□□□ -1.91
RIF1YBR275C DPH6Q12429 685 aa3.1□□□□□ -1.91
RIF1YBR275C EDE1P34216 1381 aa3.1□□□□□ -1.91
RIF1YBR275C DUR3P33413 735 aa3.1□□□□□ -1.91
RIF1YBR275C TEF4P36008 412 aaKnown RBP3.1□□□□□ -1.91
RIF1YBR275C MRPL40P36534 297 aa3.1□□□□□ -1.91
RIF1YBR275C TIF5P38431 405 aaKnown RBP3.1□□□□□ -1.91
RIF1YBR275C TIM54P47045 478 aa3.1□□□□□ -1.91
RIF1YBR275C NUT1P53114 1132 aa3.1□□□□□ -1.91
RIF1YBR275C KRE28Q04431 385 aa3.1□□□□□ -1.91
RIF1YBR275C YML082WQ04533 649 aaKnown RBP3.1□□□□□ -1.91
RIF1YBR275C PYC1P11154 1178 aaKnown RBP3.1□□□□□ -1.91
RIF1YBR275C EMC3P36039 253 aa3.1□□□□□ -1.91
RIF1YBR275C PRS3P38689 320 aaKnown RBP3.1□□□□□ -1.91
RIF1YBR275C YLF2P38746 405 aa3.1□□□□□ -1.91
Retrieved 100 of 5,963 RNA–protein pairs in 35.6 ms