RNA–Protein interactions for RNA: ENST00000626274.2

PNKP-219, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 2

Gene PNKP, Length 752 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-219ENST00000626274 ARHGEF1Q92888 912 aaKnown RBP26.25■■□□□ 1.79
PNKP-219ENST00000626274 TRIM35Q9UPQ4 493 aa26.25■■□□□ 1.79
PNKP-219ENST00000626274 SRCAPQ6ZRS2 3230 aa26.25■■□□□ 1.79
PNKP-219ENST00000626274 C4AP0C0L4 1744 aa26.24■■□□□ 1.79
PNKP-219ENST00000626274 SNRPA1P09661 255 aaKnown RBP26.23■■□□□ 1.79
PNKP-219ENST00000626274 MSL1Q68DK7 614 aa26.23■■□□□ 1.79
PNKP-219ENST00000626274 ARXQ96QS3 562 aa26.23■■□□□ 1.79
PNKP-219ENST00000626274 RFC4P35249 363 aa26.22■■□□□ 1.79
PNKP-219ENST00000626274 ZBTB1Q9Y2K1 713 aa26.22■■□□□ 1.79
PNKP-219ENST00000626274 SOS1Q07889 1333 aaPredicted RBP26.21■■□□□ 1.79
PNKP-219ENST00000626274 BABAM1Q9NWV8 329 aa26.21■■□□□ 1.79
PNKP-219ENST00000626274 TSPYL4Q9UJ04 414 aa26.2■■□□□ 1.78
PNKP-219ENST00000626274 CANXP27824 592 aaKnown RBP26.19■■□□□ 1.78
PNKP-219ENST00000626274 USP16Q9Y5T5 823 aa26.19■■□□□ 1.78
PNKP-219ENST00000626274 EIF4A1P60842 406 aaKnown RBP26.18■■□□□ 1.78
PNKP-219ENST00000626274 PRAMEF22A3QJZ6 481 aa26.17■■□□□ 1.78
PNKP-219ENST00000626274 LAMB4A4D0S4 1761 aa26.16■■□□□ 1.78
PNKP-219ENST00000626274 A1BGP04217 495 aa26.16■■□□□ 1.78
PNKP-219ENST00000626274 NLGN1Q8N2Q7 840 aa26.16■■□□□ 1.78
PNKP-219ENST00000626274 COL15A1P39059 1388 aa26.16■■□□□ 1.78
PNKP-219ENST00000626274 GYS1P13807 737 aa26.15■■□□□ 1.78
PNKP-219ENST00000626274 EIF5P55010 431 aaKnown RBP26.15■■□□□ 1.78
PNKP-219ENST00000626274 USP42Q9H9J4 1324 aaKnown RBP26.14■■□□□ 1.78
PNKP-219ENST00000626274 CHL1O00533 1208 aa26.14■■□□□ 1.78
PNKP-219ENST00000626274 GIGYF1O75420 1035 aaPredicted RBP26.14■■□□□ 1.78
PNKP-219ENST00000626274 FAM9BQ8IZU0 186 aa26.14■■□□□ 1.78
PNKP-219ENST00000626274 FHDC1Q9C0D6 1143 aaPredicted RBP26.14■■□□□ 1.78
PNKP-219ENST00000626274 LAS1LQ9Y4W2 734 aaKnown RBP26.14■■□□□ 1.78
PNKP-219ENST00000626274 ZPR1O75312 459 aa26.13■■□□□ 1.77
PNKP-219ENST00000626274 IL6STP40189 918 aaPredicted RBP26.13■■□□□ 1.77
PNKP-219ENST00000626274 CALD1Q05682 793 aaKnown RBP26.13■■□□□ 1.77
PNKP-219ENST00000626274 SRP68Q9UHB9 627 aaKnown RBP26.13■■□□□ 1.77
PNKP-219ENST00000626274 A0A087WZG4 1122 aa26.12■■□□□ 1.77
PNKP-219ENST00000626274 NARFQ9UHQ1 456 aa26.12■■□□□ 1.77
PNKP-219ENST00000626274 NPM2Q86SE8 214 aaKnown RBP26.11■■□□□ 1.77
PNKP-219ENST00000626274 CFAP44Q96MT7 982 aa26.11■■□□□ 1.77
PNKP-219ENST00000626274 SYT17Q9BSW7 474 aa26.11■■□□□ 1.77
PNKP-219ENST00000626274 ZNF330Q9Y3S2 320 aaPredicted RBP26.11■■□□□ 1.77
PNKP-219ENST00000626274 MMP10P09238 476 aa26.09■■□□□ 1.77
PNKP-219ENST00000626274 CCDC27Q2M243 656 aa26.09■■□□□ 1.77
PNKP-219ENST00000626274 NCBP3Q53F19 620 aaKnown RBP26.09■■□□□ 1.77
PNKP-219ENST00000626274 USPL1Q5W0Q7 1092 aa26.09■■□□□ 1.77
PNKP-219ENST00000626274 KLHL34Q8N239 644 aa26.09■■□□□ 1.77
PNKP-219ENST00000626274 DIEXFQ68CQ4 756 aaKnown RBP26.08■■□□□ 1.77
PNKP-219ENST00000626274 SENP3-EIF4A1A0A087X0R7 540 aa26.07■■□□□ 1.76
PNKP-219ENST00000626274 CCER2I3L3R5 266 aa26.07■■□□□ 1.76
PNKP-219ENST00000626274 PIP4K2AP48426 406 aaPredicted RBP26.07■■□□□ 1.76
PNKP-219ENST00000626274 FKBP8Q14318 412 aa26.07■■□□□ 1.76
PNKP-219ENST00000626274 IFT57Q9NWB7 429 aa26.07■■□□□ 1.76
PNKP-219ENST00000626274 NBPF26B4DH59 902 aa26.06■■□□□ 1.76
PNKP-219ENST00000626274 ZNF853P0CG23 659 aa26.06■■□□□ 1.76
PNKP-219ENST00000626274 GNAI1P63096 354 aa26.06■■□□□ 1.76
PNKP-219ENST00000626274 NBPF10Q6P3W6 841 aaKnown RBP26.06■■□□□ 1.76
PNKP-219ENST00000626274 NBPF15Q8N660 670 aa26.06■■□□□ 1.76
PNKP-219ENST00000626274 WWC1Q8IX03 1113 aa26.05■■□□□ 1.76
PNKP-219ENST00000626274 TBC1D2BQ9UPU7 963 aa26.05■■□□□ 1.76
PNKP-219ENST00000626274 MBIPQ9NS73 344 aa26.04■■□□□ 1.76
PNKP-219ENST00000626274 PARP3Q9Y6F1 533 aa26.04■■□□□ 1.76
PNKP-219ENST00000626274 SCN7AQ01118 1682 aa26.03■■□□□ 1.76
PNKP-219ENST00000626274 DZIP3Q86Y13 1208 aaKnown RBP26.03■■□□□ 1.76
PNKP-219ENST00000626274 BCL2L12Q9HB09 334 aa26.03■■□□□ 1.76
PNKP-219ENST00000626274 CD2APQ9Y5K6 639 aa26.03■■□□□ 1.76
PNKP-219ENST00000626274 ERBB4Q15303 1308 aa26.02■■□□□ 1.76
PNKP-219ENST00000626274 TM4SF1P30408 202 aa26.01■■□□□ 1.75
PNKP-219ENST00000626274 KRT24Q2M2I5 525 aa26.01■■□□□ 1.75
PNKP-219ENST00000626274 BCORQ6W2J9 1755 aa26.01■■□□□ 1.75
PNKP-219ENST00000626274 EIF2S2P20042 333 aaKnown RBP26■■□□□ 1.75
PNKP-219ENST00000626274 NGEFQ8N5V2 710 aa26■■□□□ 1.75
PNKP-219ENST00000626274 SALL2Q9Y467 1007 aaPredicted RBP26■■□□□ 1.75
PNKP-219ENST00000626274 CAMTA2O94983 1202 aa25.99■■□□□ 1.75
PNKP-219ENST00000626274 DDR1Q08345 913 aa25.99■■□□□ 1.75
PNKP-219ENST00000626274 KIF13BQ9NQT8 1826 aa25.98■■□□□ 1.75
PNKP-219ENST00000626274 NFIXQ14938 502 aa25.98■■□□□ 1.75
PNKP-219ENST00000626274 NLGN2Q8NFZ4 835 aa25.98■■□□□ 1.75
PNKP-219ENST00000626274 IL16Q14005 1332 aa25.97■■□□□ 1.75
PNKP-219ENST00000626274 DCAF8L1A6NGE4 600 aa25.97■■□□□ 1.75
PNKP-219ENST00000626274 HOXB7P09629 217 aa25.97■■□□□ 1.75
PNKP-219ENST00000626274 MYL6BP14649 208 aa25.97■■□□□ 1.75
PNKP-219ENST00000626274 AFDNP55196 1824 aaKnown RBP25.96■■□□□ 1.75
PNKP-219ENST00000626274 POLRMTO00411 1230 aaKnown RBP25.96■■□□□ 1.75
PNKP-219ENST00000626274 DUSP27Q5VZP5 1158 aa25.95■■□□□ 1.74
PNKP-219ENST00000626274 WDR63Q8IWG1 891 aa25.95■■□□□ 1.74
PNKP-219ENST00000626274 RGL2O15211 777 aa25.94■■□□□ 1.74
PNKP-219ENST00000626274 PDIA6Q15084 440 aa25.94■■□□□ 1.74
PNKP-219ENST00000626274 TBC1D9BQ66K14 1250 aa25.94■■□□□ 1.74
PNKP-219ENST00000626274 CLEC4GQ6UXB4 293 aa25.94■■□□□ 1.74
PNKP-219ENST00000626274 BICDL1Q6ZP65 573 aa25.94■■□□□ 1.74
PNKP-219ENST00000626274 MIER1Q8N108 512 aa25.94■■□□□ 1.74
PNKP-219ENST00000626274 NECTIN2Q92692 538 aa25.94■■□□□ 1.74
PNKP-219ENST00000626274 ZNF652Q9Y2D9 606 aa25.94■■□□□ 1.74
PNKP-219ENST00000626274 C10orf71Q711Q0 1435 aa25.94■■□□□ 1.74
PNKP-219ENST00000626274 NRXN2Q9P2S2 1712 aa25.92■■□□□ 1.74
PNKP-219ENST00000626274 HDGFL1Q5TGJ6 251 aa25.92■■□□□ 1.74
PNKP-219ENST00000626274 NUP98P52948 1817 aa25.91■■□□□ 1.74
PNKP-219ENST00000626274 SERPINB2P05120 415 aa25.91■■□□□ 1.74
PNKP-219ENST00000626274 KIF6Q6ZMV9 814 aa25.91■■□□□ 1.74
PNKP-219ENST00000626274 TSR2Q969E8 191 aaKnown RBP25.91■■□□□ 1.74
PNKP-219ENST00000626274 DDX21Q9NR30 783 aaKnown RBP eCLIP25.91■■□□□ 1.74
PNKP-219ENST00000626274 PROSER3Q2NL68 480 aa25.9■■□□□ 1.74
PNKP-219ENST00000626274 TTLL7Q6ZT98 887 aa25.9■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms