RNA–Protein interactions for RNA: ENST00000597756.1

NOTCH3-204, Transcript of notch 3, humanhuman

TSL 2

Gene NOTCH3, Length 559 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3-204ENST00000597756 C4AP0C0L4 1744 aa16.5■□□□□ 0.23
NOTCH3-204ENST00000597756 SOS1Q07889 1333 aaPredicted RBP16.5■□□□□ 0.23
NOTCH3-204ENST00000597756 STARD3NLO95772 234 aa16.5■□□□□ 0.23
NOTCH3-204ENST00000597756 EIF4A1P60842 406 aaKnown RBP16.5■□□□□ 0.23
NOTCH3-204ENST00000597756 USP16Q9Y5T5 823 aa16.5■□□□□ 0.23
NOTCH3-204ENST00000597756 MSH5O43196 834 aa16.49■□□□□ 0.23
NOTCH3-204ENST00000597756 SNRPA1P09661 255 aaKnown RBP16.49■□□□□ 0.23
NOTCH3-204ENST00000597756 NCBP3Q53F19 620 aaKnown RBP16.49■□□□□ 0.23
NOTCH3-204ENST00000597756 ZBTB1Q9Y2K1 713 aa16.49■□□□□ 0.23
NOTCH3-204ENST00000597756 PRAMEF22A3QJZ6 481 aa16.48■□□□□ 0.23
NOTCH3-204ENST00000597756 CHL1O00533 1208 aa16.48■□□□□ 0.23
NOTCH3-204ENST00000597756 EIF5P55010 431 aaKnown RBP16.48■□□□□ 0.23
NOTCH3-204ENST00000597756 ARXQ96QS3 562 aa16.48■□□□□ 0.23
NOTCH3-204ENST00000597756 GIGYF1O75420 1035 aaPredicted RBP16.47■□□□□ 0.23
NOTCH3-204ENST00000597756 GYS1P13807 737 aa16.47■□□□□ 0.23
NOTCH3-204ENST00000597756 A1BGP04217 495 aa16.46■□□□□ 0.23
NOTCH3-204ENST00000597756 ZNF853P0CG23 659 aa16.46■□□□□ 0.23
NOTCH3-204ENST00000597756 POLD1P28340 1107 aa16.46■□□□□ 0.23
NOTCH3-204ENST00000597756 RFC4P35249 363 aa16.46■□□□□ 0.23
NOTCH3-204ENST00000597756 CCDC27Q2M243 656 aa16.46■□□□□ 0.23
NOTCH3-204ENST00000597756 MSL1Q68DK7 614 aa16.46■□□□□ 0.23
NOTCH3-204ENST00000597756 PPP1R1BQ9UD71 204 aaPredicted RBP16.46■□□□□ 0.23
NOTCH3-204ENST00000597756 USP42Q9H9J4 1324 aaKnown RBP16.45■□□□□ 0.22
NOTCH3-204ENST00000597756 IL6STP40189 918 aaPredicted RBP16.45■□□□□ 0.22
NOTCH3-204ENST00000597756 NLGN1Q8N2Q7 840 aa16.45■□□□□ 0.22
NOTCH3-204ENST00000597756 LAMB4A4D0S4 1761 aa16.44■□□□□ 0.22
NOTCH3-204ENST00000597756 COL15A1P39059 1388 aa16.44■□□□□ 0.22
NOTCH3-204ENST00000597756 CANXP27824 592 aaKnown RBP16.44■□□□□ 0.22
NOTCH3-204ENST00000597756 CFAP44Q96MT7 982 aa16.44■□□□□ 0.22
NOTCH3-204ENST00000597756 SYT17Q9BSW7 474 aa16.44■□□□□ 0.22
NOTCH3-204ENST00000597756 SRP68Q9UHB9 627 aaKnown RBP16.44■□□□□ 0.22
NOTCH3-204ENST00000597756 NARFQ9UHQ1 456 aa16.44■□□□□ 0.22
NOTCH3-204ENST00000597756 TSPYL4Q9UJ04 414 aa16.44■□□□□ 0.22
NOTCH3-204ENST00000597756 NBPF26B4DH59 902 aa16.43■□□□□ 0.22
NOTCH3-204ENST00000597756 NBPF10Q6P3W6 841 aaKnown RBP16.43■□□□□ 0.22
NOTCH3-204ENST00000597756 NBPF15Q8N660 670 aa16.43■□□□□ 0.22
NOTCH3-204ENST00000597756 FHDC1Q9C0D6 1143 aaPredicted RBP16.43■□□□□ 0.22
NOTCH3-204ENST00000597756 CCER2I3L3R5 266 aa16.42■□□□□ 0.22
NOTCH3-204ENST00000597756 TM4SF1P30408 202 aa16.42■□□□□ 0.22
NOTCH3-204ENST00000597756 BCL2L12Q9HB09 334 aa16.42■□□□□ 0.22
NOTCH3-204ENST00000597756 A0A087WZG4 1122 aa16.41■□□□□ 0.22
NOTCH3-204ENST00000597756 FKBP8Q14318 412 aa16.41■□□□□ 0.22
NOTCH3-204ENST00000597756 ZPR1O75312 459 aa16.4■□□□□ 0.22
NOTCH3-204ENST00000597756 USPL1Q5W0Q7 1092 aa16.4■□□□□ 0.22
NOTCH3-204ENST00000597756 WWC1Q8IX03 1113 aa16.4■□□□□ 0.22
NOTCH3-204ENST00000597756 FAM9BQ8IZU0 186 aa16.4■□□□□ 0.22
NOTCH3-204ENST00000597756 IFT57Q9NWB7 429 aa16.4■□□□□ 0.22
NOTCH3-204ENST00000597756 MMP10P09238 476 aa16.39■□□□□ 0.21
NOTCH3-204ENST00000597756 GNAI1P63096 354 aa16.39■□□□□ 0.21
NOTCH3-204ENST00000597756 CALD1Q05682 793 aaKnown RBP16.39■□□□□ 0.21
NOTCH3-204ENST00000597756 MBIPQ9NS73 344 aa16.39■□□□□ 0.21
NOTCH3-204ENST00000597756 KIF13BQ9NQT8 1826 aa16.39■□□□□ 0.21
NOTCH3-204ENST00000597756 PIP4K2AP48426 406 aaPredicted RBP16.38■□□□□ 0.21
NOTCH3-204ENST00000597756 PDIA6Q15084 440 aa16.38■□□□□ 0.21
NOTCH3-204ENST00000597756 DIEXFQ68CQ4 756 aaKnown RBP16.38■□□□□ 0.21
NOTCH3-204ENST00000597756 NGEFQ8N5V2 710 aa16.38■□□□□ 0.21
NOTCH3-204ENST00000597756 CD2APQ9Y5K6 639 aa16.38■□□□□ 0.21
NOTCH3-204ENST00000597756 ERBB4Q15303 1308 aa16.38■□□□□ 0.21
NOTCH3-204ENST00000597756 CAMTA2O94983 1202 aa16.37■□□□□ 0.21
NOTCH3-204ENST00000597756 KRT24Q2M2I5 525 aa16.37■□□□□ 0.21
NOTCH3-204ENST00000597756 LRP10Q7Z4F1 713 aa16.37■□□□□ 0.21
NOTCH3-204ENST00000597756 TBC1D2BQ9UPU7 963 aa16.37■□□□□ 0.21
NOTCH3-204ENST00000597756 LAS1LQ9Y4W2 734 aaKnown RBP16.37■□□□□ 0.21
NOTCH3-204ENST00000597756 BCORQ6W2J9 1755 aa16.36■□□□□ 0.21
NOTCH3-204ENST00000597756 AFDNP55196 1824 aaKnown RBP16.36■□□□□ 0.21
NOTCH3-204ENST00000597756 RGL2O15211 777 aa16.36■□□□□ 0.21
NOTCH3-204ENST00000597756 HOXB7P09629 217 aa16.36■□□□□ 0.21
NOTCH3-204ENST00000597756 DDR1Q08345 913 aa16.36■□□□□ 0.21
NOTCH3-204ENST00000597756 IL16Q14005 1332 aa16.36■□□□□ 0.21
NOTCH3-204ENST00000597756 SCN7AQ01118 1682 aa16.36■□□□□ 0.21
NOTCH3-204ENST00000597756 NRXN2Q9P2S2 1712 aa16.36■□□□□ 0.21
NOTCH3-204ENST00000597756 SENP3-EIF4A1A0A087X0R7 540 aa16.35■□□□□ 0.21
NOTCH3-204ENST00000597756 POLRMTO00411 1230 aaKnown RBP16.35■□□□□ 0.21
NOTCH3-204ENST00000597756 NFIXQ14938 502 aa16.35■□□□□ 0.21
NOTCH3-204ENST00000597756 CLEC4GQ6UXB4 293 aa16.35■□□□□ 0.21
NOTCH3-204ENST00000597756 DZIP3Q86Y13 1208 aaKnown RBP16.35■□□□□ 0.21
NOTCH3-204ENST00000597756 WDR63Q8IWG1 891 aa16.35■□□□□ 0.21
NOTCH3-204ENST00000597756 NLGN2Q8NFZ4 835 aa16.34■□□□□ 0.21
NOTCH3-204ENST00000597756 NUP98P52948 1817 aa16.33■□□□□ 0.21
NOTCH3-204ENST00000597756 MIER1Q8N108 512 aa16.33■□□□□ 0.2
NOTCH3-204ENST00000597756 ZNF330Q9Y3S2 320 aaPredicted RBP16.33■□□□□ 0.2
NOTCH3-204ENST00000597756 PARP3Q9Y6F1 533 aa16.33■□□□□ 0.2
NOTCH3-204ENST00000597756 KIAA1551Q9HCM1 1747 aa16.33■□□□□ 0.2
NOTCH3-204ENST00000597756 EIF2S2P20042 333 aaKnown RBP16.32■□□□□ 0.2
NOTCH3-204ENST00000597756 DUSP27Q5VZP5 1158 aa16.32■□□□□ 0.2
NOTCH3-204ENST00000597756 TBC1D9BQ66K14 1250 aa16.32■□□□□ 0.2
NOTCH3-204ENST00000597756 C10orf71Q711Q0 1435 aa16.32■□□□□ 0.2
NOTCH3-204ENST00000597756 NPM2Q86SE8 214 aaKnown RBP16.32■□□□□ 0.2
NOTCH3-204ENST00000597756 ZNF521Q96K83 1311 aa16.32■□□□□ 0.2
NOTCH3-204ENST00000597756 ERVV-1B6SEH8 477 aa16.31■□□□□ 0.2
NOTCH3-204ENST00000597756 PROSER3Q2NL68 480 aa16.31■□□□□ 0.2
NOTCH3-204ENST00000597756 C8orf58Q8NAV2 365 aa16.31■□□□□ 0.2
NOTCH3-204ENST00000597756 DDX21Q9NR30 783 aaKnown RBP eCLIP16.31■□□□□ 0.2
NOTCH3-204ENST00000597756 SERPINB2P05120 415 aa16.3■□□□□ 0.2
NOTCH3-204ENST00000597756 MYL6BP14649 208 aa16.3■□□□□ 0.2
NOTCH3-204ENST00000597756 TGFB2P61812 414 aa16.3■□□□□ 0.2
NOTCH3-204ENST00000597756 TTLL7Q6ZT98 887 aa16.3■□□□□ 0.2
NOTCH3-204ENST00000597756 SALL2Q9Y467 1007 aaPredicted RBP16.3■□□□□ 0.2
NOTCH3-204ENST00000597756 MAP3K15Q6ZN16 1313 aa16.29■□□□□ 0.2
NOTCH3-204ENST00000597756 HLFQ16534 295 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms