RNA–Protein interactions for RNA: ENST00000616640.1

RPP38-207, Transcript of ribonuclease P/MRP subunit p38, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RPP38, Length 1,537 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPP38-207ENST00000616640 GOLGA2Q08379 1002 aa29.5■■■□□ 2.31
RPP38-207ENST00000616640 GNPATO15228 680 aa29.49■■■□□ 2.31
RPP38-207ENST00000616640 RC3H1Q5TC82 1133 aaKnown RBP29.49■■■□□ 2.31
RPP38-207ENST00000616640 MYH16Q9H6N6 1097 aa29.48■■■□□ 2.31
RPP38-207ENST00000616640 USP16Q9Y5T5 823 aa29.48■■■□□ 2.31
RPP38-207ENST00000616640 PSDA5PKW4 1024 aaPredicted RBP29.47■■■□□ 2.31
RPP38-207ENST00000616640 CCDC87Q9NVE4 849 aa29.47■■■□□ 2.31
RPP38-207ENST00000616640 FANCIQ9NVI1 1328 aa29.47■■■□□ 2.31
RPP38-207ENST00000616640 KRT24Q2M2I5 525 aa29.46■■■□□ 2.31
RPP38-207ENST00000616640 SPINK5Q9NQ38 1064 aaPredicted RBP29.46■■■□□ 2.31
RPP38-207ENST00000616640 RTCBQ9Y3I0 505 aaKnown RBP29.45■■■□□ 2.31
RPP38-207ENST00000616640 INTS5Q6P9B9 1019 aaKnown RBP29.44■■■□□ 2.3
RPP38-207ENST00000616640 C4AP0C0L4 1744 aa29.43■■■□□ 2.3
RPP38-207ENST00000616640 E9PSI1 815 aa29.43■■■□□ 2.3
RPP38-207ENST00000616640 PHF14O94880 888 aa29.43■■■□□ 2.3
RPP38-207ENST00000616640 ZBTB1Q9Y2K1 713 aa29.43■■■□□ 2.3
RPP38-207ENST00000616640 CASZ1Q86V15 1759 aa29.43■■■□□ 2.3
RPP38-207ENST00000616640 DUSP27Q5VZP5 1158 aa29.42■■■□□ 2.3
RPP38-207ENST00000616640 PNPLA7Q6ZV29 1317 aa29.41■■■□□ 2.3
RPP38-207ENST00000616640 RPS6KA4O75676 772 aa29.41■■■□□ 2.3
RPP38-207ENST00000616640 A1BGP04217 495 aa29.41■■■□□ 2.3
RPP38-207ENST00000616640 EIF2S2P20042 333 aaKnown RBP29.41■■■□□ 2.3
RPP38-207ENST00000616640 CANXP27824 592 aaKnown RBP29.41■■■□□ 2.3
RPP38-207ENST00000616640 SSFA2P28290 1259 aa29.41■■■□□ 2.3
RPP38-207ENST00000616640 FLAD1Q8NFF5 587 aa29.41■■■□□ 2.3
RPP38-207ENST00000616640 ELL2O00472 640 aaPredicted RBP29.4■■■□□ 2.3
RPP38-207ENST00000616640 HOXB7P09629 217 aa29.4■■■□□ 2.3
RPP38-207ENST00000616640 ZBED9Q6R2W3 1325 aa29.4■■■□□ 2.3
RPP38-207ENST00000616640 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP29.4■■■□□ 2.3
RPP38-207ENST00000616640 MSH5O43196 834 aa29.4■■■□□ 2.3
RPP38-207ENST00000616640 C8orf58Q8NAV2 365 aa29.4■■■□□ 2.3
RPP38-207ENST00000616640 AMIGO3Q86WK7 504 aa29.39■■■□□ 2.3
RPP38-207ENST00000616640 CDCA7LQ96GN5 454 aa29.39■■■□□ 2.3
RPP38-207ENST00000616640 SLFN5Q08AF3 891 aa29.38■■■□□ 2.29
RPP38-207ENST00000616640 SMIM5Q71RC9 77 aa29.38■■■□□ 2.29
RPP38-207ENST00000616640 NPM2Q86SE8 214 aaKnown RBP29.38■■■□□ 2.29
RPP38-207ENST00000616640 ZNF330Q9Y3S2 320 aaPredicted RBP29.38■■■□□ 2.29
RPP38-207ENST00000616640 SOS1Q07889 1333 aaPredicted RBP29.37■■■□□ 2.29
RPP38-207ENST00000616640 ADRA2BP18089 450 aa29.37■■■□□ 2.29
RPP38-207ENST00000616640 PIP4K2AP48426 406 aaPredicted RBP29.37■■■□□ 2.29
RPP38-207ENST00000616640 TRAPPC3LQ5T215 181 aa29.37■■■□□ 2.29
RPP38-207ENST00000616640 NECTIN2Q92692 538 aa29.37■■■□□ 2.29
RPP38-207ENST00000616640 EXOSC9Q06265 439 aaKnown RBP29.36■■■□□ 2.29
RPP38-207ENST00000616640 HDGFL1Q5TGJ6 251 aa29.36■■■□□ 2.29
RPP38-207ENST00000616640 COL23A1Q86Y22 540 aaPredicted RBP29.36■■■□□ 2.29
RPP38-207ENST00000616640 COL15A1P39059 1388 aa29.36■■■□□ 2.29
RPP38-207ENST00000616640 CACNA1FO60840 1977 aa29.36■■■□□ 2.29
RPP38-207ENST00000616640 IL6STP40189 918 aaPredicted RBP29.35■■■□□ 2.29
RPP38-207ENST00000616640 TWISTNBQ3B726 338 aaPredicted RBP29.35■■■□□ 2.29
RPP38-207ENST00000616640 TSPYL6Q8N831 410 aa29.35■■■□□ 2.29
RPP38-207ENST00000616640 PDGFDQ9GZP0 370 aaPredicted RBP29.35■■■□□ 2.29
RPP38-207ENST00000616640 ERBB4Q15303 1308 aa29.34■■■□□ 2.29
RPP38-207ENST00000616640 CHMP4AQ9BY43 222 aa29.34■■■□□ 2.29
RPP38-207ENST00000616640 RFC4P35249 363 aa29.33■■■□□ 2.29
RPP38-207ENST00000616640 EIF5P55010 431 aaKnown RBP29.33■■■□□ 2.29
RPP38-207ENST00000616640 ARHGEF1Q92888 912 aaKnown RBP29.33■■■□□ 2.29
RPP38-207ENST00000616640 NBPF26B4DH59 902 aa29.32■■■□□ 2.28
RPP38-207ENST00000616640 NBPF10Q6P3W6 841 aaKnown RBP29.32■■■□□ 2.28
RPP38-207ENST00000616640 NBPF15Q8N660 670 aa29.32■■■□□ 2.28
RPP38-207ENST00000616640 MYL6BP14649 208 aa29.31■■■□□ 2.28
RPP38-207ENST00000616640 A0A087WZG4 1122 aa29.3■■■□□ 2.28
RPP38-207ENST00000616640 YTHDC1Q96MU7 727 aaKnown RBP29.3■■■□□ 2.28
RPP38-207ENST00000616640 ARXQ96QS3 562 aa29.3■■■□□ 2.28
RPP38-207ENST00000616640 CCDC30Q5VVM6 783 aa29.29■■■□□ 2.28
RPP38-207ENST00000616640 TRMT2AQ8IZ69 625 aaKnown RBP29.29■■■□□ 2.28
RPP38-207ENST00000616640 SLC16A10Q8TF71 515 aa29.29■■■□□ 2.28
RPP38-207ENST00000616640 BCORQ6W2J9 1755 aa29.28■■■□□ 2.28
RPP38-207ENST00000616640 SCN7AQ01118 1682 aa29.28■■■□□ 2.28
RPP38-207ENST00000616640 CHPF2Q9P2E5 772 aa29.28■■■□□ 2.28
RPP38-207ENST00000616640 DBF4Q9UBU7 674 aaPredicted RBP29.28■■■□□ 2.28
RPP38-207ENST00000616640 ZPR1O75312 459 aa29.27■■■□□ 2.28
RPP38-207ENST00000616640 DDX21Q9NR30 783 aaKnown RBP eCLIP29.27■■■□□ 2.28
RPP38-207ENST00000616640 ZBTB7AO95365 584 aa29.26■■■□□ 2.27
RPP38-207ENST00000616640 ANXA1P04083 346 aa29.26■■■□□ 2.27
RPP38-207ENST00000616640 VAMP4O75379 141 aa29.25■■■□□ 2.27
RPP38-207ENST00000616640 PDIA6Q15084 440 aa29.25■■■□□ 2.27
RPP38-207ENST00000616640 PROSER3Q2NL68 480 aa29.25■■■□□ 2.27
RPP38-207ENST00000616640 DZIP3Q86Y13 1208 aaKnown RBP29.25■■■□□ 2.27
RPP38-207ENST00000616640 STK31Q9BXU1 1019 aa29.25■■■□□ 2.27
RPP38-207ENST00000616640 TBC1D2BQ9UPU7 963 aa29.25■■■□□ 2.27
RPP38-207ENST00000616640 USP42Q9H9J4 1324 aaKnown RBP29.24■■■□□ 2.27
RPP38-207ENST00000616640 NUP98P52948 1817 aa29.24■■■□□ 2.27
RPP38-207ENST00000616640 MTFR1LQ9H019 292 aa29.24■■■□□ 2.27
RPP38-207ENST00000616640 SRP68Q9UHB9 627 aaKnown RBP29.24■■■□□ 2.27
RPP38-207ENST00000616640 NARFQ9UHQ1 456 aa29.24■■■□□ 2.27
RPP38-207ENST00000616640 COL24A1Q17RW2 1714 aa29.23■■■□□ 2.27
RPP38-207ENST00000616640 HYPKQ9NX55 129 aa29.22■■■□□ 2.27
RPP38-207ENST00000616640 USPL1Q5W0Q7 1092 aa29.21■■■□□ 2.27
RPP38-207ENST00000616640 MSL1Q68DK7 614 aa29.21■■■□□ 2.27
RPP38-207ENST00000616640 TCERG1O14776 1098 aaKnown RBP29.2■■■□□ 2.27
RPP38-207ENST00000616640 KIF6Q6ZMV9 814 aa29.2■■■□□ 2.27
RPP38-207ENST00000616640 ATF5Q9Y2D1 282 aaPredicted RBP29.2■■■□□ 2.27
RPP38-207ENST00000616640 GYS1P13807 737 aa29.2■■■□□ 2.26
RPP38-207ENST00000616640 LRP10Q7Z4F1 713 aa29.2■■■□□ 2.26
RPP38-207ENST00000616640 SRCAPQ6ZRS2 3230 aa29.19■■■□□ 2.26
RPP38-207ENST00000616640 AIMP1Q12904 312 aaKnown RBP29.19■■■□□ 2.26
RPP38-207ENST00000616640 TTLL7Q6ZT98 887 aa29.18■■■□□ 2.26
RPP38-207ENST00000616640 COPS6Q7L5N1 327 aa29.18■■■□□ 2.26
RPP38-207ENST00000616640 SPON1Q9HCB6 807 aa29.18■■■□□ 2.26
RPP38-207ENST00000616640 NLGN1Q8N2Q7 840 aa29.17■■■□□ 2.26
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms