RNA–Protein interactions for RNA: ENST00000624700.3

CDKL5-207, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 4

Gene CDKL5, Length 564 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-207ENST00000624700 CFHR5Q9BXR6 569 aa7.85□□□□□ -1.15
CDKL5-207ENST00000624700 OIP5O43482 229 aa7.84□□□□□ -1.15
CDKL5-207ENST00000624700 GTF2E1P29083 439 aaPredicted RBP7.84□□□□□ -1.15
CDKL5-207ENST00000624700 MAP2K3P46734 347 aa7.84□□□□□ -1.15
CDKL5-207ENST00000624700 ZSCAN10Q96SZ4 725 aaPredicted RBP7.84□□□□□ -1.15
CDKL5-207ENST00000624700 GPAMQ9HCL2 828 aa7.84□□□□□ -1.15
CDKL5-207ENST00000624700 DNAAF2Q9NVR5 837 aaKnown RBP7.84□□□□□ -1.15
CDKL5-207ENST00000624700 USTQ9Y2C2 406 aa7.84□□□□□ -1.15
CDKL5-207ENST00000624700 HRH3Q9Y5N1 445 aa7.84□□□□□ -1.15
CDKL5-207ENST00000624700 A0A1B0GTH6 734 aa7.83□□□□□ -1.16
CDKL5-207ENST00000624700 PHKA2P46019 1235 aa7.83□□□□□ -1.16
CDKL5-207ENST00000624700 GTF2IP78347 998 aa7.83□□□□□ -1.16
CDKL5-207ENST00000624700 PLA2G4EQ3MJ16 856 aa7.83□□□□□ -1.16
CDKL5-207ENST00000624700 GNASQ5JWF2 1037 aa7.83□□□□□ -1.16
CDKL5-207ENST00000624700 OGFOD1Q8N543 542 aa7.83□□□□□ -1.16
CDKL5-207ENST00000624700 FAM200AQ8TCP9 573 aa7.83□□□□□ -1.16
CDKL5-207ENST00000624700 OXCT2Q9BYC2 517 aaPredicted RBP7.83□□□□□ -1.16
CDKL5-207ENST00000624700 PHF24Q9UPV7 400 aa7.83□□□□□ -1.16
CDKL5-207ENST00000624700 MSTNO14793 375 aa7.82□□□□□ -1.16
CDKL5-207ENST00000624700 THBS1P07996 1170 aa7.82□□□□□ -1.16
CDKL5-207ENST00000624700 PDIA4P13667 645 aaKnown RBP7.82□□□□□ -1.16
CDKL5-207ENST00000624700 CDCA8Q53HL2 280 aa7.82□□□□□ -1.16
CDKL5-207ENST00000624700 ESCO1Q5FWF5 840 aa7.82□□□□□ -1.16
CDKL5-207ENST00000624700 TMEM214Q6NUQ4 689 aaKnown RBP7.82□□□□□ -1.16
CDKL5-207ENST00000624700 FHDC1Q9C0D6 1143 aaPredicted RBP7.82□□□□□ -1.16
CDKL5-207ENST00000624700 PCDHGA11Q9Y5H2 935 aa7.82□□□□□ -1.16
CDKL5-207ENST00000624700 PTK7Q13308 1070 aa7.81□□□□□ -1.16
CDKL5-207ENST00000624700 LBRQ14739 615 aaKnown RBP7.81□□□□□ -1.16
CDKL5-207ENST00000624700 ANKMY2Q8IV38 441 aa7.81□□□□□ -1.16
CDKL5-207ENST00000624700 USP17L15C9J2P7 530 aa7.8□□□□□ -1.16
CDKL5-207ENST00000624700 USP17L10C9JJH3 530 aa7.8□□□□□ -1.16
CDKL5-207ENST00000624700 USP17L13C9JLJ4 530 aa7.8□□□□□ -1.16
CDKL5-207ENST00000624700 USP17L12C9JPN9 530 aa7.8□□□□□ -1.16
CDKL5-207ENST00000624700 USP17L11C9JVI0 530 aa7.8□□□□□ -1.16
CDKL5-207ENST00000624700 USP17L21D6R901 530 aa7.8□□□□□ -1.16
CDKL5-207ENST00000624700 USP17L18D6R9N7 530 aa7.8□□□□□ -1.16
CDKL5-207ENST00000624700 USP17L22D6RA61 530 aa7.8□□□□□ -1.16
CDKL5-207ENST00000624700 USP17L17D6RBQ6 530 aa7.8□□□□□ -1.16
CDKL5-207ENST00000624700 USP17L19D6RCP7 530 aa7.8□□□□□ -1.16
CDKL5-207ENST00000624700 USP17L20D6RJB6 530 aa7.8□□□□□ -1.16
CDKL5-207ENST00000624700 BACH1O14867 736 aa7.8□□□□□ -1.16
CDKL5-207ENST00000624700 ZBTB7BO15156 539 aaPredicted RBP7.8□□□□□ -1.16
CDKL5-207ENST00000624700 PSME1Q06323 249 aa7.8□□□□□ -1.16
CDKL5-207ENST00000624700 USP17L24Q0WX57 530 aa7.8□□□□□ -1.16
CDKL5-207ENST00000624700 C4orf17Q53FE4 359 aa7.8□□□□□ -1.16
CDKL5-207ENST00000624700 SIX5Q8N196 739 aa7.8□□□□□ -1.16
CDKL5-207ENST00000624700 PGBD3Q8N328 593 aa7.8□□□□□ -1.16
CDKL5-207ENST00000624700 KLRG1Q96E93 195 aa7.8□□□□□ -1.16
CDKL5-207ENST00000624700 NOVA2Q9UNW9 492 aaKnown RBP7.8□□□□□ -1.16
CDKL5-207ENST00000624700 M0R2N6 131 aa7.79□□□□□ -1.16
CDKL5-207ENST00000624700 MSX1P28360 303 aa7.79□□□□□ -1.16
CDKL5-207ENST00000624700 SEC13P55735 322 aa7.79□□□□□ -1.16
CDKL5-207ENST00000624700 CCDC102BQ68D86 513 aa7.79□□□□□ -1.16
CDKL5-207ENST00000624700 SPOCK3Q9BQ16 436 aa7.79□□□□□ -1.16
CDKL5-207ENST00000624700 ITGB2P05107 769 aa7.78□□□□□ -1.16
CDKL5-207ENST00000624700 CLDN10P78369 228 aa7.78□□□□□ -1.16
CDKL5-207ENST00000624700 UBAP2LQ14157 1087 aaKnown RBP7.78□□□□□ -1.16
CDKL5-207ENST00000624700 CRTC2Q53ET0 693 aaPredicted RBP7.78□□□□□ -1.16
CDKL5-207ENST00000624700 EFHC2Q5JST6 749 aa7.78□□□□□ -1.16
CDKL5-207ENST00000624700 GALNT6Q8NCL4 622 aa7.78□□□□□ -1.16
CDKL5-207ENST00000624700 TRAIPQ9BWF2 469 aa7.78□□□□□ -1.16
CDKL5-207ENST00000624700 RUBCNLQ9H714 662 aa7.78□□□□□ -1.16
CDKL5-207ENST00000624700 GDF2Q9UK05 429 aaPredicted RBP7.78□□□□□ -1.16
CDKL5-207ENST00000624700 SNRPNP63162 240 aaKnown RBP7.77□□□□□ -1.17
CDKL5-207ENST00000624700 DPYDQ12882 1025 aa7.77□□□□□ -1.17
CDKL5-207ENST00000624700 SWI5Q1ZZU3 235 aa7.77□□□□□ -1.17
CDKL5-207ENST00000624700 B4GALNT3Q6L9W6 998 aa7.77□□□□□ -1.17
CDKL5-207ENST00000624700 PPARGC1BQ86YN6 1023 aaKnown RBP7.77□□□□□ -1.17
CDKL5-207ENST00000624700 RETREG2Q8NC44 543 aa7.77□□□□□ -1.17
CDKL5-207ENST00000624700 ATXN7L1Q9ULK2 861 aaPredicted RBP7.77□□□□□ -1.17
CDKL5-207ENST00000624700 SHISA8B8ZZ34 492 aa7.76□□□□□ -1.17
CDKL5-207ENST00000624700 PATL2C9JE40 543 aaKnown RBP7.76□□□□□ -1.17
CDKL5-207ENST00000624700 GOLGA6L1Q8N7Z2 621 aa7.76□□□□□ -1.17
CDKL5-207ENST00000624700 TPCN2Q8NHX9 752 aa7.76□□□□□ -1.17
CDKL5-207ENST00000624700 RHBDD1Q8TEB9 315 aa7.76□□□□□ -1.17
CDKL5-207ENST00000624700 ZNF594Q96JF6 807 aaPredicted RBP7.76□□□□□ -1.17
CDKL5-207ENST00000624700 ETNK1Q9HBU6 452 aa7.76□□□□□ -1.17
CDKL5-207ENST00000624700 MKL2Q9ULH7 1088 aa7.76□□□□□ -1.17
CDKL5-207ENST00000624700 BMP4P12644 408 aa7.75□□□□□ -1.17
CDKL5-207ENST00000624700 TLR1Q15399 786 aa7.75□□□□□ -1.17
CDKL5-207ENST00000624700 C1orf229Q6ZS94 237 aaPredicted RBP7.75□□□□□ -1.17
CDKL5-207ENST00000624700 EDARADDQ8WWZ3 215 aa7.75□□□□□ -1.17
CDKL5-207ENST00000624700 ADAM23O75077 832 aa7.74□□□□□ -1.17
CDKL5-207ENST00000624700 PROCP04070 461 aa7.74□□□□□ -1.17
CDKL5-207ENST00000624700 INHAP05111 366 aa7.74□□□□□ -1.17
CDKL5-207ENST00000624700 ALYREFQ86V81 257 aaKnown RBP7.74□□□□□ -1.17
CDKL5-207ENST00000624700 ABHD17AQ96GS6 310 aa7.74□□□□□ -1.17
CDKL5-207ENST00000624700 SLC4A9Q96Q91 983 aa7.74□□□□□ -1.17
CDKL5-207ENST00000624700 CRISPLD1Q9H336 500 aa7.74□□□□□ -1.17
CDKL5-207ENST00000624700 RRAGCQ9HB90 399 aa7.74□□□□□ -1.17
CDKL5-207ENST00000624700 NDFIP2Q9NV92 336 aa7.74□□□□□ -1.17
CDKL5-207ENST00000624700 C2CD2LO14523 706 aa7.73□□□□□ -1.17
CDKL5-207ENST00000624700 DKK1O94907 266 aa7.73□□□□□ -1.17
CDKL5-207ENST00000624700 STAU1O95793 577 aaKnown RBP7.73□□□□□ -1.17
CDKL5-207ENST00000624700 FGFR3P22607 806 aa7.73□□□□□ -1.17
CDKL5-207ENST00000624700 GDF10P55107 478 aa7.73□□□□□ -1.17
CDKL5-207ENST00000624700 GAS2L2Q8NHY3 880 aa7.73□□□□□ -1.17
CDKL5-207ENST00000624700 BNIP3LO60238 219 aa7.72□□□□□ -1.17
CDKL5-207ENST00000624700 CTBSQ01459 385 aa7.72□□□□□ -1.17
CDKL5-207ENST00000624700 TMEM164Q5U3C3 297 aa7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms