RNA–Protein interactions for RNA: YBL024W

NCL1, Transcript of S-adenosyl-L-methionine-dependent tRNA: m5C-methyltransferase, yeast

Gene NCL1, Length 2,055 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NCL1	YBL024W	PUF4	P25339	888 aa	Known RBP RIP-Chip data	3.08	□□□□□ -1.92	RIP-Chip
NCL1	YBL024W	MRP8	P35719	219 aa		3.08	□□□□□ -1.92
NCL1	YBL024W	GPB2	P39717	880 aa		3.08	□□□□□ -1.92
NCL1	YBL024W	CHZ1	P40019	153 aa	Predicted RBP	3.08	□□□□□ -1.92
NCL1	YBL024W	IRR1	P40541	1150 aa		3.08	□□□□□ -1.92
NCL1	YBL024W	ENV11	P53246	860 aa		3.08	□□□□□ -1.92
NCL1	YBL024W	HOS3	Q02959	697 aa	Known RBP	3.08	□□□□□ -1.92
NCL1	YBL024W	SPO75	Q07798	868 aa		3.08	□□□□□ -1.92
NCL1	YBL024W	RSC58	Q07979	502 aa		3.08	□□□□□ -1.92
NCL1	YBL024W	YOR352W	Q08816	343 aa		3.08	□□□□□ -1.92
NCL1	YBL024W	OSH2	Q12451	1283 aa		3.08	□□□□□ -1.92
NCL1	YBL024W	SPS1	P08458	490 aa		3.08	□□□□□ -1.92
NCL1	YBL024W	PHO8	P11491	566 aa		3.08	□□□□□ -1.92
NCL1	YBL024W	DBP5	P20449	482 aa	Known RBP	3.08	□□□□□ -1.92
NCL1	YBL024W	RGD1	P38339	666 aa		3.08	□□□□□ -1.92
NCL1	YBL024W	FPR3	P38911	411 aa	Known RBP	3.08	□□□□□ -1.92
NCL1	YBL024W	MBP1	P39678	833 aa		3.08	□□□□□ -1.92
NCL1	YBL024W	UBP5	P39944	805 aa		3.08	□□□□□ -1.92
NCL1	YBL024W	YGL176C	P46945	554 aa		3.08	□□□□□ -1.92
NCL1	YBL024W	CIT1	P00890	479 aa		3.07	□□□□□ -1.92
NCL1	YBL024W	CAN1	P04817	590 aa		3.07	□□□□□ -1.92
NCL1	YBL024W	HSP60	P19882	572 aa	Known RBP	3.07	□□□□□ -1.92
NCL1	YBL024W	PBY1	P38254	753 aa		3.07	□□□□□ -1.92
NCL1	YBL024W	ETP1	P38748	585 aa	Known RBP	3.07	□□□□□ -1.92
NCL1	YBL024W	RPN3	P40016	523 aa	Known RBP	3.07	□□□□□ -1.92
NCL1	YBL024W	MPH1	P40562	993 aa		3.07	□□□□□ -1.92
NCL1	YBL024W	KRI1	P42846	591 aa	Known RBP	3.07	□□□□□ -1.92
NCL1	YBL024W	CNN1	P43618	361 aa		3.07	□□□□□ -1.92
NCL1	YBL024W	EAF1	Q06337	982 aa		3.07	□□□□□ -1.92
NCL1	YBL024W	RKM4	Q12504	494 aa		3.07	□□□□□ -1.92
NCL1	YBL024W	YKL107W	P34251	309 aa		3.07	□□□□□ -1.92
NCL1	YBL024W	MCM7	P38132	845 aa		3.07	□□□□□ -1.92
NCL1	YBL024W	PIK1	P39104	1066 aa		3.07	□□□□□ -1.92
NCL1	YBL024W	MNN1	P39106	762 aa		3.07	□□□□□ -1.92
NCL1	YBL024W	ERP6	P53198	216 aa		3.07	□□□□□ -1.92
NCL1	YBL024W	SNO2	P53823	222 aa		3.07	□□□□□ -1.92
NCL1	YBL024W	UBX5	Q06682	500 aa		3.07	□□□□□ -1.92
NCL1	YBL024W	GAL11	P19659	1081 aa		3.06	□□□□□ -1.92
NCL1	YBL024W	ARE1	P25628	610 aa		3.06	□□□□□ -1.92
NCL1	YBL024W	PIN4	P34217	668 aa	Known RBP RIP-Chip data	3.06	□□□□□ -1.92	not detected
NCL1	YBL024W	HNT2	P49775	206 aa		3.06	□□□□□ -1.92
NCL1	YBL024W	RTA1	P53047	317 aa		3.06	□□□□□ -1.92
NCL1	YBL024W	UTP8	P53276	713 aa	Known RBP	3.06	□□□□□ -1.92
NCL1	YBL024W	MRPL22	P53881	309 aa		3.06	□□□□□ -1.92
NCL1	YBL024W	TAF8	Q03750	510 aa		3.06	□□□□□ -1.92
NCL1	YBL024W	POB3	Q04636	552 aa	Known RBP	3.06	□□□□□ -1.92
NCL1	YBL024W	CDA2	Q06703	312 aa		3.06	□□□□□ -1.92
NCL1	YBL024W	YLR125W	Q12138	136 aa		3.06	□□□□□ -1.92
NCL1	YBL024W	MLS1	P30952	554 aa		3.05	□□□□□ -1.92
NCL1	YBL024W	THI4	P32318	326 aa		3.05	□□□□□ -1.92
NCL1	YBL024W	GGA2	P38817	585 aa	Known RBP	3.05	□□□□□ -1.92
NCL1	YBL024W	SIP5	P40210	489 aa	Known RBP	3.05	□□□□□ -1.92
NCL1	YBL024W	ALR2	P43553	858 aa		3.05	□□□□□ -1.92
NCL1	YBL024W	YJR142W	P47173	342 aa		3.05	□□□□□ -1.92
NCL1	YBL024W	BET3	P36149	193 aa		3.05	□□□□□ -1.92
NCL1	YBL024W	YDL177C	Q12257	170 aa		3.05	□□□□□ -1.92
NCL1	YBL024W	HBS1	P32769	611 aa	Known RBP	3.04	□□□□□ -1.92
NCL1	YBL024W	BAP2	P38084	609 aa		3.04	□□□□□ -1.92
NCL1	YBL024W	AIM3	P38266	947 aa	Known RBP	3.04	□□□□□ -1.92
NCL1	YBL024W	HUL4	P40985	892 aa		3.04	□□□□□ -1.92
NCL1	YBL024W	SEC26	P41810	973 aa	Known RBP	3.04	□□□□□ -1.92
NCL1	YBL024W	RIM8	P53179	542 aa		3.04	□□□□□ -1.92
NCL1	YBL024W	SNF5	P18480	905 aa		3.04	□□□□□ -1.92
NCL1	YBL024W	PRP9	P19736	530 aa	Known RBP	3.04	□□□□□ -1.92
NCL1	YBL024W	TSR4	P25040	408 aa		3.04	□□□□□ -1.92
NCL1	YBL024W	TSA1	P34760	196 aa	Known RBP	3.04	□□□□□ -1.92
NCL1	YBL024W	RCL1	Q08096	367 aa	Predicted RBP	3.04	□□□□□ -1.92
NCL1	YBL024W	YGR161W-C	Q3E744	92 aa		3.04	□□□□□ -1.92
NCL1	YBL024W	YER152C	P10356	443 aa		3.03	□□□□□ -1.92
NCL1	YBL024W	DNM1	P54861	757 aa		3.03	□□□□□ -1.92
NCL1	YBL024W	NPL3	Q01560	414 aa	Known RBP RIP-Chip data	3.03	□□□□□ -1.92	not detected
NCL1	YBL024W	RSM24	Q03976	319 aa		3.03	□□□□□ -1.92
NCL1	YBL024W	GNT1	Q12096	491 aa		3.03	□□□□□ -1.92
NCL1	YBL024W	HBN1	Q96VH4	193 aa		3.03	□□□□□ -1.92
NCL1	YBL024W	TOP3	P13099	656 aa		3.02	□□□□□ -1.93
NCL1	YBL024W	PRP6	P19735	899 aa	Predicted RBP	3.02	□□□□□ -1.93
NCL1	YBL024W	DBP2	P24783	546 aa	Known RBP	3.02	□□□□□ -1.93
NCL1	YBL024W	MSH2	P25847	964 aa		3.02	□□□□□ -1.93
NCL1	YBL024W	YKL222C	P35995	705 aa		3.02	□□□□□ -1.93
NCL1	YBL024W	CCC2	P38995	1004 aa		3.02	□□□□□ -1.93
NCL1	YBL024W	MAL11	P53048	616 aa		3.02	□□□□□ -1.93
NCL1	YBL024W	KIN2	P13186	1147 aa	Known RBP	3.02	□□□□□ -1.93
NCL1	YBL024W	GRX4	P32642	244 aa		3.02	□□□□□ -1.93
NCL1	YBL024W	YBR284W	P38150	797 aa		3.02	□□□□□ -1.93
NCL1	YBL024W	RFC5	P38251	354 aa		3.02	□□□□□ -1.93
NCL1	YBL024W	SNF7	P39929	240 aa	Known RBP	3.02	□□□□□ -1.93
NCL1	YBL024W	UTP14	Q04500	899 aa	Known RBP	3.02	□□□□□ -1.93
NCL1	YBL024W	SGD1	Q06132	899 aa		3.02	□□□□□ -1.93
NCL1	YBL024W	SPP382	Q06411	708 aa	Predicted RBP	3.02	□□□□□ -1.93
NCL1	YBL024W	YDL124W	Q07551	312 aa	Known RBP	3.02	□□□□□ -1.93
NCL1	YBL024W	NTG2	Q08214	380 aa		3.02	□□□□□ -1.93
NCL1	YBL024W	NOP14	Q99207	810 aa	Known RBP	3.02	□□□□□ -1.93
NCL1	YBL024W	SOD2	P00447	233 aa		3.01	□□□□□ -1.93
NCL1	YBL024W	THS1	P04801	734 aa	Known RBP	3.01	□□□□□ -1.93
NCL1	YBL024W	RPS13	P05756	151 aa	Known RBP	3.01	□□□□□ -1.93
NCL1	YBL024W	RPL11A	P0C0W9	174 aa	Known RBP	3.01	□□□□□ -1.93
NCL1	YBL024W	PNT1	P38969	423 aa		3.01	□□□□□ -1.93
NCL1	YBL024W	GUS1	P46655	708 aa	Known RBP RIP-Chip data	3.01	□□□□□ -1.93	not detected
NCL1	YBL024W	HSV2	P50079	448 aa	Predicted RBP	3.01	□□□□□ -1.93
NCL1	YBL024W	YDR306C	Q06640	478 aa		3.01	□□□□□ -1.93

Retrieved 100 of 5,963 RNA–protein pairs in 86.1 ms